RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 TEKT1Q969V4 418 aa19.47■□□□□ 0.71
SMARCD3-206ENST00000470588 PPP1R1BQ9UD71 204 aaPredicted RBP19.47■□□□□ 0.71
SMARCD3-206ENST00000470588 DAGLAQ9Y4D2 1042 aa19.47■□□□□ 0.71
SMARCD3-206ENST00000470588 FLT1P17948 1338 aa19.46■□□□□ 0.71
SMARCD3-206ENST00000470588 FOCADQ5VW36 1801 aa19.46■□□□□ 0.71
SMARCD3-206ENST00000470588 AP5Z1O43299 807 aa19.46■□□□□ 0.71
SMARCD3-206ENST00000470588 GRM4Q14833 912 aa19.46■□□□□ 0.71
SMARCD3-206ENST00000470588 NEDD1Q8NHV4 660 aa19.46■□□□□ 0.71
SMARCD3-206ENST00000470588 CABP5Q9NP86 173 aa19.46■□□□□ 0.71
SMARCD3-206ENST00000470588 ZKSCAN5Q9Y2L8 839 aa19.46■□□□□ 0.71
SMARCD3-206ENST00000470588 SCG2P13521 617 aa19.45■□□□□ 0.7
SMARCD3-206ENST00000470588 PTPREP23469 700 aa19.45■□□□□ 0.7
SMARCD3-206ENST00000470588 PLCB2Q00722 1185 aa19.45■□□□□ 0.7
SMARCD3-206ENST00000470588 PFKFB3Q16875 520 aaPredicted RBP19.45■□□□□ 0.7
SMARCD3-206ENST00000470588 HHIPL2Q6UWX4 724 aa19.45■□□□□ 0.7
SMARCD3-206ENST00000470588 ZNF579Q8NAF0 562 aaKnown RBP19.45■□□□□ 0.7
SMARCD3-206ENST00000470588 SHISA4Q96DD7 197 aa19.45■□□□□ 0.7
SMARCD3-206ENST00000470588 CD2APQ9Y5K6 639 aa19.45■□□□□ 0.7
SMARCD3-206ENST00000470588 PSME4Q14997 1843 aa19.45■□□□□ 0.7
SMARCD3-206ENST00000470588 IQCB1Q15051 598 aa19.44■□□□□ 0.7
SMARCD3-206ENST00000470588 ELOA2Q8IYF1 753 aaPredicted RBP19.44■□□□□ 0.7
SMARCD3-206ENST00000470588 LZTS2Q9BRK4 669 aa19.44■□□□□ 0.7
SMARCD3-206ENST00000470588 NAT10Q9H0A0 1025 aaKnown RBP19.44■□□□□ 0.7
SMARCD3-206ENST00000470588 SH3GLB2Q9NR46 395 aa19.44■□□□□ 0.7
SMARCD3-206ENST00000470588 BRCA1P38398 1863 aaKnown RBP19.44■□□□□ 0.7
SMARCD3-206ENST00000470588 MYH1P12882 1939 aa19.44■□□□□ 0.7
SMARCD3-206ENST00000470588 SCN9AQ15858 1988 aa19.44■□□□□ 0.7
SMARCD3-206ENST00000470588 hCG_1642624A0A1W2PR95 340 aa19.44■□□□□ 0.7
SMARCD3-206ENST00000470588 BMP15O95972 392 aa19.44■□□□□ 0.7
SMARCD3-206ENST00000470588 DACT2Q5SW24 774 aa19.44■□□□□ 0.7
SMARCD3-206ENST00000470588 LARGE2Q8N3Y3 721 aa19.44■□□□□ 0.7
SMARCD3-206ENST00000470588 SLC44A5Q8NCS7 719 aa19.44■□□□□ 0.7
SMARCD3-206ENST00000470588 CLIC6Q96NY7 704 aa19.44■□□□□ 0.7
SMARCD3-206ENST00000470588 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.44■□□□□ 0.7
SMARCD3-206ENST00000470588 PCDHB6Q9Y5E3 794 aa19.44■□□□□ 0.7
SMARCD3-206ENST00000470588 SRPRBQ9Y5M8 271 aaKnown RBP19.44■□□□□ 0.7
SMARCD3-206ENST00000470588 ZNF646O15015 1829 aaPredicted RBP19.44■□□□□ 0.7
SMARCD3-206ENST00000470588 PSDA5PKW4 1024 aaPredicted RBP19.43■□□□□ 0.7
SMARCD3-206ENST00000470588 TRIM75PA6NK02 468 aa19.43■□□□□ 0.7
SMARCD3-206ENST00000470588 GOLGA6L19H0YKK7 550 aa19.43■□□□□ 0.7
SMARCD3-206ENST00000470588 TPM3P06753 285 aa19.43■□□□□ 0.7
SMARCD3-206ENST00000470588 HDLBPQ00341 1268 aaKnown RBP19.43■□□□□ 0.7
SMARCD3-206ENST00000470588 ZRSR1Q15695 479 aaKnown RBP19.43■□□□□ 0.7
SMARCD3-206ENST00000470588 TMEM47Q9BQJ4 181 aa19.43■□□□□ 0.7
SMARCD3-206ENST00000470588 MXD3Q9BW11 206 aa19.43■□□□□ 0.7
SMARCD3-206ENST00000470588 MRIQ9BWK5 157 aa19.43■□□□□ 0.7
SMARCD3-206ENST00000470588 FAM13BQ9NYF5 915 aa19.43■□□□□ 0.7
SMARCD3-206ENST00000470588 FBXO2Q9UK22 296 aaPredicted RBP19.43■□□□□ 0.7
SMARCD3-206ENST00000470588 DDX60LQ5H9U9 1706 aaKnown RBP19.43■□□□□ 0.7
SMARCD3-206ENST00000470588 SCNN1DP51172 638 aa19.42■□□□□ 0.7
SMARCD3-206ENST00000470588 C11orf57Q6ZUT1 292 aaPredicted RBP19.42■□□□□ 0.7
SMARCD3-206ENST00000470588 CEP57L1Q8IYX8 460 aa19.42■□□□□ 0.7
SMARCD3-206ENST00000470588 TNFRSF25Q93038 417 aa19.42■□□□□ 0.7
SMARCD3-206ENST00000470588 MAD2L2Q9UI95 211 aa19.42■□□□□ 0.7
SMARCD3-206ENST00000470588 KCNH3Q9ULD8 1083 aa19.42■□□□□ 0.7
SMARCD3-206ENST00000470588 MYO3BQ8WXR4 1341 aa19.42■□□□□ 0.7
SMARCD3-206ENST00000470588 ZNF500O60304 480 aaPredicted RBP19.42■□□□□ 0.7
SMARCD3-206ENST00000470588 CALML3P27482 149 aa19.42■□□□□ 0.7
SMARCD3-206ENST00000470588 CRKP46108 304 aa19.42■□□□□ 0.7
SMARCD3-206ENST00000470588 NLRP12P59046 1061 aa19.42■□□□□ 0.7
SMARCD3-206ENST00000470588 NLRP5P59047 1200 aa19.42■□□□□ 0.7
SMARCD3-206ENST00000470588 NPY5RQ15761 445 aa19.42■□□□□ 0.7
SMARCD3-206ENST00000470588 FAM177A1Q8N128 213 aaPredicted RBP19.42■□□□□ 0.7
SMARCD3-206ENST00000470588 PALM3A6NDB9 673 aaPredicted RBP19.41■□□□□ 0.7
SMARCD3-206ENST00000470588 GOLGA6L6A8MZA4 724 aa19.41■□□□□ 0.7
SMARCD3-206ENST00000470588 NOVP48745 357 aa19.41■□□□□ 0.7
SMARCD3-206ENST00000470588 KIAA0825Q8IV33 1275 aa19.41■□□□□ 0.7
SMARCD3-206ENST00000470588 NIM1KQ8IY84 436 aa19.41■□□□□ 0.7
SMARCD3-206ENST00000470588 BPIFA3Q9BQP9 254 aa19.41■□□□□ 0.7
SMARCD3-206ENST00000470588 KCNQ5Q9NR82 932 aa19.41■□□□□ 0.7
SMARCD3-206ENST00000470588 USP40Q9NVE5 1235 aa19.41■□□□□ 0.7
SMARCD3-206ENST00000470588 TOP1P11387 765 aaKnown RBP19.4■□□□□ 0.7
SMARCD3-206ENST00000470588 TRAPPC10P48553 1259 aa19.4■□□□□ 0.7
SMARCD3-206ENST00000470588 RBM5P52756 815 aaKnown RBP eCLIP19.4■□□□□ 0.7
SMARCD3-206ENST00000470588 STAG2Q8N3U4 1231 aa19.4■□□□□ 0.7
SMARCD3-206ENST00000470588 SGIP1Q9BQI5 828 aa19.4■□□□□ 0.7
SMARCD3-206ENST00000470588 ZNF277Q9NRM2 450 aaPredicted RBP19.4■□□□□ 0.7
SMARCD3-206ENST00000470588 ADAMTSL1Q8N6G6 1762 aa19.4■□□□□ 0.7
SMARCD3-206ENST00000470588 BECN2A8MW95 431 aa19.39■□□□□ 0.7
SMARCD3-206ENST00000470588 SMARCA1P28370 1054 aa19.39■□□□□ 0.7
SMARCD3-206ENST00000470588 SARM1Q6SZW1 724 aa19.39■□□□□ 0.7
SMARCD3-206ENST00000470588 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.39■□□□□ 0.7
SMARCD3-206ENST00000470588 ZDHHC15Q96MV8 337 aa19.39■□□□□ 0.7
SMARCD3-206ENST00000470588 HOOK1Q9UJC3 728 aaKnown RBP19.39■□□□□ 0.7
SMARCD3-206ENST00000470588 TUBE1Q9UJT0 475 aa19.39■□□□□ 0.7
SMARCD3-206ENST00000470588 SERPINA10Q9UK55 444 aa19.39■□□□□ 0.7
SMARCD3-206ENST00000470588 STX8Q9UNK0 236 aa19.39■□□□□ 0.7
SMARCD3-206ENST00000470588 ATP2B1P20020 1258 aa19.39■□□□□ 0.69
SMARCD3-206ENST00000470588 ZNF75DP51815 510 aa19.39■□□□□ 0.69
SMARCD3-206ENST00000470588 GABPAQ06546 454 aa19.39■□□□□ 0.69
SMARCD3-206ENST00000470588 GALNT17Q6IS24 598 aa19.39■□□□□ 0.69
SMARCD3-206ENST00000470588 KRBA2Q6ZNG9 492 aa19.39■□□□□ 0.69
SMARCD3-206ENST00000470588 PLA2G4DQ86XP0 818 aa19.39■□□□□ 0.69
SMARCD3-206ENST00000470588 TAOK3Q9H2K8 898 aa19.39■□□□□ 0.69
SMARCD3-206ENST00000470588 FER1L6Q2WGJ9 1857 aa19.39■□□□□ 0.69
SMARCD3-206ENST00000470588 LONRF3Q496Y0 759 aa19.38■□□□□ 0.69
SMARCD3-206ENST00000470588 EARS2Q5JPH6 523 aaKnown RBP19.38■□□□□ 0.69
SMARCD3-206ENST00000470588 DHX40Q8IX18 779 aaKnown RBP19.38■□□□□ 0.69
SMARCD3-206ENST00000470588 CNNM3Q8NE01 707 aa19.38■□□□□ 0.69
SMARCD3-206ENST00000470588 ERCC4Q92889 916 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms