RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 ZNF526Q8TF50 670 aaPredicted RBP12.14□□□□□ -0.47
THBS3-206ENST00000469769 SLKQ9H2G2 1235 aaPredicted RBP12.14□□□□□ -0.47
THBS3-206ENST00000469769 KAT14Q9H8E8 782 aa12.14□□□□□ -0.47
THBS3-206ENST00000469769 GPBP1L1Q9HC44 474 aaPredicted RBP12.14□□□□□ -0.47
THBS3-206ENST00000469769 CLIP2Q9UDT6 1046 aa12.14□□□□□ -0.47
THBS3-206ENST00000469769 SNCAIPQ9Y6H5 919 aa12.14□□□□□ -0.47
THBS3-206ENST00000469769 PASKQ96RG2 1323 aa12.13□□□□□ -0.47
THBS3-206ENST00000469769 CCDC196A0A1B0GTZ2 297 aa12.13□□□□□ -0.47
THBS3-206ENST00000469769 GOLGA8BA8MQT2 603 aa12.13□□□□□ -0.47
THBS3-206ENST00000469769 USP17L5A8MUK1 530 aa12.13□□□□□ -0.47
THBS3-206ENST00000469769 TRAF5O00463 557 aa12.13□□□□□ -0.47
THBS3-206ENST00000469769 PDHBP11177 359 aa12.13□□□□□ -0.47
THBS3-206ENST00000469769 CDC27P30260 824 aa12.13□□□□□ -0.47
THBS3-206ENST00000469769 DDIT3P35638 169 aa12.13□□□□□ -0.47
THBS3-206ENST00000469769 METAP2P50579 478 aaKnown RBP eCLIP12.13□□□□□ -0.47
THBS3-206ENST00000469769 VGLL4Q14135 290 aa12.13□□□□□ -0.47
THBS3-206ENST00000469769 GRM4Q14833 912 aa12.13□□□□□ -0.47
THBS3-206ENST00000469769 RAB3GAP1Q15042 981 aa12.13□□□□□ -0.47
THBS3-206ENST00000469769 ANKRD13AQ8IZ07 590 aa12.13□□□□□ -0.47
THBS3-206ENST00000469769 DNAJC5GQ8N7S2 189 aa12.13□□□□□ -0.47
THBS3-206ENST00000469769 NECAB1Q8N987 351 aa12.13□□□□□ -0.47
THBS3-206ENST00000469769 ZKSCAN4Q969J2 545 aaPredicted RBP12.13□□□□□ -0.47
THBS3-206ENST00000469769 GMCL1Q96IK5 515 aa12.13□□□□□ -0.47
THBS3-206ENST00000469769 KIAA1683Q9H0B3 1180 aa12.13□□□□□ -0.47
THBS3-206ENST00000469769 ARHGEF10LQ9HCE6 1279 aa12.13□□□□□ -0.47
THBS3-206ENST00000469769 RBM28Q9NW13 759 aaKnown RBP12.13□□□□□ -0.47
THBS3-206ENST00000469769 PTPRFP10586 1907 aa12.13□□□□□ -0.47
THBS3-206ENST00000469769 F5H6K3 240 aa12.12□□□□□ -0.47
THBS3-206ENST00000469769 DHX16O60231 1041 aaKnown RBP12.12□□□□□ -0.47
THBS3-206ENST00000469769 IFNAR1P17181 557 aa12.12□□□□□ -0.47
THBS3-206ENST00000469769 ADD1P35611 737 aaKnown RBP12.12□□□□□ -0.47
THBS3-206ENST00000469769 KLRC3Q07444 240 aa12.12□□□□□ -0.47
THBS3-206ENST00000469769 RTN1Q16799 776 aa12.12□□□□□ -0.47
THBS3-206ENST00000469769 CST9Q5W186 159 aa12.12□□□□□ -0.47
THBS3-206ENST00000469769 NOL8Q76FK4 1167 aaKnown RBP12.12□□□□□ -0.47
THBS3-206ENST00000469769 ARMC9Q7Z3E5 817 aa12.12□□□□□ -0.47
THBS3-206ENST00000469769 MICU3Q86XE3 530 aa12.12□□□□□ -0.47
THBS3-206ENST00000469769 CCDC83Q8IWF9 413 aa12.12□□□□□ -0.47
THBS3-206ENST00000469769 NSUN7Q8NE18 718 aaKnown RBP12.12□□□□□ -0.47
THBS3-206ENST00000469769 RBM46Q8TBY0 533 aaKnown RBP12.12□□□□□ -0.47
THBS3-206ENST00000469769 ACER1Q8TDN7 264 aa12.12□□□□□ -0.47
THBS3-206ENST00000469769 C12orf42Q96LP6 360 aa12.12□□□□□ -0.47
THBS3-206ENST00000469769 MYL10Q9BUA6 226 aa12.12□□□□□ -0.47
THBS3-206ENST00000469769 VCPKMTQ9H867 229 aa12.12□□□□□ -0.47
THBS3-206ENST00000469769 MAD2L2Q9UI95 211 aa12.12□□□□□ -0.47
THBS3-206ENST00000469769 FZD1Q9UP38 647 aa12.12□□□□□ -0.47
THBS3-206ENST00000469769 AFG3L2Q9Y4W6 797 aa12.12□□□□□ -0.47
THBS3-206ENST00000469769 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.12□□□□□ -0.47
THBS3-206ENST00000469769 PCNTO95613 3336 aa12.11□□□□□ -0.47
THBS3-206ENST00000469769 SPDYE5A6NIY4 337 aa12.11□□□□□ -0.47
THBS3-206ENST00000469769 GOLGA8AA7E2F4 631 aa12.11□□□□□ -0.47
THBS3-206ENST00000469769 PLA2G6O60733 806 aa12.11□□□□□ -0.47
THBS3-206ENST00000469769 TOMM70O94826 608 aa12.11□□□□□ -0.47
THBS3-206ENST00000469769 RXRAP19793 462 aa12.11□□□□□ -0.47
THBS3-206ENST00000469769 KIF5BP33176 963 aa12.11□□□□□ -0.47
THBS3-206ENST00000469769 ECE1P42892 770 aa12.11□□□□□ -0.47
THBS3-206ENST00000469769 GNAQP50148 359 aa12.11□□□□□ -0.47
THBS3-206ENST00000469769 CCT2P78371 535 aaKnown RBP12.11□□□□□ -0.47
THBS3-206ENST00000469769 PPATQ06203 517 aa12.11□□□□□ -0.47
THBS3-206ENST00000469769 FMR1Q06787 632 aaKnown RBP eCLIP12.11□□□□□ -0.47
THBS3-206ENST00000469769 ZNF543Q08ER8 600 aa12.11□□□□□ -0.47
THBS3-206ENST00000469769 ASPRV1Q53RT3 343 aa12.11□□□□□ -0.47
THBS3-206ENST00000469769 SH3D19Q5HYK7 790 aa12.11□□□□□ -0.47
THBS3-206ENST00000469769 GPATCH4Q5T3I0 446 aaKnown RBP12.11□□□□□ -0.47
THBS3-206ENST00000469769 TMTC3Q6ZXV5 915 aa12.11□□□□□ -0.47
THBS3-206ENST00000469769 NBPF11Q86T75 865 aa12.11□□□□□ -0.47
THBS3-206ENST00000469769 LRRC47Q8N1G4 583 aaKnown RBP12.11□□□□□ -0.47
THBS3-206ENST00000469769 ZNF280CQ8ND82 737 aa12.11□□□□□ -0.47
THBS3-206ENST00000469769 RGS22Q8NE09 1264 aa12.11□□□□□ -0.47
THBS3-206ENST00000469769 DCAF4Q8WV16 495 aa12.11□□□□□ -0.47
THBS3-206ENST00000469769 LZTS2Q9BRK4 669 aa12.11□□□□□ -0.47
THBS3-206ENST00000469769 SH2D4AQ9H788 454 aa12.11□□□□□ -0.47
THBS3-206ENST00000469769 AS3MTQ9HBK9 375 aa12.11□□□□□ -0.47
THBS3-206ENST00000469769 NCOA5Q9HCD5 579 aaKnown RBP12.11□□□□□ -0.47
THBS3-206ENST00000469769 GBA2Q9HCG7 927 aaPredicted RBP12.11□□□□□ -0.47
THBS3-206ENST00000469769 CWC22Q9HCG8 908 aaKnown RBP12.11□□□□□ -0.47
THBS3-206ENST00000469769 PICK1Q9NRD5 415 aa12.11□□□□□ -0.47
THBS3-206ENST00000469769 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.11□□□□□ -0.47
THBS3-206ENST00000469769 BAZ2BQ9UIF8 2168 aaKnown RBP12.11□□□□□ -0.47
THBS3-206ENST00000469769 C19orf81C9J6K1 198 aa12.1□□□□□ -0.47
THBS3-206ENST00000469769 USP17L10C9JJH3 530 aa12.1□□□□□ -0.47
THBS3-206ENST00000469769 NDUFB10O96000 172 aa12.1□□□□□ -0.47
THBS3-206ENST00000469769 SLC4A3P48751 1232 aa12.1□□□□□ -0.47
THBS3-206ENST00000469769 BACE1P56817 501 aa12.1□□□□□ -0.47
THBS3-206ENST00000469769 HMGN5P82970 282 aaKnown RBP12.1□□□□□ -0.47
THBS3-206ENST00000469769 STK3Q13188 491 aa12.1□□□□□ -0.47
THBS3-206ENST00000469769 SLC35G1Q2M3R5 365 aa12.1□□□□□ -0.47
THBS3-206ENST00000469769 KIAA1755Q5JYT7 1200 aa12.1□□□□□ -0.47
THBS3-206ENST00000469769 SLFN13Q68D06 897 aa12.1□□□□□ -0.47
THBS3-206ENST00000469769 BTNL9Q6UXG8 535 aa12.1□□□□□ -0.47
THBS3-206ENST00000469769 MOB2Q70IA6 237 aa12.1□□□□□ -0.47
THBS3-206ENST00000469769 ERO1BQ86YB8 467 aa12.1□□□□□ -0.47
THBS3-206ENST00000469769 STAG2Q8N3U4 1231 aa12.1□□□□□ -0.47
THBS3-206ENST00000469769 CTCFLQ8NI51 663 aaPredicted RBP12.1□□□□□ -0.47
THBS3-206ENST00000469769 NUP133Q8WUM0 1156 aa12.1□□□□□ -0.47
THBS3-206ENST00000469769 LPAR1Q92633 364 aa12.1□□□□□ -0.47
THBS3-206ENST00000469769 SPZ1Q9BXG8 430 aa12.1□□□□□ -0.47
THBS3-206ENST00000469769 RIOX1Q9H6W3 641 aa12.1□□□□□ -0.47
THBS3-206ENST00000469769 KCNH4Q9UQ05 1017 aa12.1□□□□□ -0.47
THBS3-206ENST00000469769 CSADQ9Y600 493 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms