RNA–Protein interactions for RNA: ENST00000466588.5

GAPDH-207, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,363 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-207ENST00000466588 PAGR1Q9BTK6 254 aa13.24□□□□□ -0.29
GAPDH-207ENST00000466588 TRIM34Q9BYJ4 488 aa13.24□□□□□ -0.29
GAPDH-207ENST00000466588 UBE2OQ9C0C9 1292 aaKnown RBP13.24□□□□□ -0.29
GAPDH-207ENST00000466588 STXBP5LQ9Y2K9 1186 aa13.24□□□□□ -0.29
GAPDH-207ENST00000466588 MYO5AQ9Y4I1 1855 aaKnown RBP13.24□□□□□ -0.29
GAPDH-207ENST00000466588 CDK5RAP2Q96SN8 1893 aa13.24□□□□□ -0.29
GAPDH-207ENST00000466588 HLA-DOAP06340 250 aa13.23□□□□□ -0.29
GAPDH-207ENST00000466588 ZFYP08048 801 aaPredicted RBP13.23□□□□□ -0.29
GAPDH-207ENST00000466588 CHMLP26374 656 aa13.23□□□□□ -0.29
GAPDH-207ENST00000466588 LRRC26Q2I0M4 334 aa13.23□□□□□ -0.29
GAPDH-207ENST00000466588 USP17L2Q6R6M4 530 aa13.23□□□□□ -0.29
GAPDH-207ENST00000466588 CWC27Q6UX04 472 aaKnown RBP13.23□□□□□ -0.29
GAPDH-207ENST00000466588 C12orf42Q96LP6 360 aa13.23□□□□□ -0.29
GAPDH-207ENST00000466588 ANTXR1Q9H6X2 564 aa13.23□□□□□ -0.29
GAPDH-207ENST00000466588 MTMR10Q9NXD2 777 aa13.23□□□□□ -0.29
GAPDH-207ENST00000466588 SAP30BPQ9UHR5 308 aaKnown RBP13.23□□□□□ -0.29
GAPDH-207ENST00000466588 RNF113AO15541 343 aaKnown RBP13.22□□□□□ -0.29
GAPDH-207ENST00000466588 CNMDO75829 334 aa13.22□□□□□ -0.29
GAPDH-207ENST00000466588 MAP2K5Q13163 448 aa13.22□□□□□ -0.29
GAPDH-207ENST00000466588 TATDN1Q6P1N9 297 aa13.22□□□□□ -0.29
GAPDH-207ENST00000466588 KIAA1211Q6ZU35 1233 aa13.22□□□□□ -0.29
GAPDH-207ENST00000466588 CCAR1Q8IX12 1150 aaKnown RBP13.22□□□□□ -0.29
GAPDH-207ENST00000466588 PIH1D3Q9NQM4 214 aaKnown RBP13.22□□□□□ -0.29
GAPDH-207ENST00000466588 RABGAP1Q9Y3P9 1069 aa13.22□□□□□ -0.29
GAPDH-207ENST00000466588 SPTBN5Q9NRC6 3674 aaKnown RBP13.22□□□□□ -0.29
GAPDH-207ENST00000466588 REC8O95072 547 aa13.21□□□□□ -0.29
GAPDH-207ENST00000466588 GH2P01242 217 aa13.21□□□□□ -0.29
GAPDH-207ENST00000466588 MFAP1P55081 439 aaKnown RBP13.21□□□□□ -0.29
GAPDH-207ENST00000466588 DYNLL1P63167 89 aaKnown RBP13.21□□□□□ -0.29
GAPDH-207ENST00000466588 RAD50Q92878 1312 aa13.21□□□□□ -0.3
GAPDH-207ENST00000466588 USP17L15C9J2P7 530 aa13.2□□□□□ -0.3
GAPDH-207ENST00000466588 USP17L13C9JLJ4 530 aa13.2□□□□□ -0.3
GAPDH-207ENST00000466588 USP17L11C9JVI0 530 aa13.2□□□□□ -0.3
GAPDH-207ENST00000466588 USP17L18D6R9N7 530 aa13.2□□□□□ -0.3
GAPDH-207ENST00000466588 USP17L22D6RA61 530 aa13.2□□□□□ -0.3
GAPDH-207ENST00000466588 USP17L17D6RBQ6 530 aa13.2□□□□□ -0.3
GAPDH-207ENST00000466588 USP17L19D6RCP7 530 aa13.2□□□□□ -0.3
GAPDH-207ENST00000466588 USP17L20D6RJB6 530 aa13.2□□□□□ -0.3
GAPDH-207ENST00000466588 CCNA1P78396 465 aa13.2□□□□□ -0.3
GAPDH-207ENST00000466588 USP17L24Q0WX57 530 aa13.2□□□□□ -0.3
GAPDH-207ENST00000466588 NMIQ13287 307 aaPredicted RBP13.2□□□□□ -0.3
GAPDH-207ENST00000466588 SLC9C2Q5TAH2 1124 aa13.2□□□□□ -0.3
GAPDH-207ENST00000466588 LBX2Q6XYB7 198 aa13.2□□□□□ -0.3
GAPDH-207ENST00000466588 FEZ1Q99689 392 aa13.2□□□□□ -0.3
GAPDH-207ENST00000466588 ESYT1Q9BSJ8 1104 aa13.2□□□□□ -0.3
GAPDH-207ENST00000466588 EHD4Q9H223 541 aa13.2□□□□□ -0.3
GAPDH-207ENST00000466588 CWC22Q9HCG8 908 aaKnown RBP13.2□□□□□ -0.3
GAPDH-207ENST00000466588 HELLSQ9NRZ9 838 aa13.2□□□□□ -0.3
GAPDH-207ENST00000466588 FLRT1Q9NZU1 646 aa13.2□□□□□ -0.3
GAPDH-207ENST00000466588 EYSQ5T1H1 3165 aa13.2□□□□□ -0.3
GAPDH-207ENST00000466588 FRMPD3Q5JV73 1810 aa13.2□□□□□ -0.3
GAPDH-207ENST00000466588 VCANP13611 3396 aa13.2□□□□□ -0.3
GAPDH-207ENST00000466588 HOXC6P09630 235 aa13.2□□□□□ -0.3
GAPDH-207ENST00000466588 CYP7A1P22680 504 aa13.2□□□□□ -0.3
GAPDH-207ENST00000466588 MDM2Q00987 491 aaPredicted RBP13.2□□□□□ -0.3
GAPDH-207ENST00000466588 ZYXQ15942 572 aaKnown RBP13.2□□□□□ -0.3
GAPDH-207ENST00000466588 MCMDC2Q4G0Z9 681 aa13.2□□□□□ -0.3
GAPDH-207ENST00000466588 TMED8Q6PL24 325 aaPredicted RBP13.2□□□□□ -0.3
GAPDH-207ENST00000466588 CERS3Q8IU89 383 aa13.2□□□□□ -0.3
GAPDH-207ENST00000466588 MAGEB6Q8N7X4 407 aa13.2□□□□□ -0.3
GAPDH-207ENST00000466588 KIAA1683Q9H0B3 1180 aa13.2□□□□□ -0.3
GAPDH-207ENST00000466588 SERPINB13Q9UIV8 391 aa13.2□□□□□ -0.3
GAPDH-207ENST00000466588 SLC15A5A6NIM6 579 aa13.19□□□□□ -0.3
GAPDH-207ENST00000466588 VCAM1P19320 739 aa13.19□□□□□ -0.3
GAPDH-207ENST00000466588 PTPREP23469 700 aa13.19□□□□□ -0.3
GAPDH-207ENST00000466588 USP14P54578 494 aa13.19□□□□□ -0.3
GAPDH-207ENST00000466588 GRB14Q14449 540 aa13.19□□□□□ -0.3
GAPDH-207ENST00000466588 UBE3CQ15386 1083 aa13.19□□□□□ -0.3
GAPDH-207ENST00000466588 MFSD14CQ5VZR4 134 aa13.19□□□□□ -0.3
GAPDH-207ENST00000466588 CATSPERGQ6ZRH7 1159 aa13.19□□□□□ -0.3
GAPDH-207ENST00000466588 MIGA1Q8NAN2 632 aa13.19□□□□□ -0.3
GAPDH-207ENST00000466588 ANO2Q9NQ90 1003 aa13.19□□□□□ -0.3
GAPDH-207ENST00000466588 DDX20Q9UHI6 824 aaKnown RBP13.19□□□□□ -0.3
GAPDH-207ENST00000466588 ZNF532Q9HCE3 1301 aa13.18□□□□□ -0.3
GAPDH-207ENST00000466588 SGSM2O43147 1006 aa13.18□□□□□ -0.3
GAPDH-207ENST00000466588 MSCO60682 206 aa13.18□□□□□ -0.3
GAPDH-207ENST00000466588 IGHA2P01877 340 aa13.18□□□□□ -0.3
GAPDH-207ENST00000466588 PDE6AP16499 860 aa13.18□□□□□ -0.3
GAPDH-207ENST00000466588 MCCP23508 829 aa13.18□□□□□ -0.3
GAPDH-207ENST00000466588 ADD2P35612 726 aa13.18□□□□□ -0.3
GAPDH-207ENST00000466588 USP5P45974 858 aa13.18□□□□□ -0.3
GAPDH-207ENST00000466588 ZMYM1Q5SVZ6 1142 aa13.18□□□□□ -0.3
GAPDH-207ENST00000466588 FAM109BQ6ICB4 259 aaPredicted RBP13.18□□□□□ -0.3
GAPDH-207ENST00000466588 ACER1Q8TDN7 264 aa13.18□□□□□ -0.3
GAPDH-207ENST00000466588 APPBP2Q92624 585 aa13.18□□□□□ -0.3
GAPDH-207ENST00000466588 FAM227BQ96M60 508 aa13.18□□□□□ -0.3
GAPDH-207ENST00000466588 BTBD7Q9P203 1132 aa13.18□□□□□ -0.3
GAPDH-207ENST00000466588 ZNF236Q9UL36 1845 aa13.17□□□□□ -0.3
GAPDH-207ENST00000466588 A0A0D9SFI3 127 aa13.17□□□□□ -0.3
GAPDH-207ENST00000466588 SPDYE16A6NNV3 312 aaPredicted RBP13.17□□□□□ -0.3
GAPDH-207ENST00000466588 POTEB2H3BUK9 544 aa13.17□□□□□ -0.3
GAPDH-207ENST00000466588 DNM1LO00429 736 aa13.17□□□□□ -0.3
GAPDH-207ENST00000466588 SHMT1P34896 483 aa13.17□□□□□ -0.3
GAPDH-207ENST00000466588 RAB3GAP1Q15042 981 aa13.17□□□□□ -0.3
GAPDH-207ENST00000466588 ABCB5Q2M3G0 1257 aa13.17□□□□□ -0.3
GAPDH-207ENST00000466588 CERKLQ49MI3 558 aaPredicted RBP13.17□□□□□ -0.3
GAPDH-207ENST00000466588 WDR78Q5VTH9 848 aa13.17□□□□□ -0.3
GAPDH-207ENST00000466588 LPAR1Q92633 364 aa13.17□□□□□ -0.3
GAPDH-207ENST00000466588 GUCD1Q96NT3 240 aa13.17□□□□□ -0.3
GAPDH-207ENST00000466588 SENP6Q9GZR1 1112 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms