RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 SNAP47Q5SQN1 464 aa5.58□□□□□ -1.52
GTF3C3-209ENST00000466862 FBXL19Q6PCT2 694 aa5.58□□□□□ -1.52
GTF3C3-209ENST00000466862 MRS2Q9HD23 443 aa5.58□□□□□ -1.52
GTF3C3-209ENST00000466862 GPATCH2Q9NW75 528 aa5.58□□□□□ -1.52
GTF3C3-209ENST00000466862 UBOX5O94941 541 aa5.57□□□□□ -1.52
GTF3C3-209ENST00000466862 HK2P52789 917 aa5.57□□□□□ -1.52
GTF3C3-209ENST00000466862 TEKQ02763 1124 aa5.57□□□□□ -1.52
GTF3C3-209ENST00000466862 EGR3Q06889 387 aa5.57□□□□□ -1.52
GTF3C3-209ENST00000466862 PKN1Q16512 942 aa5.57□□□□□ -1.52
GTF3C3-209ENST00000466862 MPZL3Q6UWV2 235 aa5.57□□□□□ -1.52
GTF3C3-209ENST00000466862 RELL1Q8IUW5 271 aa5.57□□□□□ -1.52
GTF3C3-209ENST00000466862 ABHD4Q8TB40 342 aa5.57□□□□□ -1.52
GTF3C3-209ENST00000466862 CCDC74BQ96LY2 380 aa5.57□□□□□ -1.52
GTF3C3-209ENST00000466862 PPP1R16BQ96T49 567 aa5.57□□□□□ -1.52
GTF3C3-209ENST00000466862 SLC38A3Q99624 504 aa5.57□□□□□ -1.52
GTF3C3-209ENST00000466862 G6PC3Q9BUM1 346 aa5.57□□□□□ -1.52
GTF3C3-209ENST00000466862 EBF1Q9UH73 591 aa5.57□□□□□ -1.52
GTF3C3-209ENST00000466862 KCNH3Q9ULD8 1083 aa5.57□□□□□ -1.52
GTF3C3-209ENST00000466862 ATE1O95260 518 aa5.56□□□□□ -1.52
GTF3C3-209ENST00000466862 TRHRP34981 398 aaPredicted RBP5.56□□□□□ -1.52
GTF3C3-209ENST00000466862 LDLRAD1Q5T700 205 aa5.56□□□□□ -1.52
GTF3C3-209ENST00000466862 OVOS1Q6IE37 1185 aa5.56□□□□□ -1.52
GTF3C3-209ENST00000466862 FBXO15Q8NCQ5 510 aaPredicted RBP5.56□□□□□ -1.52
GTF3C3-209ENST00000466862 PDZD8Q8NEN9 1154 aa5.56□□□□□ -1.52
GTF3C3-209ENST00000466862 KIF2CQ99661 725 aa5.56□□□□□ -1.52
GTF3C3-209ENST00000466862 HDAC8Q9BY41 377 aa5.56□□□□□ -1.52
GTF3C3-209ENST00000466862 RNF32Q9H0A6 362 aa5.56□□□□□ -1.52
GTF3C3-209ENST00000466862 NSUN3Q9H649 340 aaKnown RBP5.56□□□□□ -1.52
GTF3C3-209ENST00000466862 KCNK12Q9HB15 430 aa5.56□□□□□ -1.52
GTF3C3-209ENST00000466862 CD320Q9NPF0 282 aa5.56□□□□□ -1.52
GTF3C3-209ENST00000466862 ADAMTS1Q9UHI8 967 aa5.56□□□□□ -1.52
GTF3C3-209ENST00000466862 SLC22A31A6NKX4 558 aa5.55□□□□□ -1.52
GTF3C3-209ENST00000466862 MINDY4BA8MYZ0 360 aa5.55□□□□□ -1.52
GTF3C3-209ENST00000466862 RGS13O14921 159 aa5.55□□□□□ -1.52
GTF3C3-209ENST00000466862 TLR3O15455 904 aaKnown RBP5.55□□□□□ -1.52
GTF3C3-209ENST00000466862 EFEMP2O95967 443 aa5.55□□□□□ -1.52
GTF3C3-209ENST00000466862 MED14OSP0DP75 135 aa5.55□□□□□ -1.52
GTF3C3-209ENST00000466862 RAC2P15153 192 aa5.55□□□□□ -1.52
GTF3C3-209ENST00000466862 NR0B2Q15466 257 aa5.55□□□□□ -1.52
GTF3C3-209ENST00000466862 KRTAP19-4Q3LI73 84 aa5.55□□□□□ -1.52
GTF3C3-209ENST00000466862 SYDE1Q6ZW31 735 aaPredicted RBP5.55□□□□□ -1.52
GTF3C3-209ENST00000466862 MYLIPQ8WY64 445 aa5.55□□□□□ -1.52
GTF3C3-209ENST00000466862 DIRC2Q96SL1 478 aa5.55□□□□□ -1.52
GTF3C3-209ENST00000466862 GZF1Q9H116 711 aaPredicted RBP5.55□□□□□ -1.52
GTF3C3-209ENST00000466862 GMIPQ9P107 970 aa5.55□□□□□ -1.52
GTF3C3-209ENST00000466862 SUPT16HQ9Y5B9 1047 aaKnown RBP5.55□□□□□ -1.52
GTF3C3-209ENST00000466862 ROBO2Q9HCK4 1378 aa5.55□□□□□ -1.52
GTF3C3-209ENST00000466862 NOTOA8MTQ0 251 aa5.54□□□□□ -1.52
GTF3C3-209ENST00000466862 C1QTNF9P0C862 333 aa5.54□□□□□ -1.52
GTF3C3-209ENST00000466862 CFPP27918 469 aa5.54□□□□□ -1.52
GTF3C3-209ENST00000466862 LTKP29376 864 aa5.54□□□□□ -1.52
GTF3C3-209ENST00000466862 EIF4A3P38919 411 aaKnown RBP5.54□□□□□ -1.52
GTF3C3-209ENST00000466862 RAP1GAPP47736 663 aa5.54□□□□□ -1.52
GTF3C3-209ENST00000466862 CWF19L2Q2TBE0 894 aaKnown RBP5.54□□□□□ -1.52
GTF3C3-209ENST00000466862 DIEXFQ68CQ4 756 aaKnown RBP5.54□□□□□ -1.52
GTF3C3-209ENST00000466862 LCNL1Q6ZST4 164 aa5.54□□□□□ -1.52
GTF3C3-209ENST00000466862 LILRA2Q8N149 483 aa5.54□□□□□ -1.52
GTF3C3-209ENST00000466862 LINC01599Q8WXQ3 324 aa5.54□□□□□ -1.52
GTF3C3-209ENST00000466862 EPB41L4BQ9H329 900 aa5.54□□□□□ -1.52
GTF3C3-209ENST00000466862 EHMT1Q9H9B1 1298 aa5.54□□□□□ -1.52
GTF3C3-209ENST00000466862 BRMS1Q9HCU9 246 aa5.54□□□□□ -1.52
GTF3C3-209ENST00000466862 PCDHB14Q9Y5E9 798 aa5.54□□□□□ -1.52
GTF3C3-209ENST00000466862 MEIS3P2A8K0S8 358 aa5.53□□□□□ -1.52
GTF3C3-209ENST00000466862 GLDCP23378 1020 aa5.53□□□□□ -1.52
GTF3C3-209ENST00000466862 POLR2BP30876 1174 aaKnown RBP5.53□□□□□ -1.52
GTF3C3-209ENST00000466862 TNNI2P48788 182 aa5.53□□□□□ -1.52
GTF3C3-209ENST00000466862 ARSHQ5FYA8 562 aa5.53□□□□□ -1.52
GTF3C3-209ENST00000466862 CDCP2Q5VXM1 449 aa5.53□□□□□ -1.52
GTF3C3-209ENST00000466862 PHACTR4Q8IZ21 702 aa5.53□□□□□ -1.52
GTF3C3-209ENST00000466862 SYTL5Q8TDW5 730 aaPredicted RBP5.53□□□□□ -1.52
GTF3C3-209ENST00000466862 SHISA4Q96DD7 197 aa5.53□□□□□ -1.52
GTF3C3-209ENST00000466862 BCL2L13Q9BXK5 485 aa5.53□□□□□ -1.52
GTF3C3-209ENST00000466862 KRTAP4-5Q9BYR2 181 aa5.53□□□□□ -1.52
GTF3C3-209ENST00000466862 FITM1A5D6W6 292 aa5.52□□□□□ -1.53
GTF3C3-209ENST00000466862 ITGAEP38570 1179 aa5.52□□□□□ -1.53
GTF3C3-209ENST00000466862 NMIQ13287 307 aaPredicted RBP5.52□□□□□ -1.53
GTF3C3-209ENST00000466862 SNW1Q13573 536 aaKnown RBP5.52□□□□□ -1.53
GTF3C3-209ENST00000466862 IRF2BP1Q8IU81 584 aa5.52□□□□□ -1.53
GTF3C3-209ENST00000466862 LRRC56Q8IYG6 542 aaPredicted RBP5.52□□□□□ -1.53
GTF3C3-209ENST00000466862 GIPC2Q8TF65 315 aa5.52□□□□□ -1.53
GTF3C3-209ENST00000466862 C19orf44Q9H6X5 657 aa5.52□□□□□ -1.53
GTF3C3-209ENST00000466862 CNNM2Q9H8M5 875 aa5.52□□□□□ -1.53
GTF3C3-209ENST00000466862 UBP1Q9NZI7 540 aa5.52□□□□□ -1.53
GTF3C3-209ENST00000466862 TMEM82A0PJX8 343 aa5.51□□□□□ -1.53
GTF3C3-209ENST00000466862 RNF4P78317 190 aa5.51□□□□□ -1.53
GTF3C3-209ENST00000466862 CLCQ05315 142 aa5.51□□□□□ -1.53
GTF3C3-209ENST00000466862 BBS9Q3SYG4 887 aa5.51□□□□□ -1.53
GTF3C3-209ENST00000466862 NBPF12Q5TAG4 269 aaPredicted RBP5.51□□□□□ -1.53
GTF3C3-209ENST00000466862 TMC3Q7Z5M5 1100 aa5.51□□□□□ -1.53
GTF3C3-209ENST00000466862 ANKS4BQ8N8V4 417 aa5.51□□□□□ -1.53
GTF3C3-209ENST00000466862 ZNF296Q8WUU4 475 aaPredicted RBP5.51□□□□□ -1.53
GTF3C3-209ENST00000466862 TOX2Q96NM4 488 aa5.51□□□□□ -1.53
GTF3C3-209ENST00000466862 DCP1AQ9NPI6 582 aaPredicted RBP5.51□□□□□ -1.53
GTF3C3-209ENST00000466862 YBX2Q9Y2T7 364 aaKnown RBP5.51□□□□□ -1.53
GTF3C3-209ENST00000466862 MYOCOSA0A1B0GUC4 107 aa5.5□□□□□ -1.53
GTF3C3-209ENST00000466862 RAG1P15918 1043 aa5.5□□□□□ -1.53
GTF3C3-209ENST00000466862 CEBPAP49715 358 aaPredicted RBP5.5□□□□□ -1.53
GTF3C3-209ENST00000466862 NBPF9Q3BBW0 867 aa5.5□□□□□ -1.53
GTF3C3-209ENST00000466862 RNF111Q6ZNA4 994 aa5.5□□□□□ -1.53
GTF3C3-209ENST00000466862 HS2ST1Q7LGA3 356 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms