RNA–Protein interactions for RNA: ENST00000469867.1

FAM228B-203, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 1 (best)

Gene FAM228B, Length 2,495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-203ENST00000469867 USP14P54578 494 aa13.89□□□□□ -0.19
FAM228B-203ENST00000469867 GPR142Q7Z601 462 aa13.89□□□□□ -0.19
FAM228B-203ENST00000469867 PAWRQ96IZ0 340 aaKnown RBP13.89□□□□□ -0.19
FAM228B-203ENST00000469867 HTATIP2Q9BUP3 242 aa13.89□□□□□ -0.19
FAM228B-203ENST00000469867 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.89□□□□□ -0.19
FAM228B-203ENST00000469867 USP17L15C9J2P7 530 aa13.89□□□□□ -0.19
FAM228B-203ENST00000469867 USP17L13C9JLJ4 530 aa13.89□□□□□ -0.19
FAM228B-203ENST00000469867 USP17L11C9JVI0 530 aa13.89□□□□□ -0.19
FAM228B-203ENST00000469867 USP17L18D6R9N7 530 aa13.89□□□□□ -0.19
FAM228B-203ENST00000469867 USP17L22D6RA61 530 aa13.89□□□□□ -0.19
FAM228B-203ENST00000469867 USP17L17D6RBQ6 530 aa13.89□□□□□ -0.19
FAM228B-203ENST00000469867 USP17L19D6RCP7 530 aa13.89□□□□□ -0.19
FAM228B-203ENST00000469867 USP17L20D6RJB6 530 aa13.89□□□□□ -0.19
FAM228B-203ENST00000469867 MAPK4P31152 587 aa13.89□□□□□ -0.19
FAM228B-203ENST00000469867 USP17L24Q0WX57 530 aa13.89□□□□□ -0.19
FAM228B-203ENST00000469867 CHRDL2Q6WN34 429 aa13.89□□□□□ -0.19
FAM228B-203ENST00000469867 DIS3LQ8TF46 1054 aaKnown RBP13.89□□□□□ -0.19
FAM228B-203ENST00000469867 C12orf42Q96LP6 360 aa13.89□□□□□ -0.19
FAM228B-203ENST00000469867 RPAP3Q9H6T3 665 aaPredicted RBP13.89□□□□□ -0.19
FAM228B-203ENST00000469867 PLXNB2O15031 1838 aa13.89□□□□□ -0.19
FAM228B-203ENST00000469867 PRKAR2AP13861 404 aaKnown RBP13.88□□□□□ -0.19
FAM228B-203ENST00000469867 CATSPERGQ6ZRH7 1159 aa13.88□□□□□ -0.19
FAM228B-203ENST00000469867 HMX1Q9NP08 348 aaPredicted RBP13.88□□□□□ -0.19
FAM228B-203ENST00000469867 RPTORQ8N122 1335 aa13.88□□□□□ -0.19
FAM228B-203ENST00000469867 CCL14Q16627 93 aa13.88□□□□□ -0.19
FAM228B-203ENST00000469867 SOCS4Q8WXH5 440 aa13.88□□□□□ -0.19
FAM228B-203ENST00000469867 PUS7LQ9H0K6 701 aaKnown RBP13.88□□□□□ -0.19
FAM228B-203ENST00000469867 CWC22Q9HCG8 908 aaKnown RBP13.88□□□□□ -0.19
FAM228B-203ENST00000469867 RABGAP1Q9Y3P9 1069 aa13.88□□□□□ -0.19
FAM228B-203ENST00000469867 USP17L12C9JPN9 530 aa13.87□□□□□ -0.19
FAM228B-203ENST00000469867 USP17L21D6R901 530 aa13.87□□□□□ -0.19
FAM228B-203ENST00000469867 CRISPLD2Q9H0B8 497 aa13.87□□□□□ -0.19
FAM228B-203ENST00000469867 FXR1P51114 621 aaKnown RBP eCLIP13.87□□□□□ -0.19
FAM228B-203ENST00000469867 MFAP1P55081 439 aaKnown RBP13.87□□□□□ -0.19
FAM228B-203ENST00000469867 SPICE1Q8N0Z3 855 aa13.87□□□□□ -0.19
FAM228B-203ENST00000469867 TANGO6Q9C0B7 1094 aa13.87□□□□□ -0.19
FAM228B-203ENST00000469867 ATP8A2Q9NTI2 1148 aa13.87□□□□□ -0.19
FAM228B-203ENST00000469867 BTBD7Q9P203 1132 aa13.87□□□□□ -0.19
FAM228B-203ENST00000469867 SPDYE16A6NNV3 312 aaPredicted RBP13.86□□□□□ -0.19
FAM228B-203ENST00000469867 CNMDO75829 334 aa13.86□□□□□ -0.19
FAM228B-203ENST00000469867 XRCC5P13010 732 aaKnown RBP13.86□□□□□ -0.19
FAM228B-203ENST00000469867 AKR1B1P15121 316 aa13.86□□□□□ -0.19
FAM228B-203ENST00000469867 UBE3CQ15386 1083 aa13.86□□□□□ -0.19
FAM228B-203ENST00000469867 BMP2KLQ5H9B9 411 aa13.86□□□□□ -0.19
FAM228B-203ENST00000469867 SAMD1Q6SPF0 538 aaPredicted RBP13.86□□□□□ -0.19
FAM228B-203ENST00000469867 PLEKHH3Q7Z736 793 aa13.86□□□□□ -0.19
FAM228B-203ENST00000469867 GTF3C2Q8WUA4 911 aaPredicted RBP13.86□□□□□ -0.19
FAM228B-203ENST00000469867 ECHDC1Q9NTX5 307 aa13.86□□□□□ -0.19
FAM228B-203ENST00000469867 SLC4A4Q9Y6R1 1079 aa13.86□□□□□ -0.19
FAM228B-203ENST00000469867 EVI5O60447 810 aa13.86□□□□□ -0.19
FAM228B-203ENST00000469867 KIAA1755Q5JYT7 1200 aa13.86□□□□□ -0.19
FAM228B-203ENST00000469867 TMEM179Q6ZVK1 233 aa13.86□□□□□ -0.19
FAM228B-203ENST00000469867 RBM27Q9P2N5 1060 aaKnown RBP13.86□□□□□ -0.19
FAM228B-203ENST00000469867 ZKSCAN1P17029 563 aaPredicted RBP13.85□□□□□ -0.19
FAM228B-203ENST00000469867 CCNA1P78396 465 aa13.85□□□□□ -0.19
FAM228B-203ENST00000469867 CACNB2Q08289 660 aaPredicted RBP13.85□□□□□ -0.19
FAM228B-203ENST00000469867 MORN1Q5T089 497 aa13.85□□□□□ -0.19
FAM228B-203ENST00000469867 MAP3K21Q5TCX8 1036 aa13.85□□□□□ -0.19
FAM228B-203ENST00000469867 C12orf60Q5U649 245 aa13.85□□□□□ -0.19
FAM228B-203ENST00000469867 USP6NLQ92738 828 aa13.85□□□□□ -0.19
FAM228B-203ENST00000469867 NR2E3Q9Y5X4 410 aa13.85□□□□□ -0.19
FAM228B-203ENST00000469867 RGS2P41220 211 aa13.85□□□□□ -0.19
FAM228B-203ENST00000469867 ICA1Q05084 483 aa13.85□□□□□ -0.19
FAM228B-203ENST00000469867 SIAH1Q8IUQ4 282 aa13.85□□□□□ -0.19
FAM228B-203ENST00000469867 STK11IPQ8N1F8 1099 aa13.85□□□□□ -0.19
FAM228B-203ENST00000469867 SWAP70Q9UH65 585 aa13.85□□□□□ -0.19
FAM228B-203ENST00000469867 MYH8P13535 1937 aa13.85□□□□□ -0.19
FAM228B-203ENST00000469867 MYH7P12883 1935 aa13.84□□□□□ -0.19
FAM228B-203ENST00000469867 CDK8P49336 464 aa13.84□□□□□ -0.19
FAM228B-203ENST00000469867 ATP2B2Q01814 1243 aa13.84□□□□□ -0.19
FAM228B-203ENST00000469867 NECAB2Q7Z6G3 386 aa13.84□□□□□ -0.19
FAM228B-203ENST00000469867 AMOTL1Q8IY63 956 aa13.84□□□□□ -0.19
FAM228B-203ENST00000469867 APBA2Q99767 749 aa13.84□□□□□ -0.19
FAM228B-203ENST00000469867 IVNS1ABPQ9Y6Y0 642 aa13.84□□□□□ -0.19
FAM228B-203ENST00000469867 CDH23Q9H251 3354 aa13.84□□□□□ -0.19
FAM228B-203ENST00000469867 CCND3P30281 292 aaPredicted RBP13.84□□□□□ -0.19
FAM228B-203ENST00000469867 COG2Q14746 738 aa13.84□□□□□ -0.19
FAM228B-203ENST00000469867 TTC22Q5TAA0 569 aa13.84□□□□□ -0.19
FAM228B-203ENST00000469867 CTR9Q6PD62 1173 aa13.84□□□□□ -0.19
FAM228B-203ENST00000469867 PCDH10Q9P2E7 1040 aa13.84□□□□□ -0.19
FAM228B-203ENST00000469867 EYSQ5T1H1 3165 aa13.83□□□□□ -0.19
FAM228B-203ENST00000469867 RAD21O60216 631 aa13.83□□□□□ -0.2
FAM228B-203ENST00000469867 PDE1AP54750 535 aa13.83□□□□□ -0.2
FAM228B-203ENST00000469867 MAP2K5Q13163 448 aa13.83□□□□□ -0.2
FAM228B-203ENST00000469867 ZSCAN25Q6NSZ9 544 aa13.83□□□□□ -0.2
FAM228B-203ENST00000469867 LBX2Q6XYB7 198 aa13.83□□□□□ -0.2
FAM228B-203ENST00000469867 FLRT1Q9NZU1 646 aa13.83□□□□□ -0.2
FAM228B-203ENST00000469867 SALL3Q9BXA9 1300 aa13.83□□□□□ -0.2
FAM228B-203ENST00000469867 FLOT1O75955 427 aa13.83□□□□□ -0.2
FAM228B-203ENST00000469867 MNX1P50219 401 aaPredicted RBP13.83□□□□□ -0.2
FAM228B-203ENST00000469867 PLS1Q14651 629 aa13.83□□□□□ -0.2
FAM228B-203ENST00000469867 NBPF3Q9H094 633 aa13.83□□□□□ -0.2
FAM228B-203ENST00000469867 HOXC10Q9NYD6 342 aa13.83□□□□□ -0.2
FAM228B-203ENST00000469867 GLRX3O76003 335 aaKnown RBP13.82□□□□□ -0.2
FAM228B-203ENST00000469867 SDSP20132 328 aa13.82□□□□□ -0.2
FAM228B-203ENST00000469867 C16orf86Q6ZW13 317 aa13.82□□□□□ -0.2
FAM228B-203ENST00000469867 KBTBD3Q8NAB2 608 aa13.82□□□□□ -0.2
FAM228B-203ENST00000469867 OSBP2Q969R2 916 aa13.82□□□□□ -0.2
FAM228B-203ENST00000469867 STRBPQ96SI9 672 aaKnown RBP13.82□□□□□ -0.2
FAM228B-203ENST00000469867 ARHGEF10LQ9HCE6 1279 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms