RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 USP17L24Q0WX57 530 aa15.66■□□□□ 0.1
HDAC6-217ENST00000469223 ZNF365Q70YC5 407 aa15.66■□□□□ 0.1
HDAC6-217ENST00000469223 ANKRD33Q7Z3H0 272 aa15.66■□□□□ 0.1
HDAC6-217ENST00000469223 TEX11Q8IYF3 940 aa15.66■□□□□ 0.1
HDAC6-217ENST00000469223 HERVK_113Q902F9 699 aa15.66■□□□□ 0.1
HDAC6-217ENST00000469223 RARBP10826 455 aa15.65■□□□□ 0.1
HDAC6-217ENST00000469223 RFX5P48382 616 aaPredicted RBP15.65■□□□□ 0.1
HDAC6-217ENST00000469223 PPP2R2DQ66LE6 453 aa15.65■□□□□ 0.1
HDAC6-217ENST00000469223 SPTY2D1Q68D10 685 aaPredicted RBP15.65■□□□□ 0.1
HDAC6-217ENST00000469223 RNF180Q86T96 592 aa15.65■□□□□ 0.1
HDAC6-217ENST00000469223 LENG1Q96BZ8 264 aaPredicted RBP15.65■□□□□ 0.1
HDAC6-217ENST00000469223 TOX2Q96NM4 488 aa15.65■□□□□ 0.1
HDAC6-217ENST00000469223 SIL1Q9H173 461 aa15.65■□□□□ 0.1
HDAC6-217ENST00000469223 MYO5AQ9Y4I1 1855 aaKnown RBP15.65■□□□□ 0.1
HDAC6-217ENST00000469223 PDS5AQ29RF7 1337 aaKnown RBP15.65■□□□□ 0.1
HDAC6-217ENST00000469223 ROBO3Q96MS0 1386 aa15.64■□□□□ 0.09
HDAC6-217ENST00000469223 SPDYE16A6NNV3 312 aaPredicted RBP15.64■□□□□ 0.09
HDAC6-217ENST00000469223 ANP32CO43423 234 aa15.64■□□□□ 0.09
HDAC6-217ENST00000469223 TLL1O43897 1013 aa15.64■□□□□ 0.09
HDAC6-217ENST00000469223 COBLO75128 1261 aa15.64■□□□□ 0.09
HDAC6-217ENST00000469223 EXOSC9Q06265 439 aaKnown RBP15.64■□□□□ 0.09
HDAC6-217ENST00000469223 CCDC102BQ68D86 513 aa15.64■□□□□ 0.09
HDAC6-217ENST00000469223 ERICH6Q7L0X2 663 aa15.64■□□□□ 0.09
HDAC6-217ENST00000469223 WWC1Q8IX03 1113 aa15.64■□□□□ 0.09
HDAC6-217ENST00000469223 CRACR2BQ8N4Y2 399 aaPredicted RBP15.64■□□□□ 0.09
HDAC6-217ENST00000469223 C12orf42Q96LP6 360 aa15.64■□□□□ 0.09
HDAC6-217ENST00000469223 TRIM34Q9BYJ4 488 aa15.64■□□□□ 0.09
HDAC6-217ENST00000469223 PI4KBQ9UBF8 816 aa15.64■□□□□ 0.09
HDAC6-217ENST00000469223 IL16Q14005 1332 aa15.64■□□□□ 0.09
HDAC6-217ENST00000469223 PRR33A8MZF0 331 aa15.63■□□□□ 0.09
HDAC6-217ENST00000469223 VCAM1P19320 739 aa15.63■□□□□ 0.09
HDAC6-217ENST00000469223 LBX2Q6XYB7 198 aa15.63■□□□□ 0.09
HDAC6-217ENST00000469223 CATSPERGQ6ZRH7 1159 aa15.63■□□□□ 0.09
HDAC6-217ENST00000469223 SH3RF3Q8TEJ3 882 aaPredicted RBP15.63■□□□□ 0.09
HDAC6-217ENST00000469223 UIMC1Q96RL1 719 aa15.63■□□□□ 0.09
HDAC6-217ENST00000469223 MOV10L1Q9BXT6 1211 aaKnown RBP15.63■□□□□ 0.09
HDAC6-217ENST00000469223 PPP1R12CQ9BZL4 782 aa15.63■□□□□ 0.09
HDAC6-217ENST00000469223 STARD7Q9NQZ5 370 aa15.63■□□□□ 0.09
HDAC6-217ENST00000469223 ZNF521Q96K83 1311 aa15.63■□□□□ 0.09
HDAC6-217ENST00000469223 MCM3APO60318 1980 aa15.62■□□□□ 0.09
HDAC6-217ENST00000469223 ZFHX2Q9C0A1 2572 aaPredicted RBP15.62■□□□□ 0.09
HDAC6-217ENST00000469223 PI4K2BG5E9Z4 385 aa15.62■□□□□ 0.09
HDAC6-217ENST00000469223 MAP4K4O95819 1239 aaPredicted RBP15.62■□□□□ 0.09
HDAC6-217ENST00000469223 RABGGTBP53611 331 aa15.62■□□□□ 0.09
HDAC6-217ENST00000469223 CD320Q9NPF0 282 aa15.62■□□□□ 0.09
HDAC6-217ENST00000469223 GINM1Q9NU53 330 aa15.62■□□□□ 0.09
HDAC6-217ENST00000469223 COG5Q9UP83 839 aa15.62■□□□□ 0.09
HDAC6-217ENST00000469223 GTPBP6O43824 516 aaPredicted RBP15.61■□□□□ 0.09
HDAC6-217ENST00000469223 GH2P01242 217 aa15.61■□□□□ 0.09
HDAC6-217ENST00000469223 MYOGP15173 224 aa15.61■□□□□ 0.09
HDAC6-217ENST00000469223 ACLYP53396 1101 aa15.61■□□□□ 0.09
HDAC6-217ENST00000469223 CCDC27Q2M243 656 aa15.61■□□□□ 0.09
HDAC6-217ENST00000469223 KRT40Q6A162 431 aa15.61■□□□□ 0.09
HDAC6-217ENST00000469223 TMEM199Q8N511 208 aa15.61■□□□□ 0.09
HDAC6-217ENST00000469223 MAML3Q96JK9 1138 aa15.61■□□□□ 0.09
HDAC6-217ENST00000469223 MTIF3Q9H2K0 278 aaKnown RBP15.61■□□□□ 0.09
HDAC6-217ENST00000469223 CEP126Q9P2H0 1117 aa15.61■□□□□ 0.09
HDAC6-217ENST00000469223 MTCH2Q9Y6C9 303 aa15.61■□□□□ 0.09
HDAC6-217ENST00000469223 C5orf42Q9H799 3197 aa15.61■□□□□ 0.09
HDAC6-217ENST00000469223 RFXAPO00287 272 aa15.6■□□□□ 0.09
HDAC6-217ENST00000469223 STRNO43815 780 aa15.6■□□□□ 0.09
HDAC6-217ENST00000469223 ADAMTS4O75173 837 aa15.6■□□□□ 0.09
HDAC6-217ENST00000469223 GSTO1P78417 241 aa15.6■□□□□ 0.09
HDAC6-217ENST00000469223 MAPKAPK5Q8IW41 473 aa15.6■□□□□ 0.09
HDAC6-217ENST00000469223 NSUN4Q96CB9 384 aaKnown RBP15.6■□□□□ 0.09
HDAC6-217ENST00000469223 DHX36Q9H2U1 1008 aaKnown RBP15.6■□□□□ 0.09
HDAC6-217ENST00000469223 RPAP3Q9H6T3 665 aaPredicted RBP15.6■□□□□ 0.09
HDAC6-217ENST00000469223 IL23AQ9NPF7 189 aa15.6■□□□□ 0.09
HDAC6-217ENST00000469223 SLC5A4Q9NY91 659 aa15.6■□□□□ 0.09
HDAC6-217ENST00000469223 ZBTB22O15209 634 aa15.59■□□□□ 0.09
HDAC6-217ENST00000469223 LDHCP07864 332 aa15.59■□□□□ 0.09
HDAC6-217ENST00000469223 TAL1P17542 331 aaPredicted RBP15.59■□□□□ 0.09
HDAC6-217ENST00000469223 ERCC3P19447 782 aa15.59■□□□□ 0.09
HDAC6-217ENST00000469223 METTL16Q86W50 562 aaKnown RBP15.59■□□□□ 0.09
HDAC6-217ENST00000469223 NUP133Q8WUM0 1156 aa15.59■□□□□ 0.09
HDAC6-217ENST00000469223 FBXL18Q96ME1 805 aa15.59■□□□□ 0.09
HDAC6-217ENST00000469223 SPATC1LQ9H0A9 340 aa15.59■□□□□ 0.09
HDAC6-217ENST00000469223 FLT1P17948 1338 aa15.59■□□□□ 0.09
HDAC6-217ENST00000469223 MROH7Q68CQ1 1323 aa15.59■□□□□ 0.09
HDAC6-217ENST00000469223 SYNRGQ9UMZ2 1314 aa15.59■□□□□ 0.09
HDAC6-217ENST00000469223 MYH8P13535 1937 aa15.58■□□□□ 0.09
HDAC6-217ENST00000469223 CIAO1O76071 339 aa15.58■□□□□ 0.08
HDAC6-217ENST00000469223 CYP2C18P33260 490 aa15.58■□□□□ 0.08
HDAC6-217ENST00000469223 USP14P54578 494 aa15.58■□□□□ 0.08
HDAC6-217ENST00000469223 PI16Q6UXB8 463 aa15.58■□□□□ 0.08
HDAC6-217ENST00000469223 OTOP2Q7RTS6 562 aa15.58■□□□□ 0.08
HDAC6-217ENST00000469223 HLA-CQ95604 372 aa15.58■□□□□ 0.08
HDAC6-217ENST00000469223 PRKRIP1Q9H875 184 aaPredicted RBP15.58■□□□□ 0.08
HDAC6-217ENST00000469223 RAI14Q9P0K7 980 aa15.58■□□□□ 0.08
HDAC6-217ENST00000469223 WDR87Q6ZQQ6 2873 aa15.58■□□□□ 0.08
HDAC6-217ENST00000469223 SCN5AQ14524 2016 aa15.58■□□□□ 0.08
HDAC6-217ENST00000469223 EPOPA6NHQ4 379 aa15.57■□□□□ 0.08
HDAC6-217ENST00000469223 AKR1A1P14550 325 aa15.57■□□□□ 0.08
HDAC6-217ENST00000469223 CSPP1Q1MSJ5 1256 aa15.57■□□□□ 0.08
HDAC6-217ENST00000469223 TBC1D9Q6ZT07 1266 aa15.57■□□□□ 0.08
HDAC6-217ENST00000469223 SHCBP1Q8NEM2 672 aa15.57■□□□□ 0.08
HDAC6-217ENST00000469223 ACER1Q8TDN7 264 aa15.57■□□□□ 0.08
HDAC6-217ENST00000469223 NOL10Q9BSC4 688 aaKnown RBP15.57■□□□□ 0.08
HDAC6-217ENST00000469223 TSEN34Q9BSV6 310 aaKnown RBP15.57■□□□□ 0.08
HDAC6-217ENST00000469223 KIAA1683Q9H0B3 1180 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms