RNA–Protein interactions for RNA: ENST00000471751.5

SNX4-203, Transcript of sorting nexin 4, humanhuman

TSL 2

Gene SNX4, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-203ENST00000471751 FANCBQ8NB91 859 aa22.16■■□□□ 1.14
SNX4-203ENST00000471751 GTF3C6Q969F1 213 aa22.16■■□□□ 1.14
SNX4-203ENST00000471751 LZTS2Q9BRK4 669 aa22.16■■□□□ 1.14
SNX4-203ENST00000471751 PAPPA2Q9BXP8 1791 aa22.16■■□□□ 1.14
SNX4-203ENST00000471751 C19orf81C9J6K1 198 aa22.15■■□□□ 1.14
SNX4-203ENST00000471751 SNHG28P0DPA3 235 aa22.15■■□□□ 1.14
SNX4-203ENST00000471751 PTPRAP18433 802 aa22.15■■□□□ 1.14
SNX4-203ENST00000471751 METAP2P50579 478 aaKnown RBP eCLIP22.15■■□□□ 1.14
SNX4-203ENST00000471751 USP14P54578 494 aa22.15■■□□□ 1.14
SNX4-203ENST00000471751 FMR1Q06787 632 aaKnown RBP eCLIP22.15■■□□□ 1.14
SNX4-203ENST00000471751 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.15■■□□□ 1.14
SNX4-203ENST00000471751 CTCFLQ8NI51 663 aaPredicted RBP22.15■■□□□ 1.14
SNX4-203ENST00000471751 GPHNQ9NQX3 736 aaPredicted RBP22.15■■□□□ 1.14
SNX4-203ENST00000471751 CDKL5O76039 1030 aa22.14■■□□□ 1.14
SNX4-203ENST00000471751 JAG1P78504 1218 aa22.14■■□□□ 1.14
SNX4-203ENST00000471751 PPATQ06203 517 aa22.14■■□□□ 1.14
SNX4-203ENST00000471751 GPATCH4Q5T3I0 446 aaKnown RBP22.14■■□□□ 1.14
SNX4-203ENST00000471751 ERO1BQ86YB8 467 aa22.14■■□□□ 1.14
SNX4-203ENST00000471751 RGS22Q8NE09 1264 aa22.14■■□□□ 1.14
SNX4-203ENST00000471751 LPAR1Q92633 364 aa22.14■■□□□ 1.14
SNX4-203ENST00000471751 KIAA1683Q9H0B3 1180 aa22.14■■□□□ 1.14
SNX4-203ENST00000471751 GBA2Q9HCG7 927 aaPredicted RBP22.14■■□□□ 1.14
SNX4-203ENST00000471751 GOPCQ9HD26 462 aa22.14■■□□□ 1.14
SNX4-203ENST00000471751 HPS5Q9UPZ3 1129 aa22.14■■□□□ 1.14
SNX4-203ENST00000471751 GOLGA8BA8MQT2 603 aa22.13■■□□□ 1.13
SNX4-203ENST00000471751 DCAF4Q8WV16 495 aa22.13■■□□□ 1.13
SNX4-203ENST00000471751 GMCL1Q96IK5 515 aa22.13■■□□□ 1.13
SNX4-203ENST00000471751 SENP2Q9HC62 589 aa22.13■■□□□ 1.13
SNX4-203ENST00000471751 CWC22Q9HCG8 908 aaKnown RBP22.13■■□□□ 1.13
SNX4-203ENST00000471751 PASKQ96RG2 1323 aa22.13■■□□□ 1.13
SNX4-203ENST00000471751 USP17L10C9JJH3 530 aa22.12■■□□□ 1.13
SNX4-203ENST00000471751 TTLL12Q14166 644 aaPredicted RBP22.12■■□□□ 1.13
SNX4-203ENST00000471751 GRM4Q14833 912 aa22.12■■□□□ 1.13
SNX4-203ENST00000471751 RTN1Q16799 776 aa22.12■■□□□ 1.13
SNX4-203ENST00000471751 ASPRV1Q53RT3 343 aa22.12■■□□□ 1.13
SNX4-203ENST00000471751 ZNF280CQ8ND82 737 aa22.12■■□□□ 1.13
SNX4-203ENST00000471751 ZKSCAN4Q969J2 545 aaPredicted RBP22.12■■□□□ 1.13
SNX4-203ENST00000471751 CREBZFQ9NS37 354 aa22.12■■□□□ 1.13
SNX4-203ENST00000471751 RBM27Q9P2N5 1060 aaKnown RBP22.12■■□□□ 1.13
SNX4-203ENST00000471751 GOLGA8AA7E2F4 631 aa22.11■■□□□ 1.13
SNX4-203ENST00000471751 PLA2G6O60733 806 aa22.11■■□□□ 1.13
SNX4-203ENST00000471751 HMGN5P82970 282 aaKnown RBP22.11■■□□□ 1.13
SNX4-203ENST00000471751 SCRN1Q12765 414 aa22.11■■□□□ 1.13
SNX4-203ENST00000471751 VGLL4Q14135 290 aa22.11■■□□□ 1.13
SNX4-203ENST00000471751 MICU3Q86XE3 530 aa22.11■■□□□ 1.13
SNX4-203ENST00000471751 VCPKMTQ9H867 229 aa22.11■■□□□ 1.13
SNX4-203ENST00000471751 SNCAIPQ9Y6H5 919 aa22.11■■□□□ 1.13
SNX4-203ENST00000471751 PALM3A6NDB9 673 aaPredicted RBP22.1■■□□□ 1.13
SNX4-203ENST00000471751 SPDYE5A6NIY4 337 aa22.1■■□□□ 1.13
SNX4-203ENST00000471751 F5H6K3 240 aa22.1■■□□□ 1.13
SNX4-203ENST00000471751 TRAF5O00463 557 aa22.1■■□□□ 1.13
SNX4-203ENST00000471751 CXCL11O14625 94 aa22.1■■□□□ 1.13
SNX4-203ENST00000471751 CPLX1O14810 134 aa22.1■■□□□ 1.13
SNX4-203ENST00000471751 CELF2O95319 508 aaKnown RBP22.1■■□□□ 1.13
SNX4-203ENST00000471751 HSP90AA1P07900 732 aaKnown RBP22.1■■□□□ 1.13
SNX4-203ENST00000471751 PARP1P09874 1014 aaKnown RBP22.1■■□□□ 1.13
SNX4-203ENST00000471751 PDHBP11177 359 aa22.1■■□□□ 1.13
SNX4-203ENST00000471751 IFNAR1P17181 557 aa22.1■■□□□ 1.13
SNX4-203ENST00000471751 BACE1P56817 501 aa22.1■■□□□ 1.13
SNX4-203ENST00000471751 KLRC3Q07444 240 aa22.1■■□□□ 1.13
SNX4-203ENST00000471751 SH3D19Q5HYK7 790 aa22.1■■□□□ 1.13
SNX4-203ENST00000471751 C12orf42Q96LP6 360 aa22.1■■□□□ 1.13
SNX4-203ENST00000471751 KIF3AQ9Y496 699 aa22.1■■□□□ 1.13
SNX4-203ENST00000471751 AFG3L2Q9Y4W6 797 aa22.1■■□□□ 1.13
SNX4-203ENST00000471751 A0A1W2PRG0 241 aa22.09■■□□□ 1.13
SNX4-203ENST00000471751 TMEM88BA6NKF7 163 aa22.09■■□□□ 1.13
SNX4-203ENST00000471751 ATP2B2Q01814 1243 aa22.09■■□□□ 1.13
SNX4-203ENST00000471751 NUP133Q8WUM0 1156 aa22.09■■□□□ 1.13
SNX4-203ENST00000471751 FAM217BQ9NTX9 383 aaPredicted RBP22.09■■□□□ 1.13
SNX4-203ENST00000471751 NAP1L2Q9ULW6 460 aaPredicted RBP22.09■■□□□ 1.13
SNX4-203ENST00000471751 ZHX2Q9Y6X8 837 aa22.09■■□□□ 1.13
SNX4-203ENST00000471751 PHIPQ8WWQ0 1821 aa22.09■■□□□ 1.13
SNX4-203ENST00000471751 LARGE1O95461 756 aa22.08■■□□□ 1.13
SNX4-203ENST00000471751 SLFN13Q68D06 897 aa22.08■■□□□ 1.13
SNX4-203ENST00000471751 USP17L2Q6R6M4 530 aa22.08■■□□□ 1.13
SNX4-203ENST00000471751 DLK2Q6UY11 383 aa22.08■■□□□ 1.13
SNX4-203ENST00000471751 NOL8Q76FK4 1167 aaKnown RBP22.08■■□□□ 1.13
SNX4-203ENST00000471751 SLC10A4Q96EP9 437 aa22.08■■□□□ 1.13
SNX4-203ENST00000471751 LARP6Q9BRS8 491 aaKnown RBP22.08■■□□□ 1.13
SNX4-203ENST00000471751 SLC1A4P43007 532 aa22.07■■□□□ 1.12
SNX4-203ENST00000471751 CCT2P78371 535 aaKnown RBP22.07■■□□□ 1.12
SNX4-203ENST00000471751 ZNF543Q08ER8 600 aa22.07■■□□□ 1.12
SNX4-203ENST00000471751 PPIL2Q13356 520 aa22.07■■□□□ 1.12
SNX4-203ENST00000471751 PRKG1Q13976 671 aa22.07■■□□□ 1.12
SNX4-203ENST00000471751 NTRK3Q16288 839 aa22.07■■□□□ 1.12
SNX4-203ENST00000471751 SHROOM1Q2M3G4 852 aaPredicted RBP22.07■■□□□ 1.12
SNX4-203ENST00000471751 CST9Q5W186 159 aa22.07■■□□□ 1.12
SNX4-203ENST00000471751 CCDC83Q8IWF9 413 aa22.07■■□□□ 1.12
SNX4-203ENST00000471751 FAM177A1Q8N128 213 aaPredicted RBP22.07■■□□□ 1.12
SNX4-203ENST00000471751 JMYQ8N9B5 988 aa22.07■■□□□ 1.12
SNX4-203ENST00000471751 SMARCC2Q8TAQ2 1214 aa22.07■■□□□ 1.12
SNX4-203ENST00000471751 HHIPL1Q96JK4 782 aa22.07■■□□□ 1.12
SNX4-203ENST00000471751 MAD2L2Q9UI95 211 aa22.07■■□□□ 1.12
SNX4-203ENST00000471751 KCNH4Q9UQ05 1017 aa22.07■■□□□ 1.12
SNX4-203ENST00000471751 OTOFQ9HC10 1997 aa22.07■■□□□ 1.12
SNX4-203ENST00000471751 STK36Q9NRP7 1315 aa22.07■■□□□ 1.12
SNX4-203ENST00000471751 WDR46O15213 610 aaKnown RBP22.06■■□□□ 1.12
SNX4-203ENST00000471751 CDC27P30260 824 aa22.06■■□□□ 1.12
SNX4-203ENST00000471751 SPP2Q13103 211 aa22.06■■□□□ 1.12
SNX4-203ENST00000471751 STK3Q13188 491 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms