RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 NCOA3Q9Y6Q9 1424 aa15.8■□□□□ 0.12
HDAC7-219ENST00000470668 TMEM2Q9UHN6 1383 aa15.8■□□□□ 0.12
HDAC7-219ENST00000470668 PLA2G4AP47712 749 aa15.8■□□□□ 0.12
HDAC7-219ENST00000470668 CETN1Q12798 172 aa15.8■□□□□ 0.12
HDAC7-219ENST00000470668 NNTQ13423 1086 aa15.8■□□□□ 0.12
HDAC7-219ENST00000470668 SF3B2Q13435 895 aaKnown RBP15.8■□□□□ 0.12
HDAC7-219ENST00000470668 SPATS2Q86XZ4 545 aaKnown RBP15.8■□□□□ 0.12
HDAC7-219ENST00000470668 UTP11Q9Y3A2 253 aaKnown RBP15.8■□□□□ 0.12
HDAC7-219ENST00000470668 SYNMO15061 1565 aa15.8■□□□□ 0.12
HDAC7-219ENST00000470668 FGAP02671 866 aa15.8■□□□□ 0.12
HDAC7-219ENST00000470668 ZAP70P43403 619 aa15.8■□□□□ 0.12
HDAC7-219ENST00000470668 GCKRQ14397 625 aa15.8■□□□□ 0.12
HDAC7-219ENST00000470668 CEP63Q96MT8 703 aa15.8■□□□□ 0.12
HDAC7-219ENST00000470668 EXOC5O00471 708 aa15.8■□□□□ 0.12
HDAC7-219ENST00000470668 TCP1P17987 556 aaKnown RBP15.8■□□□□ 0.12
HDAC7-219ENST00000470668 COPB1P53618 953 aaKnown RBP15.8■□□□□ 0.12
HDAC7-219ENST00000470668 CCDC63Q8NA47 563 aa15.8■□□□□ 0.12
HDAC7-219ENST00000470668 ARMT1Q9H993 441 aa15.8■□□□□ 0.12
HDAC7-219ENST00000470668 EPB41L5Q9HCM4 733 aa15.8■□□□□ 0.12
HDAC7-219ENST00000470668 KCNK3O14649 394 aa15.79■□□□□ 0.12
HDAC7-219ENST00000470668 GGCXP38435 758 aa15.79■□□□□ 0.12
HDAC7-219ENST00000470668 MTF1Q14872 753 aa15.79■□□□□ 0.12
HDAC7-219ENST00000470668 PROSER3Q2NL68 480 aa15.79■□□□□ 0.12
HDAC7-219ENST00000470668 NBPF14Q5TI25 921 aa15.79■□□□□ 0.12
HDAC7-219ENST00000470668 SYCP3Q8IZU3 236 aa15.79■□□□□ 0.12
HDAC7-219ENST00000470668 XAGE2Q96GT9 111 aa15.79■□□□□ 0.12
HDAC7-219ENST00000470668 SUGCTQ9HAC7 445 aa15.79■□□□□ 0.12
HDAC7-219ENST00000470668 DBNLQ9UJU6 430 aaKnown RBP15.79■□□□□ 0.12
HDAC7-219ENST00000470668 CHD1O14646 1710 aa15.79■□□□□ 0.12
HDAC7-219ENST00000470668 VSNL1P62760 191 aa15.79■□□□□ 0.12
HDAC7-219ENST00000470668 TOB2Q14106 344 aaPredicted RBP15.79■□□□□ 0.12
HDAC7-219ENST00000470668 KRT79Q5XKE5 535 aa15.79■□□□□ 0.12
HDAC7-219ENST00000470668 DYMQ7RTS9 669 aa15.79■□□□□ 0.12
HDAC7-219ENST00000470668 DHX40Q8IX18 779 aaKnown RBP15.79■□□□□ 0.12
HDAC7-219ENST00000470668 GIGYF1O75420 1035 aaPredicted RBP15.79■□□□□ 0.12
HDAC7-219ENST00000470668 ADAT2Q7Z6V5 191 aaKnown RBP15.79■□□□□ 0.12
HDAC7-219ENST00000470668 RIN2Q8WYP3 895 aaPredicted RBP15.79■□□□□ 0.12
HDAC7-219ENST00000470668 DPF2Q92785 391 aa15.79■□□□□ 0.12
HDAC7-219ENST00000470668 STMN2Q93045 179 aa15.79■□□□□ 0.12
HDAC7-219ENST00000470668 MAN1B1Q9UKM7 699 aa15.79■□□□□ 0.12
HDAC7-219ENST00000470668 HIP1RO75146 1068 aa15.78■□□□□ 0.12
HDAC7-219ENST00000470668 RPAP1Q9BWH6 1393 aaPredicted RBP15.78■□□□□ 0.12
HDAC7-219ENST00000470668 ROBO2Q9HCK4 1378 aa15.78■□□□□ 0.12
HDAC7-219ENST00000470668 CHUKO15111 745 aa15.78■□□□□ 0.12
HDAC7-219ENST00000470668 ALDH3A1P30838 453 aa15.78■□□□□ 0.12
HDAC7-219ENST00000470668 TSNAXIP1Q2TAA8 658 aa15.78■□□□□ 0.12
HDAC7-219ENST00000470668 PPP1R14CQ8TAE6 165 aa15.78■□□□□ 0.12
HDAC7-219ENST00000470668 TBC1D5Q92609 795 aa15.78■□□□□ 0.12
HDAC7-219ENST00000470668 KRT12Q99456 494 aa15.78■□□□□ 0.12
HDAC7-219ENST00000470668 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.78■□□□□ 0.12
HDAC7-219ENST00000470668 IKBKGQ9Y6K9 419 aa15.78■□□□□ 0.12
HDAC7-219ENST00000470668 KIF23Q02241 960 aaPredicted RBP15.78■□□□□ 0.12
HDAC7-219ENST00000470668 KLHL30Q0D2K2 578 aa15.78■□□□□ 0.12
HDAC7-219ENST00000470668 TEX11Q8IYF3 940 aa15.78■□□□□ 0.12
HDAC7-219ENST00000470668 TRIML1Q8N9V2 468 aa15.78■□□□□ 0.12
HDAC7-219ENST00000470668 PLVAPQ9BX97 442 aa15.78■□□□□ 0.12
HDAC7-219ENST00000470668 RBM28Q9NW13 759 aaKnown RBP15.78■□□□□ 0.12
HDAC7-219ENST00000470668 ZCCHC11Q5TAX3 1644 aaKnown RBP15.78■□□□□ 0.12
HDAC7-219ENST00000470668 TRPM1Q7Z4N2 1603 aa15.78■□□□□ 0.12
HDAC7-219ENST00000470668 HEXIM1O94992 359 aaKnown RBP15.77■□□□□ 0.12
HDAC7-219ENST00000470668 ZNF287Q9HBT7 754 aa15.77■□□□□ 0.12
HDAC7-219ENST00000470668 TPX2Q9ULW0 747 aaKnown RBP15.77■□□□□ 0.12
HDAC7-219ENST00000470668 RGS16O15492 202 aaPredicted RBP15.77■□□□□ 0.12
HDAC7-219ENST00000470668 ACTN4O43707 911 aaKnown RBP15.77■□□□□ 0.12
HDAC7-219ENST00000470668 POTEJP0CG39 1038 aa15.77■□□□□ 0.12
HDAC7-219ENST00000470668 ZNF131P52739 623 aa15.77■□□□□ 0.12
HDAC7-219ENST00000470668 EHHADHQ08426 723 aa15.77■□□□□ 0.12
HDAC7-219ENST00000470668 UIMC1Q96RL1 719 aa15.77■□□□□ 0.12
HDAC7-219ENST00000470668 METTL22Q9BUU2 404 aaPredicted RBP15.77■□□□□ 0.12
HDAC7-219ENST00000470668 CXorf56Q9H5V9 222 aa15.77■□□□□ 0.12
HDAC7-219ENST00000470668 AK9Q5TCS8 1911 aa15.77■□□□□ 0.12
HDAC7-219ENST00000470668 TBCAO75347 108 aaKnown RBP15.77■□□□□ 0.11
HDAC7-219ENST00000470668 GUCY2CP25092 1073 aa15.77■□□□□ 0.11
HDAC7-219ENST00000470668 SESN3P58005 492 aa15.77■□□□□ 0.11
HDAC7-219ENST00000470668 PTCH1Q13635 1447 aa15.77■□□□□ 0.11
HDAC7-219ENST00000470668 NAA35Q5VZE5 725 aa15.77■□□□□ 0.11
HDAC7-219ENST00000470668 GSTA5Q7RTV2 222 aa15.77■□□□□ 0.11
HDAC7-219ENST00000470668 KLHL34Q8N239 644 aa15.77■□□□□ 0.11
HDAC7-219ENST00000470668 LRRC27Q9C0I9 530 aa15.77■□□□□ 0.11
HDAC7-219ENST00000470668 IQCGQ9H095 443 aaKnown RBP15.77■□□□□ 0.11
HDAC7-219ENST00000470668 TNNI2P48788 182 aa15.77■□□□□ 0.11
HDAC7-219ENST00000470668 PLCB3Q01970 1234 aa15.77■□□□□ 0.11
HDAC7-219ENST00000470668 RBBP5Q15291 538 aaKnown RBP15.77■□□□□ 0.11
HDAC7-219ENST00000470668 PEX26Q7Z412 305 aa15.77■□□□□ 0.11
HDAC7-219ENST00000470668 FMR1NBQ8N0W7 255 aaPredicted RBP15.77■□□□□ 0.11
HDAC7-219ENST00000470668 SMC6Q96SB8 1091 aa15.77■□□□□ 0.11
HDAC7-219ENST00000470668 CLTCL1P53675 1640 aa15.77■□□□□ 0.11
HDAC7-219ENST00000470668 ENOX1Q8TC92 643 aaKnown RBP15.76■□□□□ 0.11
HDAC7-219ENST00000470668 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.76■□□□□ 0.11
HDAC7-219ENST00000470668 ATP6V0A2Q9Y487 856 aa15.76■□□□□ 0.11
HDAC7-219ENST00000470668 ZFYVE16Q7Z3T8 1539 aa15.76■□□□□ 0.11
HDAC7-219ENST00000470668 DNM2P50570 870 aa15.76■□□□□ 0.11
HDAC7-219ENST00000470668 EPHB4P54760 987 aa15.76■□□□□ 0.11
HDAC7-219ENST00000470668 CSRNP2Q9H175 543 aa15.76■□□□□ 0.11
HDAC7-219ENST00000470668 IL25Q9H293 177 aa15.76■□□□□ 0.11
HDAC7-219ENST00000470668 MRFAP1Q9Y605 127 aa15.76■□□□□ 0.11
HDAC7-219ENST00000470668 N4BP1O75113 896 aaKnown RBP15.76■□□□□ 0.11
HDAC7-219ENST00000470668 GBP1P32455 592 aa15.76■□□□□ 0.11
HDAC7-219ENST00000470668 NYAP1Q6ZVC0 841 aa15.76■□□□□ 0.11
HDAC7-219ENST00000470668 SV2BQ7L1I2 683 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms