RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 CALCOCO1Q9P1Z2 691 aa13.7□□□□□ -0.22
VARS2-205ENST00000469358 VPS18Q9P253 973 aa13.7□□□□□ -0.22
VARS2-205ENST00000469358 HDAC6Q9UBN7 1215 aa13.7□□□□□ -0.22
VARS2-205ENST00000469358 MYO1BO43795 1136 aa13.7□□□□□ -0.22
VARS2-205ENST00000469358 TPM1P09493 284 aa13.7□□□□□ -0.22
VARS2-205ENST00000469358 VSNL1P62760 191 aa13.7□□□□□ -0.22
VARS2-205ENST00000469358 CDKAL1Q5VV42 579 aa13.7□□□□□ -0.22
VARS2-205ENST00000469358 RGS22Q8NE09 1264 aa13.7□□□□□ -0.22
VARS2-205ENST00000469358 BBXQ8WY36 941 aaPredicted RBP13.7□□□□□ -0.22
VARS2-205ENST00000469358 NUP88Q99567 741 aaPredicted RBP13.7□□□□□ -0.22
VARS2-205ENST00000469358 LCMT1Q9UIC8 334 aa13.7□□□□□ -0.22
VARS2-205ENST00000469358 ADAM21Q9UKJ8 722 aa13.7□□□□□ -0.22
VARS2-205ENST00000469358 ZNF142P52746 1687 aaPredicted RBP13.7□□□□□ -0.22
VARS2-205ENST00000469358 SMIM5Q71RC9 77 aa13.7□□□□□ -0.22
VARS2-205ENST00000469358 TRIML1Q8N9V2 468 aa13.7□□□□□ -0.22
VARS2-205ENST00000469358 RASGRP4Q8TDF6 673 aa13.7□□□□□ -0.22
VARS2-205ENST00000469358 PHF20Q9BVI0 1012 aa13.7□□□□□ -0.22
VARS2-205ENST00000469358 AATFQ9NY61 560 aaKnown RBP eCLIP13.7□□□□□ -0.22
VARS2-205ENST00000469358 CDC23Q9UJX2 597 aa13.7□□□□□ -0.22
VARS2-205ENST00000469358 CEP131Q9UPN4 1083 aa13.7□□□□□ -0.22
VARS2-205ENST00000469358 MROH5Q6ZUA9 1318 aa13.69□□□□□ -0.22
VARS2-205ENST00000469358 CCDC196A0A1B0GTZ2 297 aa13.69□□□□□ -0.22
VARS2-205ENST00000469358 RAD51AP2Q09MP3 1159 aa13.69□□□□□ -0.22
VARS2-205ENST00000469358 FUT2Q10981 343 aa13.69□□□□□ -0.22
VARS2-205ENST00000469358 NPY5RQ15761 445 aa13.69□□□□□ -0.22
VARS2-205ENST00000469358 SLIT2O94813 1529 aa13.69□□□□□ -0.22
VARS2-205ENST00000469358 PP2D1A8MPX8 630 aa13.69□□□□□ -0.22
VARS2-205ENST00000469358 TTC38Q5R3I4 469 aa13.69□□□□□ -0.22
VARS2-205ENST00000469358 IFIT1BQ5T764 474 aaKnown RBP13.69□□□□□ -0.22
VARS2-205ENST00000469358 SH3RF1Q7Z6J0 888 aa13.69□□□□□ -0.22
VARS2-205ENST00000469358 SRGAP2O75044 1071 aa13.68□□□□□ -0.22
VARS2-205ENST00000469358 CHRNDQ07001 517 aa13.68□□□□□ -0.22
VARS2-205ENST00000469358 BEND6Q5SZJ8 279 aaPredicted RBP13.68□□□□□ -0.22
VARS2-205ENST00000469358 KANK3Q6NY19 840 aa13.68□□□□□ -0.22
VARS2-205ENST00000469358 ZSCAN10Q96SZ4 725 aaPredicted RBP13.68□□□□□ -0.22
VARS2-205ENST00000469358 BTG4Q9NY30 223 aa13.68□□□□□ -0.22
VARS2-205ENST00000469358 GUCA1BQ9UMX6 200 aa13.68□□□□□ -0.22
VARS2-205ENST00000469358 ZMYND10O75800 440 aa13.68□□□□□ -0.22
VARS2-205ENST00000469358 SRBD1Q8N5C6 995 aaKnown RBP13.68□□□□□ -0.22
VARS2-205ENST00000469358 ESR2Q92731 530 aa13.68□□□□□ -0.22
VARS2-205ENST00000469358 LRP6O75581 1613 aa13.68□□□□□ -0.22
VARS2-205ENST00000469358 TOGARAM1Q9Y4F4 1720 aa13.68□□□□□ -0.22
VARS2-205ENST00000469358 MAGEB6P1A0A0J9YX57 407 aa13.68□□□□□ -0.22
VARS2-205ENST00000469358 ARHGAP25P42331 645 aa13.68□□□□□ -0.22
VARS2-205ENST00000469358 SKIDA1Q1XH10 827 aa13.68□□□□□ -0.22
VARS2-205ENST00000469358 JAKMIP3Q5VZ66 844 aa13.68□□□□□ -0.22
VARS2-205ENST00000469358 FOXR1Q6PIV2 292 aa13.68□□□□□ -0.22
VARS2-205ENST00000469358 RASGRP2Q7LDG7 609 aa13.68□□□□□ -0.22
VARS2-205ENST00000469358 CTAGE9A4FU28 777 aa13.67□□□□□ -0.22
VARS2-205ENST00000469358 CYP2D6P10635 497 aa13.67□□□□□ -0.22
VARS2-205ENST00000469358 GTF2E1P29083 439 aaPredicted RBP13.67□□□□□ -0.22
VARS2-205ENST00000469358 KRT9P35527 623 aa13.67□□□□□ -0.22
VARS2-205ENST00000469358 ELOA2Q8IYF1 753 aaPredicted RBP13.67□□□□□ -0.22
VARS2-205ENST00000469358 ZNF34Q8IZ26 560 aa13.67□□□□□ -0.22
VARS2-205ENST00000469358 RNF26Q9BY78 433 aaPredicted RBP13.67□□□□□ -0.22
VARS2-205ENST00000469358 ABHD10Q9NUJ1 306 aa13.67□□□□□ -0.22
VARS2-205ENST00000469358 CCDC151A5D8V7 595 aa13.67□□□□□ -0.22
VARS2-205ENST00000469358 TRIM66O15016 1216 aa13.67□□□□□ -0.22
VARS2-205ENST00000469358 PMS1P54277 932 aaKnown RBP13.67□□□□□ -0.22
VARS2-205ENST00000469358 ZSCAN26Q16670 478 aa13.67□□□□□ -0.22
VARS2-205ENST00000469358 FILIP1LQ4L180 1135 aa13.67□□□□□ -0.22
VARS2-205ENST00000469358 C3orf67Q6ZVT6 689 aa13.67□□□□□ -0.22
VARS2-205ENST00000469358 ZNF384Q8TF68 577 aa13.67□□□□□ -0.22
VARS2-205ENST00000469358 NELFBQ8WX92 580 aa13.67□□□□□ -0.22
VARS2-205ENST00000469358 GPKOWQ92917 476 aaPredicted RBP eCLIP13.67□□□□□ -0.227e-6■■■■■ 33.4
VARS2-205ENST00000469358 PLEKHA4Q9H4M7 779 aa13.67□□□□□ -0.22
VARS2-205ENST00000469358 FAN1Q9Y2M0 1017 aa13.67□□□□□ -0.22
VARS2-205ENST00000469358 USP17L12C9JPN9 530 aa13.67□□□□□ -0.22
VARS2-205ENST00000469358 USP17L21D6R901 530 aa13.67□□□□□ -0.22
VARS2-205ENST00000469358 TROAPQ12815 778 aa13.67□□□□□ -0.22
VARS2-205ENST00000469358 REXO2Q9Y3B8 237 aaKnown RBP13.67□□□□□ -0.22
VARS2-205ENST00000469358 PARP4Q9UKK3 1724 aaKnown RBP13.66□□□□□ -0.22
VARS2-205ENST00000469358 ANKRD65E5RJM6 399 aa13.66□□□□□ -0.22
VARS2-205ENST00000469358 KLRK1P26718 216 aa13.66□□□□□ -0.22
VARS2-205ENST00000469358 COPB1P53618 953 aaKnown RBP13.66□□□□□ -0.22
VARS2-205ENST00000469358 CATIPQ7Z7H3 387 aa13.66□□□□□ -0.22
VARS2-205ENST00000469358 ACSBG1Q96GR2 724 aa13.66□□□□□ -0.22
VARS2-205ENST00000469358 CAPZA3Q96KX2 299 aa13.66□□□□□ -0.22
VARS2-205ENST00000469358 STRCP1A6NGW2 1772 aa13.66□□□□□ -0.22
VARS2-205ENST00000469358 PNPLA7Q6ZV29 1317 aa13.66□□□□□ -0.22
VARS2-205ENST00000469358 KCNJ18B7U540 433 aa13.66□□□□□ -0.22
VARS2-205ENST00000469358 MAP2K7O14733 419 aa13.66□□□□□ -0.22
VARS2-205ENST00000469358 UBXN1Q04323 297 aa13.66□□□□□ -0.22
VARS2-205ENST00000469358 KCNJ12Q14500 433 aa13.66□□□□□ -0.22
VARS2-205ENST00000469358 GSDMAQ96QA5 445 aa13.66□□□□□ -0.22
VARS2-205ENST00000469358 RNF41Q9H4P4 317 aaPredicted RBP13.66□□□□□ -0.22
VARS2-205ENST00000469358 COL4A1P02462 1669 aa13.66□□□□□ -0.22
VARS2-205ENST00000469358 NKRFO15226 690 aaKnown RBP eCLIP13.65□□□□□ -0.22
VARS2-205ENST00000469358 PRCPP42785 496 aa13.65□□□□□ -0.22
VARS2-205ENST00000469358 NLRP5P59047 1200 aa13.65□□□□□ -0.22
VARS2-205ENST00000469358 E2F4Q16254 413 aa13.65□□□□□ -0.22
VARS2-205ENST00000469358 TMTC2Q8N394 836 aa13.65□□□□□ -0.22
VARS2-205ENST00000469358 TNFRSF25Q93038 417 aa13.65□□□□□ -0.22
VARS2-205ENST00000469358 XBP1P17861 261 aa13.65□□□□□ -0.22
VARS2-205ENST00000469358 KLK7P49862 253 aa13.65□□□□□ -0.22
VARS2-205ENST00000469358 MRPS25P82663 173 aaKnown RBP13.65□□□□□ -0.22
VARS2-205ENST00000469358 GSPT2Q8IYD1 628 aaKnown RBP13.65□□□□□ -0.22
VARS2-205ENST00000469358 CCDC24Q8N4L8 307 aa13.65□□□□□ -0.22
VARS2-205ENST00000469358 CCDC102AQ96A19 550 aa13.65□□□□□ -0.22
VARS2-205ENST00000469358 GNAT2P19087 354 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms