RNA–Protein interactions for RNA: ENST00000471682.1

COMMD6-208, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-208ENST00000471682 HOXA7P31268 230 aaPredicted RBP17.97■□□□□ 0.47
COMMD6-208ENST00000471682 PABPC4Q13310 644 aaKnown RBP eCLIP17.97■□□□□ 0.475e-7■□□□□ 10
COMMD6-208ENST00000471682 CLEC10AQ8IUN9 316 aa17.97■□□□□ 0.47
COMMD6-208ENST00000471682 GMCL1P1Q8NEA9 526 aa17.97■□□□□ 0.47
COMMD6-208ENST00000471682 NKX2-3Q8TAU0 364 aa17.97■□□□□ 0.47
COMMD6-208ENST00000471682 TMEM87BQ96K49 555 aa17.97■□□□□ 0.47
COMMD6-208ENST00000471682 PTPN18Q99952 460 aa17.97■□□□□ 0.47
COMMD6-208ENST00000471682 TM6SF1Q9BZW5 370 aa17.97■□□□□ 0.47
COMMD6-208ENST00000471682 EMILIN3Q9NT22 766 aa17.97■□□□□ 0.47
COMMD6-208ENST00000471682 CLIP2Q9UDT6 1046 aa17.97■□□□□ 0.47
COMMD6-208ENST00000471682 LOC285556D6RIA3 1793 aa17.96■□□□□ 0.47
COMMD6-208ENST00000471682 CA12O43570 354 aa17.96■□□□□ 0.47
COMMD6-208ENST00000471682 NMT2O60551 498 aa17.96■□□□□ 0.47
COMMD6-208ENST00000471682 ATP2B2Q01814 1243 aa17.96■□□□□ 0.47
COMMD6-208ENST00000471682 RCSD1Q6JBY9 416 aa17.96■□□□□ 0.47
COMMD6-208ENST00000471682 CYB5R4Q7L1T6 521 aa17.96■□□□□ 0.47
COMMD6-208ENST00000471682 DHX32Q7L7V1 743 aaKnown RBP17.96■□□□□ 0.47
COMMD6-208ENST00000471682 CFHR5Q9BXR6 569 aa17.96■□□□□ 0.47
COMMD6-208ENST00000471682 TNKSO95271 1327 aa17.96■□□□□ 0.46
COMMD6-208ENST00000471682 ERICH2A1L162 156 aa17.95■□□□□ 0.46
COMMD6-208ENST00000471682 BTBD19C9JJ37 291 aa17.95■□□□□ 0.46
COMMD6-208ENST00000471682 WDR46O15213 610 aaKnown RBP17.95■□□□□ 0.46
COMMD6-208ENST00000471682 SEC23AQ15436 765 aa17.95■□□□□ 0.46
COMMD6-208ENST00000471682 GPAT2Q6NUI2 795 aa17.95■□□□□ 0.46
COMMD6-208ENST00000471682 TMTC2Q8N394 836 aa17.95■□□□□ 0.46
COMMD6-208ENST00000471682 ENAHQ8N8S7 591 aaPredicted RBP17.95■□□□□ 0.46
COMMD6-208ENST00000471682 UPF2Q9HAU5 1272 aaKnown RBP17.95■□□□□ 0.46
COMMD6-208ENST00000471682 SAGE1Q9NXZ1 904 aa17.95■□□□□ 0.46
COMMD6-208ENST00000471682 MYH4Q9Y623 1939 aa17.94■□□□□ 0.46
COMMD6-208ENST00000471682 F5H6K3 240 aa17.94■□□□□ 0.46
COMMD6-208ENST00000471682 IGF2BP3O00425 579 aaKnown RBP eCLIP17.94■□□□□ 0.46
COMMD6-208ENST00000471682 VCAM1P19320 739 aa17.94■□□□□ 0.46
COMMD6-208ENST00000471682 ANTXR2P58335 489 aa17.94■□□□□ 0.46
COMMD6-208ENST00000471682 EXOSC10Q01780 885 aaKnown RBP17.94■□□□□ 0.46
COMMD6-208ENST00000471682 KLRC3Q07444 240 aa17.94■□□□□ 0.46
COMMD6-208ENST00000471682 ADCK5Q3MIX3 580 aa17.94■□□□□ 0.46
COMMD6-208ENST00000471682 GADL1Q6ZQY3 521 aa17.94■□□□□ 0.46
COMMD6-208ENST00000471682 FBXL16Q8N461 479 aa17.94■□□□□ 0.46
COMMD6-208ENST00000471682 TMEM47Q9BQJ4 181 aa17.94■□□□□ 0.46
COMMD6-208ENST00000471682 BACH2Q9BYV9 841 aa17.94■□□□□ 0.46
COMMD6-208ENST00000471682 PNMA3Q9UL41 463 aa17.94■□□□□ 0.46
COMMD6-208ENST00000471682 USP17L15C9J2P7 530 aa17.93■□□□□ 0.46
COMMD6-208ENST00000471682 USP17L13C9JLJ4 530 aa17.93■□□□□ 0.46
COMMD6-208ENST00000471682 USP17L11C9JVI0 530 aa17.93■□□□□ 0.46
COMMD6-208ENST00000471682 USP17L18D6R9N7 530 aa17.93■□□□□ 0.46
COMMD6-208ENST00000471682 USP17L22D6RA61 530 aa17.93■□□□□ 0.46
COMMD6-208ENST00000471682 USP17L17D6RBQ6 530 aa17.93■□□□□ 0.46
COMMD6-208ENST00000471682 USP17L19D6RCP7 530 aa17.93■□□□□ 0.46
COMMD6-208ENST00000471682 USP17L20D6RJB6 530 aa17.93■□□□□ 0.46
COMMD6-208ENST00000471682 IFIT3O14879 490 aaKnown RBP17.93■□□□□ 0.46
COMMD6-208ENST00000471682 PRC1O43663 620 aa17.93■□□□□ 0.46
COMMD6-208ENST00000471682 LIFRP42702 1097 aa17.93■□□□□ 0.46
COMMD6-208ENST00000471682 USP17L24Q0WX57 530 aa17.93■□□□□ 0.46
COMMD6-208ENST00000471682 IFIT1BQ5T764 474 aaKnown RBP17.93■□□□□ 0.46
COMMD6-208ENST00000471682 BLOC1S2Q6QNY1 142 aa17.93■□□□□ 0.46
COMMD6-208ENST00000471682 FAM43AQ8N2R8 423 aa17.93■□□□□ 0.46
COMMD6-208ENST00000471682 IGDCC4Q8TDY8 1250 aa17.93■□□□□ 0.46
COMMD6-208ENST00000471682 GMCL1Q96IK5 515 aa17.93■□□□□ 0.46
COMMD6-208ENST00000471682 JAKMIP1Q96N16 626 aaKnown RBP17.93■□□□□ 0.46
COMMD6-208ENST00000471682 ZKSCAN3Q9BRR0 538 aa17.93■□□□□ 0.46
COMMD6-208ENST00000471682 BEGAINQ9BUH8 593 aa17.93■□□□□ 0.46
COMMD6-208ENST00000471682 ZSWIM6Q9HCJ5 1215 aa17.93■□□□□ 0.46
COMMD6-208ENST00000471682 WBP1LQ9NX94 342 aa17.93■□□□□ 0.46
COMMD6-208ENST00000471682 PDHXO00330 501 aa17.92■□□□□ 0.46
COMMD6-208ENST00000471682 NDUFB10O96000 172 aa17.92■□□□□ 0.46
COMMD6-208ENST00000471682 OSBPP22059 807 aa17.92■□□□□ 0.46
COMMD6-208ENST00000471682 RBM25P49756 843 aaKnown RBP17.92■□□□□ 0.46
COMMD6-208ENST00000471682 WTAPQ15007 396 aa17.92■□□□□ 0.46
COMMD6-208ENST00000471682 TMEM67Q5HYA8 995 aa17.92■□□□□ 0.46
COMMD6-208ENST00000471682 TREML2Q5T2D2 321 aa17.92■□□□□ 0.46
COMMD6-208ENST00000471682 LRRC47Q8N1G4 583 aaKnown RBP17.92■□□□□ 0.46
COMMD6-208ENST00000471682 IL27Q8NEV9 243 aa17.92■□□□□ 0.46
COMMD6-208ENST00000471682 PARK7Q99497 189 aaKnown RBP17.92■□□□□ 0.46
COMMD6-208ENST00000471682 KAT14Q9H8E8 782 aa17.92■□□□□ 0.46
COMMD6-208ENST00000471682 SNHG28P0DPA3 235 aa17.91■□□□□ 0.46
COMMD6-208ENST00000471682 ZYXQ15942 572 aaKnown RBP17.91■□□□□ 0.46
COMMD6-208ENST00000471682 NOM1Q5C9Z4 860 aaKnown RBP17.91■□□□□ 0.46
COMMD6-208ENST00000471682 SLFN13Q68D06 897 aa17.91■□□□□ 0.46
COMMD6-208ENST00000471682 CATSPERGQ6ZRH7 1159 aa17.91■□□□□ 0.46
COMMD6-208ENST00000471682 PNMA1Q8ND90 353 aa17.91■□□□□ 0.46
COMMD6-208ENST00000471682 GTF3C2Q8WUA4 911 aaPredicted RBP17.91■□□□□ 0.46
COMMD6-208ENST00000471682 DCAF4Q8WV16 495 aa17.91■□□□□ 0.46
COMMD6-208ENST00000471682 RPAP3Q9H6T3 665 aaPredicted RBP17.91■□□□□ 0.46
COMMD6-208ENST00000471682 RNF186Q9NXI6 227 aa17.91■□□□□ 0.46
COMMD6-208ENST00000471682 MYPNQ86TC9 1320 aa17.91■□□□□ 0.46
COMMD6-208ENST00000471682 SH2B2O14492 632 aaPredicted RBP17.9■□□□□ 0.46
COMMD6-208ENST00000471682 PLA2G6O60733 806 aa17.9■□□□□ 0.46
COMMD6-208ENST00000471682 CASTP20810 708 aaKnown RBP17.9■□□□□ 0.46
COMMD6-208ENST00000471682 RPS6KB1P23443 525 aa17.9■□□□□ 0.46
COMMD6-208ENST00000471682 DGKZQ13574 1117 aa17.9■□□□□ 0.46
COMMD6-208ENST00000471682 KIAA1755Q5JYT7 1200 aa17.9■□□□□ 0.46
COMMD6-208ENST00000471682 LBX2Q6XYB7 198 aa17.9■□□□□ 0.46
COMMD6-208ENST00000471682 RUFY3Q7L099 469 aa17.9■□□□□ 0.46
COMMD6-208ENST00000471682 SGMS1Q86VZ5 419 aa17.9■□□□□ 0.46
COMMD6-208ENST00000471682 C22orf23Q9BZE7 217 aa17.9■□□□□ 0.46
COMMD6-208ENST00000471682 LY9Q9HBG7 655 aa17.9■□□□□ 0.46
COMMD6-208ENST00000471682 ZFYVE28Q9HCC9 887 aa17.9■□□□□ 0.46
COMMD6-208ENST00000471682 CYP46A1Q9Y6A2 500 aa17.9■□□□□ 0.46
COMMD6-208ENST00000471682 BMP3P12645 472 aa17.89■□□□□ 0.45
COMMD6-208ENST00000471682 SLC1A4P43007 532 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms