RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 APBA2Q99767 749 aa37.63■■■■□ 3.61
HMG20B-209ENST00000470356 ARHGEF10LQ9HCE6 1279 aa37.63■■■■□ 3.61
HMG20B-209ENST00000470356 TMX2Q9Y320 296 aa37.63■■■■□ 3.61
HMG20B-209ENST00000470356 NR2E3Q9Y5X4 410 aa37.63■■■■□ 3.61
HMG20B-209ENST00000470356 RLFQ13129 1914 aa37.62■■■■□ 3.61
HMG20B-209ENST00000470356 ICA1Q05084 483 aa37.62■■■■□ 3.61
HMG20B-209ENST00000470356 MAP2K5Q13163 448 aa37.62■■■■□ 3.61
HMG20B-209ENST00000470356 TSHZ3Q63HK5 1081 aa37.62■■■■□ 3.61
HMG20B-209ENST00000470356 LPAR1Q92633 364 aa37.62■■■■□ 3.61
HMG20B-209ENST00000470356 TANGO6Q9C0B7 1094 aa37.62■■■■□ 3.61
HMG20B-209ENST00000470356 KIAA1755Q5JYT7 1200 aa37.61■■■■□ 3.61
HMG20B-209ENST00000470356 NECAB2Q7Z6G3 386 aa37.61■■■■□ 3.61
HMG20B-209ENST00000470356 SH2D4AQ9H788 454 aa37.61■■■■□ 3.61
HMG20B-209ENST00000470356 SLC15A5A6NIM6 579 aa37.6■■■■□ 3.61
HMG20B-209ENST00000470356 PTPREP23469 700 aa37.6■■■■□ 3.61
HMG20B-209ENST00000470356 CCL14Q16627 93 aa37.6■■■■□ 3.61
HMG20B-209ENST00000470356 WDR78Q5VTH9 848 aa37.6■■■■□ 3.61
HMG20B-209ENST00000470356 CLEC10AQ8IUN9 316 aa37.6■■■■□ 3.61
HMG20B-209ENST00000470356 ARPP21Q9UBL0 812 aaPredicted RBP37.6■■■■□ 3.61
HMG20B-209ENST00000470356 RNF113AO15541 343 aaKnown RBP37.59■■■■□ 3.61
HMG20B-209ENST00000470356 CACNB2Q08289 660 aaPredicted RBP37.59■■■■□ 3.61
HMG20B-209ENST00000470356 APPBP2Q92624 585 aa37.59■■■■□ 3.61
HMG20B-209ENST00000470356 ZFYP08048 801 aaPredicted RBP37.58■■■■□ 3.61
HMG20B-209ENST00000470356 SBK1Q52WX2 424 aa37.58■■■■□ 3.61
HMG20B-209ENST00000470356 GIMAP6Q6P9H5 292 aa37.58■■■■□ 3.61
HMG20B-209ENST00000470356 DIS3LQ8TF46 1054 aaKnown RBP37.58■■■■□ 3.61
HMG20B-209ENST00000470356 OSBP2Q969R2 916 aa37.58■■■■□ 3.61
HMG20B-209ENST00000470356 VCPKMTQ9H867 229 aa37.58■■■■□ 3.61
HMG20B-209ENST00000470356 PCDH10Q9P2E7 1040 aa37.58■■■■□ 3.61
HMG20B-209ENST00000470356 OGDHLQ9ULD0 1010 aa37.58■■■■□ 3.61
HMG20B-209ENST00000470356 IVNS1ABPQ9Y6Y0 642 aa37.58■■■■□ 3.61
HMG20B-209ENST00000470356 GSG1L2A8MUP6 293 aa37.57■■■■□ 3.6
HMG20B-209ENST00000470356 KANSL2Q9H9L4 492 aa37.57■■■■□ 3.6
HMG20B-209ENST00000470356 TTC41PQ6P2S7 1318 aa37.57■■■■□ 3.6
HMG20B-209ENST00000470356 EVI5O60447 810 aa37.56■■■■□ 3.6
HMG20B-209ENST00000470356 RRP1P56182 461 aaKnown RBP37.56■■■■□ 3.6
HMG20B-209ENST00000470356 HOXC6P09630 235 aa37.55■■■■□ 3.6
HMG20B-209ENST00000470356 MNX1P50219 401 aaPredicted RBP37.55■■■■□ 3.6
HMG20B-209ENST00000470356 GRB14Q14449 540 aa37.55■■■■□ 3.6
HMG20B-209ENST00000470356 CHRDL2Q6WN34 429 aa37.55■■■■□ 3.6
HMG20B-209ENST00000470356 SPICE1Q8N0Z3 855 aa37.55■■■■□ 3.6
HMG20B-209ENST00000470356 MB21D1Q8N884 522 aa37.55■■■■□ 3.6
HMG20B-209ENST00000470356 ALPK3Q96L96 1907 aa37.55■■■■□ 3.6
HMG20B-209ENST00000470356 EEF2P13639 858 aaKnown RBP37.54■■■■□ 3.6
HMG20B-209ENST00000470356 DSG3P32926 999 aa37.54■■■■□ 3.6
HMG20B-209ENST00000470356 MOV10L1Q9BXT6 1211 aaKnown RBP37.54■■■■□ 3.6
HMG20B-209ENST00000470356 NBPF3Q9H094 633 aa37.54■■■■□ 3.6
HMG20B-209ENST00000470356 A0A0G2JMZ2 1700 aa37.53■■■■□ 3.6
HMG20B-209ENST00000470356 FXR1P51114 621 aaKnown RBP eCLIP37.53■■■■□ 3.6
HMG20B-209ENST00000470356 SPATC1LQ9H0A9 340 aa37.53■■■■□ 3.6
HMG20B-209ENST00000470356 RANBP2P49792 3224 aaKnown RBP37.52■■■■□ 3.6
HMG20B-209ENST00000470356 ERC2O15083 957 aa37.52■■■■□ 3.6
HMG20B-209ENST00000470356 WDR46O15213 610 aaKnown RBP37.52■■■■□ 3.6
HMG20B-209ENST00000470356 FLOT1O75955 427 aa37.52■■■■□ 3.6
HMG20B-209ENST00000470356 CCND3P30281 292 aaPredicted RBP37.52■■■■□ 3.6
HMG20B-209ENST00000470356 LRRFIP1Q32MZ4 808 aaKnown RBP37.52■■■■□ 3.6
HMG20B-209ENST00000470356 SHCBP1Q8NEM2 672 aa37.52■■■■□ 3.6
HMG20B-209ENST00000470356 PARP14Q460N5 1801 aa37.52■■■■□ 3.6
HMG20B-209ENST00000470356 GPAA1O43292 621 aa37.51■■■■□ 3.6
HMG20B-209ENST00000470356 STRNO43815 780 aa37.51■■■■□ 3.6
HMG20B-209ENST00000470356 GNAT2P19087 354 aa37.51■■■■□ 3.6
HMG20B-209ENST00000470356 MFSD14CQ5VZR4 134 aa37.51■■■■□ 3.6
HMG20B-209ENST00000470356 PI4K2BQ8TCG2 481 aa37.51■■■■□ 3.6
HMG20B-209ENST00000470356 FLRT1Q9NZU1 646 aa37.51■■■■□ 3.6
HMG20B-209ENST00000470356 ATP2B2Q01814 1243 aa37.5■■■■□ 3.59
HMG20B-209ENST00000470356 LHX8Q68G74 356 aa37.5■■■■□ 3.59
HMG20B-209ENST00000470356 GNL3Q9BVP2 549 aaKnown RBP eCLIP37.5■■■■□ 3.59
HMG20B-209ENST00000470356 OTUD7AQ8TE49 926 aaPredicted RBP37.49■■■■□ 3.59
HMG20B-209ENST00000470356 GREB1LQ9C091 1923 aaPredicted RBP37.49■■■■□ 3.59
HMG20B-209ENST00000470356 ROBO3Q96MS0 1386 aa37.48■■■■□ 3.59
HMG20B-209ENST00000470356 MINDY4BA8MYZ0 360 aa37.48■■■■□ 3.59
HMG20B-209ENST00000470356 RASA1P20936 1047 aa37.48■■■■□ 3.59
HMG20B-209ENST00000470356 NPLOC4Q8TAT6 608 aa37.48■■■■□ 3.59
HMG20B-209ENST00000470356 ATG4CQ96DT6 458 aa37.48■■■■□ 3.59
HMG20B-209ENST00000470356 C11orf49Q9H6J7 331 aa37.48■■■■□ 3.59
HMG20B-209ENST00000470356 GOPCQ9HD26 462 aa37.48■■■■□ 3.59
HMG20B-209ENST00000470356 RBM27Q9P2N5 1060 aaKnown RBP37.48■■■■□ 3.59
HMG20B-209ENST00000470356 M0R2C6 588 aa37.47■■■■□ 3.59
HMG20B-209ENST00000470356 ERCC3P19447 782 aa37.47■■■■□ 3.59
HMG20B-209ENST00000470356 PRO3102Q9H379 93 aa37.47■■■■□ 3.59
HMG20B-209ENST00000470356 MROH8Q9H579 483 aa37.47■■■■□ 3.59
HMG20B-209ENST00000470356 MKNK2Q9HBH9 465 aa37.47■■■■□ 3.59
HMG20B-209ENST00000470356 EPB41L4AQ9HCS5 686 aaPredicted RBP37.47■■■■□ 3.59
HMG20B-209ENST00000470356 ZNF236Q9UL36 1845 aa37.47■■■■□ 3.59
HMG20B-209ENST00000470356 DPP9Q86TI2 863 aa37.46■■■■□ 3.59
HMG20B-209ENST00000470356 ADAMTS5Q9UNA0 930 aa37.46■■■■□ 3.59
HMG20B-209ENST00000470356 IGHA2P01877 340 aa37.45■■■■□ 3.59
HMG20B-209ENST00000470356 ADORA2AP29274 412 aa37.45■■■■□ 3.59
HMG20B-209ENST00000470356 PLS1Q14651 629 aa37.45■■■■□ 3.59
HMG20B-209ENST00000470356 ZNFX1Q9P2E3 1918 aaKnown RBP37.44■■■■□ 3.58
HMG20B-209ENST00000470356 PATL2C9JE40 543 aaKnown RBP37.44■■■■□ 3.58
HMG20B-209ENST00000470356 APPP05067 770 aa37.44■■■■□ 3.58
HMG20B-209ENST00000470356 MX1P20591 662 aa37.44■■■■□ 3.58
HMG20B-209ENST00000470356 TDO2P48775 406 aa37.44■■■■□ 3.58
HMG20B-209ENST00000470356 CRBNQ96SW2 442 aa37.44■■■■□ 3.58
HMG20B-209ENST00000470356 COL11A1P12107 1806 aaPredicted RBP37.43■■■■□ 3.58
HMG20B-209ENST00000470356 STK11IPQ8N1F8 1099 aa37.43■■■■□ 3.58
HMG20B-209ENST00000470356 SAMD1Q6SPF0 538 aaPredicted RBP37.42■■■■□ 3.58
HMG20B-209ENST00000470356 NCAPG2Q86XI2 1143 aa37.42■■■■□ 3.58
HMG20B-209ENST00000470356 IFNL3Q8IZI9 196 aa37.42■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms