RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 IFNAR1P17181 557 aa22.67■■□□□ 1.22
CHMP2B-204ENST00000472024 CCT2P78371 535 aaKnown RBP22.67■■□□□ 1.22
CHMP2B-204ENST00000472024 FUT2Q10981 343 aa22.67■■□□□ 1.22
CHMP2B-204ENST00000472024 RAB3GAP1Q15042 981 aa22.67■■□□□ 1.22
CHMP2B-204ENST00000472024 DLK2Q6UY11 383 aa22.67■■□□□ 1.22
CHMP2B-204ENST00000472024 NCOA5Q9HCD5 579 aaKnown RBP22.67■■□□□ 1.22
CHMP2B-204ENST00000472024 STK36Q9NRP7 1315 aa22.66■■□□□ 1.22
CHMP2B-204ENST00000472024 A0A1W2PRG0 241 aa22.66■■□□□ 1.22
CHMP2B-204ENST00000472024 PDHBP11177 359 aa22.66■■□□□ 1.22
CHMP2B-204ENST00000472024 SMARCA1P28370 1054 aa22.66■■□□□ 1.22
CHMP2B-204ENST00000472024 KIF5BP33176 963 aa22.66■■□□□ 1.22
CHMP2B-204ENST00000472024 IREB2P48200 963 aaKnown RBP22.66■■□□□ 1.22
CHMP2B-204ENST00000472024 FKBP1BP68106 108 aa22.66■■□□□ 1.22
CHMP2B-204ENST00000472024 MAP3K9P80192 1104 aa22.66■■□□□ 1.22
CHMP2B-204ENST00000472024 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.66■■□□□ 1.22
CHMP2B-204ENST00000472024 TMTC3Q6ZXV5 915 aa22.66■■□□□ 1.22
CHMP2B-204ENST00000472024 SH2D4AQ9H788 454 aa22.66■■□□□ 1.22
CHMP2B-204ENST00000472024 ARHGEF10LQ9HCE6 1279 aa22.66■■□□□ 1.22
CHMP2B-204ENST00000472024 USP17L5A8MUK1 530 aa22.65■■□□□ 1.22
CHMP2B-204ENST00000472024 CDKL5O76039 1030 aa22.65■■□□□ 1.22
CHMP2B-204ENST00000472024 RXRAP19793 462 aa22.65■■□□□ 1.22
CHMP2B-204ENST00000472024 ADD1P35611 737 aaKnown RBP22.65■■□□□ 1.22
CHMP2B-204ENST00000472024 GNAQP50148 359 aa22.65■■□□□ 1.22
CHMP2B-204ENST00000472024 HMGN5P82970 282 aaKnown RBP22.65■■□□□ 1.22
CHMP2B-204ENST00000472024 CHADLQ6NUI6 762 aa22.65■■□□□ 1.22
CHMP2B-204ENST00000472024 LRRC47Q8N1G4 583 aaKnown RBP22.65■■□□□ 1.22
CHMP2B-204ENST00000472024 RGS22Q8NE09 1264 aa22.65■■□□□ 1.22
CHMP2B-204ENST00000472024 CTCFLQ8NI51 663 aaPredicted RBP22.65■■□□□ 1.22
CHMP2B-204ENST00000472024 DCAF4Q8WV16 495 aa22.65■■□□□ 1.22
CHMP2B-204ENST00000472024 GMCL1Q96IK5 515 aa22.65■■□□□ 1.22
CHMP2B-204ENST00000472024 LZTS2Q9BRK4 669 aa22.65■■□□□ 1.22
CHMP2B-204ENST00000472024 MAD2L2Q9UI95 211 aa22.65■■□□□ 1.22
CHMP2B-204ENST00000472024 PHIPQ8WWQ0 1821 aa22.65■■□□□ 1.22
CHMP2B-204ENST00000472024 ITGBL1O95965 494 aaPredicted RBP22.64■■□□□ 1.21
CHMP2B-204ENST00000472024 HSP90AA1P07900 732 aaKnown RBP22.64■■□□□ 1.21
CHMP2B-204ENST00000472024 PTPRAP18433 802 aa22.64■■□□□ 1.21
CHMP2B-204ENST00000472024 ASPRV1Q53RT3 343 aa22.64■■□□□ 1.21
CHMP2B-204ENST00000472024 LDLRAD1Q5T700 205 aa22.64■■□□□ 1.21
CHMP2B-204ENST00000472024 CPLX2Q6PUV4 134 aaKnown RBP22.64■■□□□ 1.21
CHMP2B-204ENST00000472024 NUP133Q8WUM0 1156 aa22.64■■□□□ 1.21
CHMP2B-204ENST00000472024 CIZ1Q9ULV3 898 aaPredicted RBP22.64■■□□□ 1.21
CHMP2B-204ENST00000472024 NAP1L2Q9ULW6 460 aaPredicted RBP22.64■■□□□ 1.21
CHMP2B-204ENST00000472024 SNCAIPQ9Y6H5 919 aa22.64■■□□□ 1.21
CHMP2B-204ENST00000472024 PTPDC1A2A3K4 754 aa22.63■■□□□ 1.21
CHMP2B-204ENST00000472024 NBPF11Q86T75 865 aa22.63■■□□□ 1.21
CHMP2B-204ENST00000472024 RAB11FIP4Q86YS3 637 aa22.63■■□□□ 1.21
CHMP2B-204ENST00000472024 ACER1Q8TDN7 264 aa22.63■■□□□ 1.21
CHMP2B-204ENST00000472024 ZKSCAN4Q969J2 545 aaPredicted RBP22.63■■□□□ 1.21
CHMP2B-204ENST00000472024 KIAA1683Q9H0B3 1180 aa22.63■■□□□ 1.21
CHMP2B-204ENST00000472024 SMC3Q9UQE7 1217 aa22.63■■□□□ 1.21
CHMP2B-204ENST00000472024 KIF3CO14782 793 aa22.62■■□□□ 1.21
CHMP2B-204ENST00000472024 CPLX1O14810 134 aa22.62■■□□□ 1.21
CHMP2B-204ENST00000472024 ZNF543Q08ER8 600 aa22.62■■□□□ 1.21
CHMP2B-204ENST00000472024 VGLL4Q14135 290 aa22.62■■□□□ 1.21
CHMP2B-204ENST00000472024 GPATCH4Q5T3I0 446 aaKnown RBP22.62■■□□□ 1.21
CHMP2B-204ENST00000472024 ARMC9Q7Z3E5 817 aa22.62■■□□□ 1.21
CHMP2B-204ENST00000472024 ANKRD13AQ8IZ07 590 aa22.62■■□□□ 1.21
CHMP2B-204ENST00000472024 VCPKMTQ9H867 229 aa22.62■■□□□ 1.21
CHMP2B-204ENST00000472024 AS3MTQ9HBK9 375 aa22.62■■□□□ 1.21
CHMP2B-204ENST00000472024 PICK1Q9NRD5 415 aa22.62■■□□□ 1.21
CHMP2B-204ENST00000472024 F5H6K3 240 aa22.61■■□□□ 1.21
CHMP2B-204ENST00000472024 TRAF5O00463 557 aa22.61■■□□□ 1.21
CHMP2B-204ENST00000472024 JAK2O60674 1132 aa22.61■■□□□ 1.21
CHMP2B-204ENST00000472024 FMNL1O95466 1100 aaPredicted RBP22.61■■□□□ 1.21
CHMP2B-204ENST00000472024 NDUFB10O96000 172 aa22.61■■□□□ 1.21
CHMP2B-204ENST00000472024 PARP1P09874 1014 aaKnown RBP22.61■■□□□ 1.21
CHMP2B-204ENST00000472024 PDIA4P13667 645 aaKnown RBP22.61■■□□□ 1.21
CHMP2B-204ENST00000472024 FDPSP14324 419 aaKnown RBP22.61■■□□□ 1.21
CHMP2B-204ENST00000472024 ECE1P42892 770 aa22.61■■□□□ 1.21
CHMP2B-204ENST00000472024 KLRC3Q07444 240 aa22.61■■□□□ 1.21
CHMP2B-204ENST00000472024 SLFN13Q68D06 897 aa22.61■■□□□ 1.21
CHMP2B-204ENST00000472024 CCDC144CPQ8IYA2 1237 aa22.61■■□□□ 1.21
CHMP2B-204ENST00000472024 ZNF526Q8TF50 670 aaPredicted RBP22.61■■□□□ 1.21
CHMP2B-204ENST00000472024 SPZ1Q9BXG8 430 aa22.61■■□□□ 1.21
CHMP2B-204ENST00000472024 RNF26Q9BY78 433 aaPredicted RBP22.61■■□□□ 1.21
CHMP2B-204ENST00000472024 GPBP1L1Q9HC44 474 aaPredicted RBP22.61■■□□□ 1.21
CHMP2B-204ENST00000472024 FZD1Q9UP38 647 aa22.61■■□□□ 1.21
CHMP2B-204ENST00000472024 CNTNAP5Q8WYK1 1306 aa22.6■■□□□ 1.21
CHMP2B-204ENST00000472024 GJB2P29033 226 aa22.6■■□□□ 1.21
CHMP2B-204ENST00000472024 LPAR1Q92633 364 aa22.6■■□□□ 1.21
CHMP2B-204ENST00000472024 C12orf42Q96LP6 360 aa22.6■■□□□ 1.21
CHMP2B-204ENST00000472024 GOPCQ9HD26 462 aa22.6■■□□□ 1.21
CHMP2B-204ENST00000472024 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.6■■□□□ 1.21
CHMP2B-204ENST00000472024 PLA2G6O60733 806 aa22.59■■□□□ 1.21
CHMP2B-204ENST00000472024 PLEKHA8P1O95397 391 aa22.59■■□□□ 1.21
CHMP2B-204ENST00000472024 ATP2B2Q01814 1243 aa22.59■■□□□ 1.21
CHMP2B-204ENST00000472024 SLC35G1Q2M3R5 365 aa22.59■■□□□ 1.21
CHMP2B-204ENST00000472024 BTNL9Q6UXG8 535 aa22.59■■□□□ 1.21
CHMP2B-204ENST00000472024 STAG2Q8N3U4 1231 aa22.59■■□□□ 1.21
CHMP2B-204ENST00000472024 SRBD1Q8N5C6 995 aaKnown RBP22.59■■□□□ 1.21
CHMP2B-204ENST00000472024 ZNF280CQ8ND82 737 aa22.59■■□□□ 1.21
CHMP2B-204ENST00000472024 RBM27Q9P2N5 1060 aaKnown RBP22.59■■□□□ 1.21
CHMP2B-204ENST00000472024 KIF3AQ9Y496 699 aa22.59■■□□□ 1.21
CHMP2B-204ENST00000472024 AFG3L2Q9Y4W6 797 aa22.59■■□□□ 1.21
CHMP2B-204ENST00000472024 CSADQ9Y600 493 aa22.59■■□□□ 1.21
CHMP2B-204ENST00000472024 PASKQ96RG2 1323 aa22.58■■□□□ 1.21
CHMP2B-204ENST00000472024 SPDYE5A6NIY4 337 aa22.58■■□□□ 1.21
CHMP2B-204ENST00000472024 PRPF3O43395 683 aaKnown RBP22.58■■□□□ 1.21
CHMP2B-204ENST00000472024 USP14P54578 494 aa22.58■■□□□ 1.21
CHMP2B-204ENST00000472024 SH3D19Q5HYK7 790 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms