RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 PARK7Q99497 189 aaKnown RBP8.36□□□□□ -1.07
CLDN4-204ENST00000466411 CCDC8Q9H0W5 538 aaPredicted RBP8.36□□□□□ -1.07
CLDN4-204ENST00000466411 ZNF576Q9H609 170 aa8.36□□□□□ -1.07
CLDN4-204ENST00000466411 TDRD3Q9H7E2 651 aaKnown RBP8.36□□□□□ -1.07
CLDN4-204ENST00000466411 CXXC1Q9P0U4 656 aaPredicted RBP8.36□□□□□ -1.07
CLDN4-204ENST00000466411 HMG20BQ9P0W2 317 aa8.36□□□□□ -1.07
CLDN4-204ENST00000466411 LRP2BPQ9P2M1 347 aa8.36□□□□□ -1.07
CLDN4-204ENST00000466411 RLFQ13129 1914 aa8.36□□□□□ -1.07
CLDN4-204ENST00000466411 DCHS1Q96JQ0 3298 aa8.36□□□□□ -1.07
CLDN4-204ENST00000466411 ZNF318Q5VUA4 2279 aa8.36□□□□□ -1.07
CLDN4-204ENST00000466411 FAM86C2PA6NEL3 165 aa8.35□□□□□ -1.07
CLDN4-204ENST00000466411 F8W031 263 aaPredicted RBP8.35□□□□□ -1.07
CLDN4-204ENST00000466411 SMIM22K7EJ46 135 aa8.35□□□□□ -1.07
CLDN4-204ENST00000466411 RBM5P52756 815 aaKnown RBP eCLIP8.35□□□□□ -1.07
CLDN4-204ENST00000466411 IRX6P78412 446 aaPredicted RBP8.35□□□□□ -1.07
CLDN4-204ENST00000466411 FOXK2Q01167 660 aa8.35□□□□□ -1.07
CLDN4-204ENST00000466411 PPM1EQ8WY54 764 aa8.35□□□□□ -1.07
CLDN4-204ENST00000466411 FAM163AQ96GL9 167 aaPredicted RBP8.35□□□□□ -1.07
CLDN4-204ENST00000466411 ZDHHC15Q96MV8 337 aa8.35□□□□□ -1.07
CLDN4-204ENST00000466411 WRNIP1Q96S55 665 aa8.35□□□□□ -1.07
CLDN4-204ENST00000466411 HAUS7Q99871 368 aa8.35□□□□□ -1.07
CLDN4-204ENST00000466411 OSBPL3Q9H4L5 887 aa8.35□□□□□ -1.07
CLDN4-204ENST00000466411 SCUBE2Q9NQ36 999 aa8.35□□□□□ -1.07
CLDN4-204ENST00000466411 PAG1Q9NWQ8 432 aa8.35□□□□□ -1.07
CLDN4-204ENST00000466411 ABCF2Q9UG63 623 aa8.35□□□□□ -1.07
CLDN4-204ENST00000466411 FOCADQ5VW36 1801 aa8.35□□□□□ -1.07
CLDN4-204ENST00000466411 SPTBN4Q9H254 2564 aa8.35□□□□□ -1.07
CLDN4-204ENST00000466411 PTPRFP10586 1907 aa8.35□□□□□ -1.07
CLDN4-204ENST00000466411 FRMPD3Q5JV73 1810 aa8.34□□□□□ -1.07
CLDN4-204ENST00000466411 C5orf42Q9H799 3197 aa8.34□□□□□ -1.07
CLDN4-204ENST00000466411 TCP10L2B9ZVM9 353 aa8.34□□□□□ -1.07
CLDN4-204ENST00000466411 PI4K2BG5E9Z4 385 aa8.34□□□□□ -1.07
CLDN4-204ENST00000466411 HIP1O00291 1037 aa8.34□□□□□ -1.07
CLDN4-204ENST00000466411 DNAJB2P25686 324 aa8.34□□□□□ -1.07
CLDN4-204ENST00000466411 INPP5BP32019 993 aa8.34□□□□□ -1.07
CLDN4-204ENST00000466411 EPHB4P54760 987 aa8.34□□□□□ -1.07
CLDN4-204ENST00000466411 TFF2Q03403 129 aa8.34□□□□□ -1.07
CLDN4-204ENST00000466411 NAA16Q6N069 864 aaPredicted RBP8.34□□□□□ -1.07
CLDN4-204ENST00000466411 TRIB2Q92519 343 aa8.34□□□□□ -1.07
CLDN4-204ENST00000466411 TLR7Q9NYK1 1049 aaKnown RBP8.34□□□□□ -1.07
CLDN4-204ENST00000466411 RAI14Q9P0K7 980 aa8.34□□□□□ -1.07
CLDN4-204ENST00000466411 ZNF112Q9UJU3 913 aa8.34□□□□□ -1.07
CLDN4-204ENST00000466411 IQSEC3Q9UPP2 1182 aaPredicted RBP8.34□□□□□ -1.07
CLDN4-204ENST00000466411 RPAP1Q9BWH6 1393 aaPredicted RBP8.34□□□□□ -1.07
CLDN4-204ENST00000466411 MROH7-TTC4A0A0A0MT08 1334 aa8.33□□□□□ -1.08
CLDN4-204ENST00000466411 GAKO14976 1311 aa8.33□□□□□ -1.08
CLDN4-204ENST00000466411 EIF5BO60841 1220 aaKnown RBP8.33□□□□□ -1.08
CLDN4-204ENST00000466411 CRKP46108 304 aa8.33□□□□□ -1.08
CLDN4-204ENST00000466411 KCNQ1P51787 676 aa8.33□□□□□ -1.08
CLDN4-204ENST00000466411 PDE1AP54750 535 aa8.33□□□□□ -1.08
CLDN4-204ENST00000466411 MFAP1P55081 439 aaKnown RBP8.33□□□□□ -1.08
CLDN4-204ENST00000466411 FAM83AQ86UY5 434 aa8.33□□□□□ -1.08
CLDN4-204ENST00000466411 BADQ92934 168 aa8.33□□□□□ -1.08
CLDN4-204ENST00000466411 COA7Q96BR5 231 aa8.33□□□□□ -1.08
CLDN4-204ENST00000466411 NSUN4Q96CB9 384 aaKnown RBP8.33□□□□□ -1.08
CLDN4-204ENST00000466411 EVI5LQ96CN4 794 aa8.33□□□□□ -1.08
CLDN4-204ENST00000466411 DDRGK1Q96HY6 314 aa8.33□□□□□ -1.08
CLDN4-204ENST00000466411 DNAJC2Q99543 621 aaKnown RBP8.33□□□□□ -1.08
CLDN4-204ENST00000466411 LNPKQ9C0E8 428 aa8.33□□□□□ -1.08
CLDN4-204ENST00000466411 SLC45A1Q9Y2W3 748 aa8.33□□□□□ -1.08
CLDN4-204ENST00000466411 SALL3Q9BXA9 1300 aa8.32□□□□□ -1.08
CLDN4-204ENST00000466411 PLXNA1Q9UIW2 1896 aa8.32□□□□□ -1.08
CLDN4-204ENST00000466411 TRIM43BA6NCK2 446 aa8.32□□□□□ -1.08
CLDN4-204ENST00000466411 GOLIM4O00461 696 aa8.32□□□□□ -1.08
CLDN4-204ENST00000466411 CXCL11O14625 94 aa8.32□□□□□ -1.08
CLDN4-204ENST00000466411 TLL1O43897 1013 aa8.32□□□□□ -1.08
CLDN4-204ENST00000466411 SMARCA5O60264 1052 aaPredicted RBP8.32□□□□□ -1.08
CLDN4-204ENST00000466411 IDH1O75874 414 aaKnown RBP8.32□□□□□ -1.08
CLDN4-204ENST00000466411 IGHDP01880 384 aa8.32□□□□□ -1.08
CLDN4-204ENST00000466411 CYP2E1P05181 493 aaPredicted RBP8.32□□□□□ -1.08
CLDN4-204ENST00000466411 ITGB8P26012 769 aa8.32□□□□□ -1.08
CLDN4-204ENST00000466411 PRDX5P30044 214 aa8.32□□□□□ -1.08
CLDN4-204ENST00000466411 ZAP70P43403 619 aa8.32□□□□□ -1.08
CLDN4-204ENST00000466411 MECOMQ03112 1051 aa8.32□□□□□ -1.08
CLDN4-204ENST00000466411 UBE3CQ15386 1083 aa8.32□□□□□ -1.08
CLDN4-204ENST00000466411 CCDC85BQ15834 202 aaPredicted RBP8.32□□□□□ -1.08
CLDN4-204ENST00000466411 B4GALNT3Q6L9W6 998 aa8.32□□□□□ -1.08
CLDN4-204ENST00000466411 AMOTL1Q8IY63 956 aa8.32□□□□□ -1.08
CLDN4-204ENST00000466411 KBTBD3Q8NAB2 608 aa8.32□□□□□ -1.08
CLDN4-204ENST00000466411 TRIM43Q96BQ3 446 aaPredicted RBP8.32□□□□□ -1.08
CLDN4-204ENST00000466411 FBXL18Q96ME1 805 aa8.32□□□□□ -1.08
CLDN4-204ENST00000466411 SENP6Q9GZR1 1112 aaPredicted RBP8.32□□□□□ -1.08
CLDN4-204ENST00000466411 CD320Q9NPF0 282 aa8.32□□□□□ -1.08
CLDN4-204ENST00000466411 DAGLAQ9Y4D2 1042 aa8.32□□□□□ -1.08
CLDN4-204ENST00000466411 MYO5AQ9Y4I1 1855 aaKnown RBP8.32□□□□□ -1.08
CLDN4-204ENST00000466411 PRRC2BQ5JSZ5 2229 aaKnown RBP8.31□□□□□ -1.08
CLDN4-204ENST00000466411 GPR75-ASB3A0A0A6YYF3 556 aa8.31□□□□□ -1.08
CLDN4-204ENST00000466411 A0A0G2JLL6 359 aaPredicted RBP8.31□□□□□ -1.08
CLDN4-204ENST00000466411 PRR33A8MZF0 331 aa8.31□□□□□ -1.08
CLDN4-204ENST00000466411 GNAT2P19087 354 aa8.31□□□□□ -1.08
CLDN4-204ENST00000466411 RTP1P59025 263 aa8.31□□□□□ -1.08
CLDN4-204ENST00000466411 PPP4CP60510 307 aa8.31□□□□□ -1.08
CLDN4-204ENST00000466411 CACNB2Q08289 660 aaPredicted RBP8.31□□□□□ -1.08
CLDN4-204ENST00000466411 SLC9C2Q5TAH2 1124 aa8.31□□□□□ -1.08
CLDN4-204ENST00000466411 CASC1Q6TDU7 716 aa8.31□□□□□ -1.08
CLDN4-204ENST00000466411 MAMSTRQ6ZN01 415 aa8.31□□□□□ -1.08
CLDN4-204ENST00000466411 PRRT2Q7Z6L0 340 aaPredicted RBP8.31□□□□□ -1.08
CLDN4-204ENST00000466411 PI4K2BQ8TCG2 481 aa8.31□□□□□ -1.08
CLDN4-204ENST00000466411 PHOX2BQ99453 314 aa8.31□□□□□ -1.08
CLDN4-204ENST00000466411 BOLA2Q9H3K6 86 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms