RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 PAK2Q13177 524 aa8.03□□□□□ -1.12
LSM5-209ENST00000468872 FAM196AQ6ZSG2 479 aa8.03□□□□□ -1.12
LSM5-209ENST00000468872 DTWD2Q8NBA8 298 aa8.03□□□□□ -1.12
LSM5-209ENST00000468872 DRC1Q96MC2 740 aa8.03□□□□□ -1.12
LSM5-209ENST00000468872 SLAMF8Q9P0V8 285 aa8.03□□□□□ -1.12
LSM5-209ENST00000468872 KLHL3Q9UH77 587 aa8.03□□□□□ -1.12
LSM5-209ENST00000468872 LRRC10BA6NIK2 292 aa8.02□□□□□ -1.13
LSM5-209ENST00000468872 CHURC1-FNTBB4DL54 471 aa8.02□□□□□ -1.13
LSM5-209ENST00000468872 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.02□□□□□ -1.13
LSM5-209ENST00000468872 DNAJA2O60884 412 aa8.02□□□□□ -1.13
LSM5-209ENST00000468872 TPP2P29144 1249 aaPredicted RBP8.02□□□□□ -1.13
LSM5-209ENST00000468872 GJA8P48165 433 aa8.02□□□□□ -1.13
LSM5-209ENST00000468872 FBXL19Q6PCT2 694 aa8.02□□□□□ -1.13
LSM5-209ENST00000468872 CCDC120Q96HB5 630 aa8.02□□□□□ -1.13
LSM5-209ENST00000468872 KIRREL1Q96J84 757 aa8.02□□□□□ -1.13
LSM5-209ENST00000468872 TRIT1Q9H3H1 467 aaKnown RBP8.02□□□□□ -1.13
LSM5-209ENST00000468872 FAM53CQ9NYF3 392 aa8.02□□□□□ -1.13
LSM5-209ENST00000468872 GLI1P08151 1106 aa8.01□□□□□ -1.13
LSM5-209ENST00000468872 SRFP11831 508 aa8.01□□□□□ -1.13
LSM5-209ENST00000468872 EIF4A3P38919 411 aaKnown RBP8.01□□□□□ -1.13
LSM5-209ENST00000468872 GNL2Q13823 731 aaKnown RBP8.01□□□□□ -1.13
LSM5-209ENST00000468872 SF3A1Q15459 793 aaKnown RBP8.01□□□□□ -1.13
LSM5-209ENST00000468872 GAB4Q2WGN9 574 aa8.01□□□□□ -1.13
LSM5-209ENST00000468872 CREG2Q8IUH2 290 aa8.01□□□□□ -1.13
LSM5-209ENST00000468872 RNF141Q8WVD5 230 aa8.01□□□□□ -1.13
LSM5-209ENST00000468872 LIN37Q96GY3 246 aaPredicted RBP8.01□□□□□ -1.13
LSM5-209ENST00000468872 CCDC74BQ96LY2 380 aa8.01□□□□□ -1.13
LSM5-209ENST00000468872 SPON2Q9BUD6 331 aa8.01□□□□□ -1.13
LSM5-209ENST00000468872 GPR62Q9BZJ7 368 aa8.01□□□□□ -1.13
LSM5-209ENST00000468872 KCNQ5Q9NR82 932 aa8.01□□□□□ -1.13
LSM5-209ENST00000468872 GPATCH2Q9NW75 528 aa8.01□□□□□ -1.13
LSM5-209ENST00000468872 KCNH3Q9ULD8 1083 aa8.01□□□□□ -1.13
LSM5-209ENST00000468872 DNAJC25-GNG10A0A024R161 153 aa8□□□□□ -1.13
LSM5-209ENST00000468872 TLR3O15455 904 aaKnown RBP8□□□□□ -1.13
LSM5-209ENST00000468872 LRRN2O75325 713 aa8□□□□□ -1.13
LSM5-209ENST00000468872 JAG1P78504 1218 aa8□□□□□ -1.13
LSM5-209ENST00000468872 FZD5Q13467 585 aa8□□□□□ -1.13
LSM5-209ENST00000468872 ZNF124Q15973 351 aa8□□□□□ -1.13
LSM5-209ENST00000468872 MLANAQ16655 118 aa8□□□□□ -1.13
LSM5-209ENST00000468872 RALGPS1Q5JS13 557 aa8□□□□□ -1.13
LSM5-209ENST00000468872 TTC6Q86TZ1 520 aa8□□□□□ -1.13
LSM5-209ENST00000468872 KIAA0825Q8IV33 1275 aa8□□□□□ -1.13
LSM5-209ENST00000468872 BAHD1Q8TBE0 780 aaPredicted RBP8□□□□□ -1.13
LSM5-209ENST00000468872 ZNF296Q8WUU4 475 aaPredicted RBP8□□□□□ -1.13
LSM5-209ENST00000468872 GPRASP2Q96D09 838 aa8□□□□□ -1.13
LSM5-209ENST00000468872 DNAJA1P31689 397 aaKnown RBP7.99□□□□□ -1.13
LSM5-209ENST00000468872 MESP2Q0VG99 397 aa7.99□□□□□ -1.13
LSM5-209ENST00000468872 CWF19L2Q2TBE0 894 aaKnown RBP7.99□□□□□ -1.13
LSM5-209ENST00000468872 TMEM67Q5HYA8 995 aa7.99□□□□□ -1.13
LSM5-209ENST00000468872 TSPYL5Q86VY4 417 aaPredicted RBP7.99□□□□□ -1.13
LSM5-209ENST00000468872 KSR1Q8IVT5 923 aa7.99□□□□□ -1.13
LSM5-209ENST00000468872 PHACTR4Q8IZ21 702 aa7.99□□□□□ -1.13
LSM5-209ENST00000468872 EAF1Q96JC9 268 aaPredicted RBP7.99□□□□□ -1.13
LSM5-209ENST00000468872 KREMEN1Q96MU8 473 aa7.99□□□□□ -1.13
LSM5-209ENST00000468872 GMLQ99445 158 aa7.99□□□□□ -1.13
LSM5-209ENST00000468872 LRRC3Q9BY71 257 aa7.99□□□□□ -1.13
LSM5-209ENST00000468872 TANGO6Q9C0B7 1094 aa7.99□□□□□ -1.13
LSM5-209ENST00000468872 SUPT16HQ9Y5B9 1047 aaKnown RBP7.99□□□□□ -1.13
LSM5-209ENST00000468872 ROBO2Q9HCK4 1378 aa7.98□□□□□ -1.13
LSM5-209ENST00000468872 GREM1O60565 184 aa7.98□□□□□ -1.13
LSM5-209ENST00000468872 RASGRP4Q8TDF6 673 aa7.98□□□□□ -1.13
LSM5-209ENST00000468872 KIF2CQ99661 725 aa7.98□□□□□ -1.13
LSM5-209ENST00000468872 ASPNQ9BXN1 380 aa7.98□□□□□ -1.13
LSM5-209ENST00000468872 BRMS1Q9HCU9 246 aa7.98□□□□□ -1.13
LSM5-209ENST00000468872 PPP1R1BQ9UD71 204 aaPredicted RBP7.98□□□□□ -1.13
LSM5-209ENST00000468872 DUSP13Q9UII6 198 aa7.98□□□□□ -1.13
LSM5-209ENST00000468872 TMEM59LQ9UK28 342 aa7.98□□□□□ -1.13
LSM5-209ENST00000468872 HK2P52789 917 aa7.97□□□□□ -1.13
LSM5-209ENST00000468872 ARID5AQ03989 594 aa7.97□□□□□ -1.13
LSM5-209ENST00000468872 MPZL3Q6UWV2 235 aa7.97□□□□□ -1.13
LSM5-209ENST00000468872 FAM84AQ96KN4 292 aa7.97□□□□□ -1.13
LSM5-209ENST00000468872 SLC38A3Q99624 504 aa7.97□□□□□ -1.13
LSM5-209ENST00000468872 ADAMTS10Q9H324 1103 aa7.97□□□□□ -1.13
LSM5-209ENST00000468872 PCDHB14Q9Y5E9 798 aa7.97□□□□□ -1.13
LSM5-209ENST00000468872 SLC22A31A6NKX4 558 aa7.96□□□□□ -1.14
LSM5-209ENST00000468872 RAC2P15153 192 aa7.96□□□□□ -1.14
LSM5-209ENST00000468872 ATF4P18848 351 aaPredicted RBP7.96□□□□□ -1.14
LSM5-209ENST00000468872 CRKP46108 304 aa7.96□□□□□ -1.14
LSM5-209ENST00000468872 ERVFC1P60507 584 aa7.96□□□□□ -1.14
LSM5-209ENST00000468872 EGR3Q06889 387 aa7.96□□□□□ -1.14
LSM5-209ENST00000468872 MLECQ14165 292 aa7.96□□□□□ -1.14
LSM5-209ENST00000468872 PKN1Q16512 942 aa7.96□□□□□ -1.14
LSM5-209ENST00000468872 PRR23BQ6ZRT6 265 aa7.96□□□□□ -1.14
LSM5-209ENST00000468872 NT5C1AQ9BXI3 368 aa7.96□□□□□ -1.14
LSM5-209ENST00000468872 FGRP09769 529 aa7.95□□□□□ -1.14
LSM5-209ENST00000468872 LTKP29376 864 aa7.95□□□□□ -1.14
LSM5-209ENST00000468872 GBP1P32455 592 aa7.95□□□□□ -1.14
LSM5-209ENST00000468872 VPS37DQ86XT2 251 aa7.95□□□□□ -1.14
LSM5-209ENST00000468872 ABHD4Q8TB40 342 aa7.95□□□□□ -1.14
LSM5-209ENST00000468872 UBXN4Q92575 508 aa7.95□□□□□ -1.14
LSM5-209ENST00000468872 VWCEQ96DN2 955 aa7.95□□□□□ -1.14
LSM5-209ENST00000468872 UBP1Q9NZI7 540 aa7.95□□□□□ -1.14
LSM5-209ENST00000468872 GMIPQ9P107 970 aa7.95□□□□□ -1.14
LSM5-209ENST00000468872 PCDHA11Q9Y5I1 949 aa7.95□□□□□ -1.14
LSM5-209ENST00000468872 SHISA3A0PJX4 238 aa7.94□□□□□ -1.14
LSM5-209ENST00000468872 RGS13O14921 159 aa7.94□□□□□ -1.14
LSM5-209ENST00000468872 ATE1O95260 518 aa7.94□□□□□ -1.14
LSM5-209ENST00000468872 HPXP02790 462 aa7.94□□□□□ -1.14
LSM5-209ENST00000468872 ARSHQ5FYA8 562 aa7.94□□□□□ -1.14
LSM5-209ENST00000468872 MCF2L2Q86YR7 1114 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms