RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 MTMR2Q13614 643 aa17.83■□□□□ 0.44
NPHP4-205ENST00000466897 WTAPQ15007 396 aa17.83■□□□□ 0.44
NPHP4-205ENST00000466897 RABEP1Q15276 862 aa17.83■□□□□ 0.44
NPHP4-205ENST00000466897 TMEM67Q5HYA8 995 aa17.83■□□□□ 0.44
NPHP4-205ENST00000466897 IFIT1BQ5T764 474 aaKnown RBP17.83■□□□□ 0.44
NPHP4-205ENST00000466897 CHST3Q7LGC8 479 aa17.83■□□□□ 0.44
NPHP4-205ENST00000466897 PRRT2Q7Z6L0 340 aaPredicted RBP17.83■□□□□ 0.44
NPHP4-205ENST00000466897 PROCA1Q8NCQ7 364 aaPredicted RBP17.83■□□□□ 0.44
NPHP4-205ENST00000466897 ACER1Q8TDN7 264 aa17.83■□□□□ 0.44
NPHP4-205ENST00000466897 FEZ1Q99689 392 aa17.83■□□□□ 0.44
NPHP4-205ENST00000466897 TMEM47Q9BQJ4 181 aa17.83■□□□□ 0.44
NPHP4-205ENST00000466897 VCPKMTQ9H867 229 aa17.83■□□□□ 0.44
NPHP4-205ENST00000466897 TESPA1A2RU30 521 aaPredicted RBP17.82■□□□□ 0.44
NPHP4-205ENST00000466897 TRIM75PA6NK02 468 aa17.82■□□□□ 0.44
NPHP4-205ENST00000466897 HTRA3P83110 453 aa17.82■□□□□ 0.44
NPHP4-205ENST00000466897 NOGQ13253 232 aa17.82■□□□□ 0.44
NPHP4-205ENST00000466897 USP17L2Q6R6M4 530 aa17.82■□□□□ 0.44
NPHP4-205ENST00000466897 MS4A4AQ96JQ5 239 aa17.82■□□□□ 0.44
NPHP4-205ENST00000466897 UPF3BQ9BZI7 483 aaKnown RBP17.82■□□□□ 0.44
NPHP4-205ENST00000466897 GOPCQ9HD26 462 aa17.82■□□□□ 0.44
NPHP4-205ENST00000466897 RLFQ13129 1914 aa17.82■□□□□ 0.44
NPHP4-205ENST00000466897 MANSC4A6NHS7 340 aaPredicted RBP17.81■□□□□ 0.44
NPHP4-205ENST00000466897 CETPP11597 493 aa17.81■□□□□ 0.44
NPHP4-205ENST00000466897 CPA1P15085 419 aa17.81■□□□□ 0.44
NPHP4-205ENST00000466897 EVCP57679 992 aa17.81■□□□□ 0.44
NPHP4-205ENST00000466897 INHBEP58166 350 aa17.81■□□□□ 0.44
NPHP4-205ENST00000466897 FASTKD5Q7L8L6 764 aaKnown RBP17.81■□□□□ 0.44
NPHP4-205ENST00000466897 REM2Q8IYK8 340 aaPredicted RBP17.81■□□□□ 0.44
NPHP4-205ENST00000466897 KAT14Q9H8E8 782 aa17.81■□□□□ 0.44
NPHP4-205ENST00000466897 F5H6K3 240 aa17.8■□□□□ 0.44
NPHP4-205ENST00000466897 RCAN1P53805 252 aa17.8■□□□□ 0.44
NPHP4-205ENST00000466897 ATP2B2Q01814 1243 aa17.8■□□□□ 0.44
NPHP4-205ENST00000466897 KLRC3Q07444 240 aa17.8■□□□□ 0.44
NPHP4-205ENST00000466897 ANKRD1Q15327 319 aa17.8■□□□□ 0.44
NPHP4-205ENST00000466897 CYP4F22Q6NT55 531 aa17.8■□□□□ 0.44
NPHP4-205ENST00000466897 Q6ZUG5 572 aa17.8■□□□□ 0.44
NPHP4-205ENST00000466897 LRRC47Q8N1G4 583 aaKnown RBP17.8■□□□□ 0.44
NPHP4-205ENST00000466897 PNMA1Q8ND90 353 aa17.8■□□□□ 0.44
NPHP4-205ENST00000466897 GMCL1Q96IK5 515 aa17.8■□□□□ 0.44
NPHP4-205ENST00000466897 CAPNS2Q96L46 248 aa17.8■□□□□ 0.44
NPHP4-205ENST00000466897 MAP3K14Q99558 947 aa17.8■□□□□ 0.44
NPHP4-205ENST00000466897 EMILIN3Q9NT22 766 aa17.8■□□□□ 0.44
NPHP4-205ENST00000466897 PDRG1Q9NUG6 133 aa17.8■□□□□ 0.44
NPHP4-205ENST00000466897 TMOD4Q9NZQ9 345 aa17.8■□□□□ 0.44
NPHP4-205ENST00000466897 NDUFB10O96000 172 aa17.79■□□□□ 0.44
NPHP4-205ENST00000466897 SNHG28P0DPA3 235 aa17.79■□□□□ 0.44
NPHP4-205ENST00000466897 NEK4P51957 841 aa17.79■□□□□ 0.44
NPHP4-205ENST00000466897 HMGCS2P54868 508 aa17.79■□□□□ 0.44
NPHP4-205ENST00000466897 MOGSQ13724 837 aa17.79■□□□□ 0.44
NPHP4-205ENST00000466897 JMYQ8N9B5 988 aa17.79■□□□□ 0.44
NPHP4-205ENST00000466897 TCEANC2Q96MN5 208 aa17.79■□□□□ 0.44
NPHP4-205ENST00000466897 LRRC2Q9BYS8 371 aa17.79■□□□□ 0.44
NPHP4-205ENST00000466897 ZCCHC17Q9NP64 241 aaKnown RBP17.79■□□□□ 0.44
NPHP4-205ENST00000466897 SLC45A1Q9Y2W3 748 aa17.79■□□□□ 0.44
NPHP4-205ENST00000466897 NID2Q14112 1375 aa17.79■□□□□ 0.44
NPHP4-205ENST00000466897 CEP350Q5VT06 3117 aa17.78■□□□□ 0.44
NPHP4-205ENST00000466897 A0A0G2JMZ2 1700 aa17.78■□□□□ 0.44
NPHP4-205ENST00000466897 WDR33Q9C0J8 1336 aaKnown RBP17.78■□□□□ 0.44
NPHP4-205ENST00000466897 CCDC69A6NI79 296 aa17.78■□□□□ 0.44
NPHP4-205ENST00000466897 WDR46O15213 610 aaKnown RBP17.78■□□□□ 0.44
NPHP4-205ENST00000466897 DDAH1O94760 285 aa17.78■□□□□ 0.44
NPHP4-205ENST00000466897 CALM1P0DP23 149 aa17.78■□□□□ 0.44
NPHP4-205ENST00000466897 CALM2P0DP24 149 aa17.78■□□□□ 0.44
NPHP4-205ENST00000466897 CALM3P0DP25 149 aa17.78■□□□□ 0.44
NPHP4-205ENST00000466897 MAP2K2P36507 400 aa17.78■□□□□ 0.44
NPHP4-205ENST00000466897 FGD1P98174 961 aa17.78■□□□□ 0.44
NPHP4-205ENST00000466897 SREBF2Q12772 1141 aa17.78■□□□□ 0.44
NPHP4-205ENST00000466897 TROAPQ12815 778 aa17.78■□□□□ 0.44
NPHP4-205ENST00000466897 TOB2Q14106 344 aaPredicted RBP17.78■□□□□ 0.44
NPHP4-205ENST00000466897 CATIPQ7Z7H3 387 aa17.78■□□□□ 0.44
NPHP4-205ENST00000466897 DCAF4Q8WV16 495 aa17.78■□□□□ 0.44
NPHP4-205ENST00000466897 SENP2Q9HC62 589 aa17.78■□□□□ 0.44
NPHP4-205ENST00000466897 GPHNQ9NQX3 736 aaPredicted RBP17.78■□□□□ 0.44
NPHP4-205ENST00000466897 AGTPBP1Q9UPW5 1226 aa17.78■□□□□ 0.44
NPHP4-205ENST00000466897 CCL15-CCL14A0A0B4J2E2 113 aa17.77■□□□□ 0.44
NPHP4-205ENST00000466897 PDHBP11177 359 aa17.77■□□□□ 0.44
NPHP4-205ENST00000466897 VCAM1P19320 739 aa17.77■□□□□ 0.44
NPHP4-205ENST00000466897 CCL15Q16663 113 aa17.77■□□□□ 0.44
NPHP4-205ENST00000466897 SLFN13Q68D06 897 aa17.77■□□□□ 0.44
NPHP4-205ENST00000466897 APOA5Q6Q788 366 aa17.77■□□□□ 0.44
NPHP4-205ENST00000466897 PAXIP1Q6ZW49 1069 aaPredicted RBP17.77■□□□□ 0.44
NPHP4-205ENST00000466897 ZNF654Q8IZM8 581 aa17.77■□□□□ 0.44
NPHP4-205ENST00000466897 BRF1Q92994 677 aa17.77■□□□□ 0.44
NPHP4-205ENST00000466897 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.77■□□□□ 0.44
NPHP4-205ENST00000466897 ST18O60284 1047 aa17.76■□□□□ 0.43
NPHP4-205ENST00000466897 HOXA7P31268 230 aaPredicted RBP17.76■□□□□ 0.43
NPHP4-205ENST00000466897 TM4SF4P48230 202 aa17.76■□□□□ 0.43
NPHP4-205ENST00000466897 VEGFBP49765 207 aa17.76■□□□□ 0.43
NPHP4-205ENST00000466897 PABPC4Q13310 644 aaKnown RBP eCLIP17.76■□□□□ 0.43
NPHP4-205ENST00000466897 ZYXQ15942 572 aaKnown RBP17.76■□□□□ 0.43
NPHP4-205ENST00000466897 KIAA1755Q5JYT7 1200 aa17.76■□□□□ 0.43
NPHP4-205ENST00000466897 NFXL1Q6ZNB6 911 aa17.76■□□□□ 0.43
NPHP4-205ENST00000466897 ANKRD23Q86SG2 305 aa17.76■□□□□ 0.43
NPHP4-205ENST00000466897 BRI3BPQ8WY22 251 aa17.76■□□□□ 0.43
NPHP4-205ENST00000466897 SLC12A7Q9Y666 1083 aa17.76■□□□□ 0.43
NPHP4-205ENST00000466897 COL11A1P12107 1806 aaPredicted RBP17.75■□□□□ 0.43
NPHP4-205ENST00000466897 MYH6P13533 1939 aa17.75■□□□□ 0.43
NPHP4-205ENST00000466897 PLA2G6O60733 806 aa17.75■□□□□ 0.43
NPHP4-205ENST00000466897 SLC1A4P43007 532 aa17.75■□□□□ 0.43
NPHP4-205ENST00000466897 AK2P54819 239 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms