RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 CST9Q5W186 159 aa13.59□□□□□ -0.23
FN1-217ENST00000471193 CATIPQ7Z7H3 387 aa13.59□□□□□ -0.23
FN1-217ENST00000471193 MICU3Q86XE3 530 aa13.59□□□□□ -0.23
FN1-217ENST00000471193 C2orf69Q8N8R5 385 aa13.59□□□□□ -0.23
FN1-217ENST00000471193 GMCL1P1Q8NEA9 526 aa13.59□□□□□ -0.23
FN1-217ENST00000471193 ACER1Q8TDN7 264 aa13.59□□□□□ -0.23
FN1-217ENST00000471193 CLMNQ96JQ2 1002 aa13.59□□□□□ -0.23
FN1-217ENST00000471193 WDR18Q9BV38 432 aa13.59□□□□□ -0.23
FN1-217ENST00000471193 SH2D4AQ9H788 454 aa13.59□□□□□ -0.23
FN1-217ENST00000471193 AS3MTQ9HBK9 375 aa13.59□□□□□ -0.23
FN1-217ENST00000471193 TMX2Q9Y320 296 aa13.59□□□□□ -0.23
FN1-217ENST00000471193 SPDYE5A6NIY4 337 aa13.58□□□□□ -0.24
FN1-217ENST00000471193 GOLGA8AA7E2F4 631 aa13.58□□□□□ -0.24
FN1-217ENST00000471193 UBE2Q2LH0YL09 131 aa13.58□□□□□ -0.24
FN1-217ENST00000471193 CALM1P0DP23 149 aa13.58□□□□□ -0.24
FN1-217ENST00000471193 CALM2P0DP24 149 aa13.58□□□□□ -0.24
FN1-217ENST00000471193 CALM3P0DP25 149 aa13.58□□□□□ -0.24
FN1-217ENST00000471193 SNHG28P0DPA3 235 aa13.58□□□□□ -0.24
FN1-217ENST00000471193 RXRAP19793 462 aa13.58□□□□□ -0.24
FN1-217ENST00000471193 METAP2P50579 478 aaKnown RBP eCLIP13.58□□□□□ -0.24
FN1-217ENST00000471193 FSTL1Q12841 308 aa13.58□□□□□ -0.24
FN1-217ENST00000471193 SYNE3Q6ZMZ3 975 aa13.58□□□□□ -0.24
FN1-217ENST00000471193 RASGRP2Q7LDG7 609 aa13.58□□□□□ -0.24
FN1-217ENST00000471193 RAB11FIP4Q86YS3 637 aa13.58□□□□□ -0.24
FN1-217ENST00000471193 GTF3C6Q969F1 213 aa13.58□□□□□ -0.24
FN1-217ENST00000471193 ELP3Q9H9T3 547 aa13.58□□□□□ -0.24
FN1-217ENST00000471193 NAP1L2Q9ULW6 460 aaPredicted RBP13.58□□□□□ -0.24
FN1-217ENST00000471193 PPATQ06203 517 aa13.57□□□□□ -0.24
FN1-217ENST00000471193 SCRN1Q12765 414 aa13.57□□□□□ -0.24
FN1-217ENST00000471193 STK3Q13188 491 aa13.57□□□□□ -0.24
FN1-217ENST00000471193 GRM4Q14833 912 aa13.57□□□□□ -0.24
FN1-217ENST00000471193 ERO1BQ86YB8 467 aa13.57□□□□□ -0.24
FN1-217ENST00000471193 ZNF280CQ8ND82 737 aa13.57□□□□□ -0.24
FN1-217ENST00000471193 NUP133Q8WUM0 1156 aa13.57□□□□□ -0.24
FN1-217ENST00000471193 MAP3K14Q99558 947 aa13.57□□□□□ -0.24
FN1-217ENST00000471193 KIAA1683Q9H0B3 1180 aa13.57□□□□□ -0.24
FN1-217ENST00000471193 SLKQ9H2G2 1235 aaPredicted RBP13.57□□□□□ -0.24
FN1-217ENST00000471193 VCPKMTQ9H867 229 aa13.57□□□□□ -0.24
FN1-217ENST00000471193 ZHX2Q9Y6X8 837 aa13.57□□□□□ -0.24
FN1-217ENST00000471193 LOC285556D6RIA3 1793 aa13.57□□□□□ -0.24
FN1-217ENST00000471193 NDUFB10O96000 172 aa13.56□□□□□ -0.24
FN1-217ENST00000471193 PDHBP11177 359 aa13.56□□□□□ -0.24
FN1-217ENST00000471193 PPIL2Q13356 520 aa13.56□□□□□ -0.24
FN1-217ENST00000471193 MTMR2Q13614 643 aa13.56□□□□□ -0.24
FN1-217ENST00000471193 CUL4AQ13619 759 aa13.56□□□□□ -0.24
FN1-217ENST00000471193 RTN1Q16799 776 aa13.56□□□□□ -0.24
FN1-217ENST00000471193 CCDC144CPQ8IYA2 1237 aa13.56□□□□□ -0.24
FN1-217ENST00000471193 NECAB1Q8N987 351 aa13.56□□□□□ -0.24
FN1-217ENST00000471193 CNKSR2Q8WXI2 1034 aa13.56□□□□□ -0.24
FN1-217ENST00000471193 GMCL1Q96IK5 515 aa13.56□□□□□ -0.24
FN1-217ENST00000471193 FEZ1Q99689 392 aa13.56□□□□□ -0.24
FN1-217ENST00000471193 NCOA5Q9HCD5 579 aaKnown RBP13.56□□□□□ -0.24
FN1-217ENST00000471193 GOPCQ9HD26 462 aa13.56□□□□□ -0.24
FN1-217ENST00000471193 AFG3L2Q9Y4W6 797 aa13.56□□□□□ -0.24
FN1-217ENST00000471193 TRIM75PA6NK02 468 aa13.55□□□□□ -0.24
FN1-217ENST00000471193 USP17L10C9JJH3 530 aa13.55□□□□□ -0.24
FN1-217ENST00000471193 F5H6K3 240 aa13.55□□□□□ -0.24
FN1-217ENST00000471193 CDC27P30260 824 aa13.55□□□□□ -0.24
FN1-217ENST00000471193 USP14P54578 494 aa13.55□□□□□ -0.24
FN1-217ENST00000471193 BACE1P56817 501 aa13.55□□□□□ -0.24
FN1-217ENST00000471193 CCT2P78371 535 aaKnown RBP13.55□□□□□ -0.24
FN1-217ENST00000471193 KLRC3Q07444 240 aa13.55□□□□□ -0.24
FN1-217ENST00000471193 SPP2Q13103 211 aa13.55□□□□□ -0.24
FN1-217ENST00000471193 PPP2R5BQ15173 497 aa13.55□□□□□ -0.24
FN1-217ENST00000471193 ASPRV1Q53RT3 343 aa13.55□□□□□ -0.24
FN1-217ENST00000471193 SLFN13Q68D06 897 aa13.55□□□□□ -0.24
FN1-217ENST00000471193 CCDC83Q8IWF9 413 aa13.55□□□□□ -0.24
FN1-217ENST00000471193 FANCBQ8NB91 859 aa13.55□□□□□ -0.24
FN1-217ENST00000471193 CTCFLQ8NI51 663 aaPredicted RBP13.55□□□□□ -0.24
FN1-217ENST00000471193 DCAF4Q8WV16 495 aa13.55□□□□□ -0.24
FN1-217ENST00000471193 OPTNQ96CV9 577 aa13.55□□□□□ -0.24
FN1-217ENST00000471193 OTUD5Q96G74 571 aa13.55□□□□□ -0.24
FN1-217ENST00000471193 C12orf42Q96LP6 360 aa13.55□□□□□ -0.24
FN1-217ENST00000471193 FAM217BQ9NTX9 383 aaPredicted RBP13.55□□□□□ -0.24
FN1-217ENST00000471193 RBM28Q9NW13 759 aaKnown RBP13.55□□□□□ -0.24
FN1-217ENST00000471193 MAD2L2Q9UI95 211 aa13.55□□□□□ -0.24
FN1-217ENST00000471193 MTMR7Q9Y216 660 aa13.55□□□□□ -0.24
FN1-217ENST00000471193 PTPRFP10586 1907 aa13.54□□□□□ -0.24
FN1-217ENST00000471193 PALM3A6NDB9 673 aaPredicted RBP13.54□□□□□ -0.24
FN1-217ENST00000471193 PARP1P09874 1014 aaKnown RBP13.54□□□□□ -0.24
FN1-217ENST00000471193 KIF5BP33176 963 aa13.54□□□□□ -0.24
FN1-217ENST00000471193 GJA5P36382 358 aa13.54□□□□□ -0.24
FN1-217ENST00000471193 HUNKP57058 714 aa13.54□□□□□ -0.24
FN1-217ENST00000471193 ZNF543Q08ER8 600 aa13.54□□□□□ -0.24
FN1-217ENST00000471193 ZYXQ15942 572 aaKnown RBP13.54□□□□□ -0.24
FN1-217ENST00000471193 SH3D19Q5HYK7 790 aa13.54□□□□□ -0.24
FN1-217ENST00000471193 KIAA1755Q5JYT7 1200 aa13.54□□□□□ -0.24
FN1-217ENST00000471193 TMTC3Q6ZXV5 915 aa13.54□□□□□ -0.24
FN1-217ENST00000471193 SAPCD2Q86UD0 394 aa13.54□□□□□ -0.24
FN1-217ENST00000471193 LPAR1Q92633 364 aa13.54□□□□□ -0.24
FN1-217ENST00000471193 KCNH4Q9UQ05 1017 aa13.54□□□□□ -0.24
FN1-217ENST00000471193 TLL2Q9Y6L7 1015 aa13.54□□□□□ -0.24
FN1-217ENST00000471193 CCDC196A0A1B0GTZ2 297 aa13.53□□□□□ -0.24
FN1-217ENST00000471193 C19orf81C9J6K1 198 aa13.53□□□□□ -0.24
FN1-217ENST00000471193 IRF6O14896 467 aa13.53□□□□□ -0.24
FN1-217ENST00000471193 WDR46O15213 610 aaKnown RBP13.53□□□□□ -0.24
FN1-217ENST00000471193 RAD21O60216 631 aa13.53□□□□□ -0.24
FN1-217ENST00000471193 PLEKHA8P1O95397 391 aa13.53□□□□□ -0.24
FN1-217ENST00000471193 CTDNEP1O95476 244 aa13.53□□□□□ -0.24
FN1-217ENST00000471193 ADD1P35611 737 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms