RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 SLF2Q8IX21 1173 aa13.22□□□□□ -0.29
TRAIP-202ENST00000469027 FAM86C1Q9NVL1 165 aa13.22□□□□□ -0.29
TRAIP-202ENST00000469027 GAKO14976 1311 aa13.21□□□□□ -0.29
TRAIP-202ENST00000469027 USP17L15C9J2P7 530 aa13.21□□□□□ -0.29
TRAIP-202ENST00000469027 USP17L13C9JLJ4 530 aa13.21□□□□□ -0.29
TRAIP-202ENST00000469027 USP17L11C9JVI0 530 aa13.21□□□□□ -0.29
TRAIP-202ENST00000469027 USP17L18D6R9N7 530 aa13.21□□□□□ -0.29
TRAIP-202ENST00000469027 USP17L22D6RA61 530 aa13.21□□□□□ -0.29
TRAIP-202ENST00000469027 USP17L17D6RBQ6 530 aa13.21□□□□□ -0.29
TRAIP-202ENST00000469027 USP17L19D6RCP7 530 aa13.21□□□□□ -0.29
TRAIP-202ENST00000469027 USP17L20D6RJB6 530 aa13.21□□□□□ -0.29
TRAIP-202ENST00000469027 TLR3O15455 904 aaKnown RBP13.21□□□□□ -0.29
TRAIP-202ENST00000469027 USP17L24Q0WX57 530 aa13.21□□□□□ -0.29
TRAIP-202ENST00000469027 USP17L2Q6R6M4 530 aa13.21□□□□□ -0.29
TRAIP-202ENST00000469027 VGLL2Q8N8G2 317 aa13.21□□□□□ -0.29
TRAIP-202ENST00000469027 LENG1Q96BZ8 264 aaPredicted RBP13.21□□□□□ -0.29
TRAIP-202ENST00000469027 FEZ1Q99689 392 aa13.21□□□□□ -0.29
TRAIP-202ENST00000469027 UBE2ZQ9H832 354 aaPredicted RBP13.21□□□□□ -0.29
TRAIP-202ENST00000469027 BTBD7Q9P203 1132 aa13.21□□□□□ -0.29
TRAIP-202ENST00000469027 C5orf42Q9H799 3197 aa13.2□□□□□ -0.3
TRAIP-202ENST00000469027 ZNF536O15090 1300 aa13.2□□□□□ -0.3
TRAIP-202ENST00000469027 GDF11O95390 407 aa13.2□□□□□ -0.3
TRAIP-202ENST00000469027 KCNA5P22460 613 aa13.2□□□□□ -0.3
TRAIP-202ENST00000469027 PTCRAQ6ISU1 281 aaPredicted RBP13.2□□□□□ -0.3
TRAIP-202ENST00000469027 GLT1D1Q96MS3 346 aa13.2□□□□□ -0.3
TRAIP-202ENST00000469027 TSEN34Q9BSV6 310 aaKnown RBP13.2□□□□□ -0.3
TRAIP-202ENST00000469027 TRIM34Q9BYJ4 488 aa13.2□□□□□ -0.3
TRAIP-202ENST00000469027 EMILIN3Q9NT22 766 aa13.2□□□□□ -0.3
TRAIP-202ENST00000469027 GNL3LQ9NVN8 582 aaKnown RBP13.2□□□□□ -0.3
TRAIP-202ENST00000469027 HERC5Q9UII4 1024 aaKnown RBP13.2□□□□□ -0.3
TRAIP-202ENST00000469027 F6X3S4 739 aa13.19□□□□□ -0.3
TRAIP-202ENST00000469027 STRNO43815 780 aa13.19□□□□□ -0.3
TRAIP-202ENST00000469027 COBLO75128 1261 aa13.19□□□□□ -0.3
TRAIP-202ENST00000469027 GRB10Q13322 594 aa13.19□□□□□ -0.3
TRAIP-202ENST00000469027 ABCF2Q9UG63 623 aa13.19□□□□□ -0.3
TRAIP-202ENST00000469027 SALL1Q9NSC2 1324 aa13.18□□□□□ -0.3
TRAIP-202ENST00000469027 MOXD2PA6NHM9 499 aa13.18□□□□□ -0.3
TRAIP-202ENST00000469027 FGFR2P21802 821 aa13.18□□□□□ -0.3
TRAIP-202ENST00000469027 CCL23P55773 120 aa13.18□□□□□ -0.3
TRAIP-202ENST00000469027 KCNA10Q16322 511 aa13.18□□□□□ -0.3
TRAIP-202ENST00000469027 SHROOM1Q2M3G4 852 aaPredicted RBP13.18□□□□□ -0.3
TRAIP-202ENST00000469027 LEXMQ3ZCV2 418 aa13.18□□□□□ -0.3
TRAIP-202ENST00000469027 BEND3Q5T5X7 828 aa13.18□□□□□ -0.3
TRAIP-202ENST00000469027 ZGPATQ8N5A5 531 aaKnown RBP13.18□□□□□ -0.3
TRAIP-202ENST00000469027 TSR2Q969E8 191 aaKnown RBP13.18□□□□□ -0.3
TRAIP-202ENST00000469027 SUCLG2Q96I99 432 aa13.18□□□□□ -0.3
TRAIP-202ENST00000469027 MAML3Q96JK9 1138 aa13.18□□□□□ -0.3
TRAIP-202ENST00000469027 PRRX2Q99811 253 aa13.18□□□□□ -0.3
TRAIP-202ENST00000469027 DENND2AQ9ULE3 1009 aa13.18□□□□□ -0.3
TRAIP-202ENST00000469027 ZNF236Q9UL36 1845 aa13.18□□□□□ -0.3
TRAIP-202ENST00000469027 MROH7-TTC4A0A0A0MT08 1334 aa13.17□□□□□ -0.3
TRAIP-202ENST00000469027 POTEB3A0JP26 581 aa13.17□□□□□ -0.3
TRAIP-202ENST00000469027 AKR1A1P14550 325 aa13.17□□□□□ -0.3
TRAIP-202ENST00000469027 JAG1P78504 1218 aa13.17□□□□□ -0.3
TRAIP-202ENST00000469027 DDX10Q13206 875 aaKnown RBP13.17□□□□□ -0.3
TRAIP-202ENST00000469027 TWISTNBQ3B726 338 aaPredicted RBP13.17□□□□□ -0.3
TRAIP-202ENST00000469027 IER5LQ5T953 404 aa13.17□□□□□ -0.3
TRAIP-202ENST00000469027 POTEBQ6S5H4 581 aa13.17□□□□□ -0.3
TRAIP-202ENST00000469027 CRACR2BQ8N4Y2 399 aaPredicted RBP13.17□□□□□ -0.3
TRAIP-202ENST00000469027 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.17□□□□□ -0.3
TRAIP-202ENST00000469027 KLHDC4Q8TBB5 520 aa13.17□□□□□ -0.3
TRAIP-202ENST00000469027 LPIN2Q92539 896 aa13.17□□□□□ -0.3
TRAIP-202ENST00000469027 MOV10L1Q9BXT6 1211 aaKnown RBP13.17□□□□□ -0.3
TRAIP-202ENST00000469027 HIPK3Q9H422 1215 aa13.17□□□□□ -0.3
TRAIP-202ENST00000469027 ZBTB21Q9ULJ3 1066 aa13.17□□□□□ -0.3
TRAIP-202ENST00000469027 EPG5Q9HCE0 2579 aa13.16□□□□□ -0.3
TRAIP-202ENST00000469027 A0A0U1RQG5 324 aaPredicted RBP13.16□□□□□ -0.3
TRAIP-202ENST00000469027 ADAMTS4O75173 837 aa13.16□□□□□ -0.3
TRAIP-202ENST00000469027 ERCC3P19447 782 aa13.16□□□□□ -0.3
TRAIP-202ENST00000469027 ID4P47928 161 aa13.16□□□□□ -0.3
TRAIP-202ENST00000469027 RHBDL3P58872 404 aa13.16□□□□□ -0.3
TRAIP-202ENST00000469027 CATSPERGQ6ZRH7 1159 aa13.16□□□□□ -0.3
TRAIP-202ENST00000469027 NRBP1Q9UHY1 535 aa13.16□□□□□ -0.3
TRAIP-202ENST00000469027 ELP1O95163 1332 aa13.15□□□□□ -0.3
TRAIP-202ENST00000469027 UMODL1Q5DID0 1318 aa13.15□□□□□ -0.3
TRAIP-202ENST00000469027 SYNRGQ9UMZ2 1314 aa13.15□□□□□ -0.3
TRAIP-202ENST00000469027 RIF1Q5UIP0 2472 aaKnown RBP13.15□□□□□ -0.3
TRAIP-202ENST00000469027 SPDYE16A6NNV3 312 aaPredicted RBP13.15□□□□□ -0.3
TRAIP-202ENST00000469027 ARVCFO00192 962 aa13.15□□□□□ -0.3
TRAIP-202ENST00000469027 NPM3O75607 178 aaKnown RBP13.15□□□□□ -0.3
TRAIP-202ENST00000469027 TAL1P17542 331 aaPredicted RBP13.15□□□□□ -0.3
TRAIP-202ENST00000469027 TAP1Q03518 808 aa13.15□□□□□ -0.3
TRAIP-202ENST00000469027 PLS1Q14651 629 aa13.15□□□□□ -0.3
TRAIP-202ENST00000469027 NCAPG2Q86XI2 1143 aa13.15□□□□□ -0.3
TRAIP-202ENST00000469027 FAM126BQ8IXS8 530 aa13.15□□□□□ -0.3
TRAIP-202ENST00000469027 RPUSD2Q8IZ73 545 aaKnown RBP13.15□□□□□ -0.3
TRAIP-202ENST00000469027 GDPD5Q8WTR4 605 aa13.15□□□□□ -0.3
TRAIP-202ENST00000469027 ATOH1Q92858 354 aaPredicted RBP13.15□□□□□ -0.3
TRAIP-202ENST00000469027 PI4KBQ9UBF8 816 aa13.15□□□□□ -0.3
TRAIP-202ENST00000469027 CACNA1HO95180 2353 aa13.15□□□□□ -0.3
TRAIP-202ENST00000469027 VCAM1P19320 739 aa13.14□□□□□ -0.31
TRAIP-202ENST00000469027 CDK7P50613 346 aa13.14□□□□□ -0.31
TRAIP-202ENST00000469027 TCF15Q12870 199 aa13.14□□□□□ -0.31
TRAIP-202ENST00000469027 LBX2Q6XYB7 198 aa13.14□□□□□ -0.31
TRAIP-202ENST00000469027 SUGP1Q8IWZ8 645 aaKnown RBP13.14□□□□□ -0.31
TRAIP-202ENST00000469027 FAM163AQ96GL9 167 aaPredicted RBP13.14□□□□□ -0.31
TRAIP-202ENST00000469027 CDCA7LQ96GN5 454 aa13.14□□□□□ -0.31
TRAIP-202ENST00000469027 UPF3BQ9BZI7 483 aaKnown RBP13.14□□□□□ -0.31
TRAIP-202ENST00000469027 SPATC1LQ9H0A9 340 aa13.14□□□□□ -0.31
TRAIP-202ENST00000469027 BICC1Q9H694 974 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms