RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 PDGFAP04085 211 aa4.23□□□□□ -1.73
SCN3A-207ENST00000471697 HSP90AA1P07900 732 aaKnown RBP4.23□□□□□ -1.73
SCN3A-207ENST00000471697 COL6A1P12109 1028 aa4.23□□□□□ -1.73
SCN3A-207ENST00000471697 GNA15P30679 374 aa4.23□□□□□ -1.73
SCN3A-207ENST00000471697 MAN1A1P33908 653 aa4.23□□□□□ -1.73
SCN3A-207ENST00000471697 CHMP4BP1P59074 171 aa4.23□□□□□ -1.73
SCN3A-207ENST00000471697 DNM1Q05193 864 aaKnown RBP4.23□□□□□ -1.73
SCN3A-207ENST00000471697 POU5F1BQ06416 359 aa4.23□□□□□ -1.73
SCN3A-207ENST00000471697 HDAC1Q13547 482 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-207ENST00000471697 AAMPQ13685 434 aa4.23□□□□□ -1.73
SCN3A-207ENST00000471697 HLTFQ14527 1009 aaKnown RBP eCLIP4.23□□□□□ -1.73
SCN3A-207ENST00000471697 ENOX2Q16206 610 aaKnown RBP4.23□□□□□ -1.73
SCN3A-207ENST00000471697 NFE2Q16621 373 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-207ENST00000471697 ALG1LQ6GMV1 187 aa4.23□□□□□ -1.73
SCN3A-207ENST00000471697 ATG14Q6ZNE5 492 aa4.23□□□□□ -1.73
SCN3A-207ENST00000471697 GGNQ86UU5 652 aa4.23□□□□□ -1.73
SCN3A-207ENST00000471697 C1orf127Q8N9H9 656 aa4.23□□□□□ -1.73
SCN3A-207ENST00000471697 RASGRP4Q8TDF6 673 aa4.23□□□□□ -1.73
SCN3A-207ENST00000471697 APPBP2Q92624 585 aa4.23□□□□□ -1.73
SCN3A-207ENST00000471697 BORCS6Q96GS4 357 aa4.23□□□□□ -1.73
SCN3A-207ENST00000471697 CRELD1Q96HD1 420 aa4.23□□□□□ -1.73
SCN3A-207ENST00000471697 KIRREL1Q96J84 757 aa4.23□□□□□ -1.73
SCN3A-207ENST00000471697 FAM129BQ96TA1 746 aa4.23□□□□□ -1.73
SCN3A-207ENST00000471697 OSMRQ99650 979 aa4.23□□□□□ -1.73
SCN3A-207ENST00000471697 NAP1L4Q99733 375 aaKnown RBP4.23□□□□□ -1.73
SCN3A-207ENST00000471697 ZNF700Q9H0M5 742 aa4.23□□□□□ -1.73
SCN3A-207ENST00000471697 PRDM7Q9NQW5 492 aa4.23□□□□□ -1.73
SCN3A-207ENST00000471697 FANCLQ9NW38 375 aa4.23□□□□□ -1.73
SCN3A-207ENST00000471697 MAP3K20Q9NYL2 800 aaKnown RBP4.23□□□□□ -1.73
SCN3A-207ENST00000471697 ANAPC4Q9UJX5 808 aa4.23□□□□□ -1.73
SCN3A-207ENST00000471697 POLIQ9UNA4 740 aa4.23□□□□□ -1.73
SCN3A-207ENST00000471697 SCINQ9Y6U3 715 aa4.23□□□□□ -1.73
SCN3A-207ENST00000471697 SETD1BQ9UPS6 1966 aaKnown RBP4.22□□□□□ -1.73
SCN3A-207ENST00000471697 TCAF2A6NFQ2 919 aa4.22□□□□□ -1.73
SCN3A-207ENST00000471697 PLIN1O60240 522 aa4.22□□□□□ -1.73
SCN3A-207ENST00000471697 CYP11A1P05108 521 aa4.22□□□□□ -1.73
SCN3A-207ENST00000471697 RPLP1P05386 114 aaKnown RBP4.22□□□□□ -1.73
SCN3A-207ENST00000471697 NEFMP07197 916 aa4.22□□□□□ -1.73
SCN3A-207ENST00000471697 CTSBP07858 339 aa4.22□□□□□ -1.73
SCN3A-207ENST00000471697 CD53P19397 219 aa4.22□□□□□ -1.73
SCN3A-207ENST00000471697 MAOBP27338 520 aa4.22□□□□□ -1.73
SCN3A-207ENST00000471697 NFKB2Q00653 900 aa4.22□□□□□ -1.73
SCN3A-207ENST00000471697 PAK2Q13177 524 aa4.22□□□□□ -1.73
SCN3A-207ENST00000471697 MAPRE1Q15691 268 aaKnown RBP4.22□□□□□ -1.73
SCN3A-207ENST00000471697 TMEM67Q5HYA8 995 aa4.22□□□□□ -1.73
SCN3A-207ENST00000471697 AKAP4Q5JQC9 854 aa4.22□□□□□ -1.73
SCN3A-207ENST00000471697 ZNF280DQ6N043 979 aa4.22□□□□□ -1.73
SCN3A-207ENST00000471697 KRT26Q7Z3Y9 468 aa4.22□□□□□ -1.73
SCN3A-207ENST00000471697 ZNF438Q7Z4V0 828 aa4.22□□□□□ -1.73
SCN3A-207ENST00000471697 RAVER1Q8IY67 606 aaKnown RBP4.22□□□□□ -1.73
SCN3A-207ENST00000471697 ASB11Q8WXH4 323 aa4.22□□□□□ -1.73
SCN3A-207ENST00000471697 TSR2Q969E8 191 aaKnown RBP4.22□□□□□ -1.73
SCN3A-207ENST00000471697 SEC16BQ96JE7 1060 aa4.22□□□□□ -1.73
SCN3A-207ENST00000471697 YTHDC1Q96MU7 727 aaKnown RBP4.22□□□□□ -1.73
SCN3A-207ENST00000471697 SETDB2Q96T68 719 aa4.22□□□□□ -1.73
SCN3A-207ENST00000471697 ZKSCAN3Q9BRR0 538 aa4.22□□□□□ -1.73
SCN3A-207ENST00000471697 CHRDQ9H2X0 955 aa4.22□□□□□ -1.73
SCN3A-207ENST00000471697 TMPRSS5Q9H3S3 457 aa4.22□□□□□ -1.73
SCN3A-207ENST00000471697 ARNT2Q9HBZ2 717 aa4.22□□□□□ -1.73
SCN3A-207ENST00000471697 CCDC87Q9NVE4 849 aa4.22□□□□□ -1.73
SCN3A-207ENST00000471697 SNTG2Q9NY99 539 aa4.22□□□□□ -1.73
SCN3A-207ENST00000471697 AP4E1Q9UPM8 1137 aa4.22□□□□□ -1.73
SCN3A-207ENST00000471697 FAM221BA6H8Z2 402 aa4.21□□□□□ -1.74
SCN3A-207ENST00000471697 KLF4O43474 513 aa4.21□□□□□ -1.74
SCN3A-207ENST00000471697 NUAK1O60285 661 aa4.21□□□□□ -1.74
SCN3A-207ENST00000471697 FZD6O60353 706 aa4.21□□□□□ -1.74
SCN3A-207ENST00000471697 SRFP11831 508 aa4.21□□□□□ -1.74
SCN3A-207ENST00000471697 MZF1P28698 734 aaPredicted RBP4.21□□□□□ -1.74
SCN3A-207ENST00000471697 COPB2P35606 906 aa4.21□□□□□ -1.74
SCN3A-207ENST00000471697 ZP2Q05996 745 aa4.21□□□□□ -1.74
SCN3A-207ENST00000471697 CDK5R2Q13319 367 aa4.21□□□□□ -1.74
SCN3A-207ENST00000471697 RASA3Q14644 834 aa4.21□□□□□ -1.74
SCN3A-207ENST00000471697 C8orf34Q49A92 452 aa4.21□□□□□ -1.74
SCN3A-207ENST00000471697 HS2ST1Q7LGA3 356 aa4.21□□□□□ -1.74
SCN3A-207ENST00000471697 SDR16C5Q8N3Y7 309 aa4.21□□□□□ -1.74
SCN3A-207ENST00000471697 LILRB2Q8N423 598 aa4.21□□□□□ -1.74
SCN3A-207ENST00000471697 CXorf38Q8TB03 319 aa4.21□□□□□ -1.74
SCN3A-207ENST00000471697 TMC1Q8TDI8 760 aa4.21□□□□□ -1.74
SCN3A-207ENST00000471697 SH3TC2Q8TF17 1288 aa4.21□□□□□ -1.74
SCN3A-207ENST00000471697 PPM1EQ8WY54 764 aa4.21□□□□□ -1.74
SCN3A-207ENST00000471697 GPRASP2Q96D09 838 aa4.21□□□□□ -1.74
SCN3A-207ENST00000471697 NSUN3Q9H649 340 aaKnown RBP4.21□□□□□ -1.74
SCN3A-207ENST00000471697 KANSL2Q9H9L4 492 aa4.21□□□□□ -1.74
SCN3A-207ENST00000471697 SMG5Q9UPR3 1016 aaKnown RBP4.21□□□□□ -1.74
SCN3A-207ENST00000471697 USP31Q70CQ4 1352 aa4.2□□□□□ -1.74
SCN3A-207ENST00000471697 GPR182O15218 404 aa4.2□□□□□ -1.74
SCN3A-207ENST00000471697 TSPAN6O43657 245 aa4.2□□□□□ -1.74
SCN3A-207ENST00000471697 KRT18P05783 430 aaKnown RBP4.2□□□□□ -1.74
SCN3A-207ENST00000471697 LINC00310P59036 64 aa4.2□□□□□ -1.74
SCN3A-207ENST00000471697 RAB33AQ14088 237 aa4.2□□□□□ -1.74
SCN3A-207ENST00000471697 POU4F3Q15319 338 aa4.2□□□□□ -1.74
SCN3A-207ENST00000471697 BRDTQ58F21 947 aaPredicted RBP4.2□□□□□ -1.74
SCN3A-207ENST00000471697 SYCP2LQ5T4T6 812 aa4.2□□□□□ -1.74
SCN3A-207ENST00000471697 EFCAB2Q5VUJ9 269 aa4.2□□□□□ -1.74
SCN3A-207ENST00000471697 CYFIP1Q7L576 1253 aa4.2□□□□□ -1.74
SCN3A-207ENST00000471697 HOMER1Q86YM7 354 aa4.2□□□□□ -1.74
SCN3A-207ENST00000471697 WDR75Q8IWA0 830 aaKnown RBP4.2□□□□□ -1.74
SCN3A-207ENST00000471697 SVIPQ8NHG7 77 aa4.2□□□□□ -1.74
SCN3A-207ENST00000471697 KCNC2Q96PR1 638 aa4.2□□□□□ -1.74
SCN3A-207ENST00000471697 DEPDC7Q96QD5 511 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms