RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 MNS1Q8NEH6 495 aa22.03■■□□□ 1.12
LIMS2-212ENST00000466410 UBXN4Q92575 508 aa22.03■■□□□ 1.12
LIMS2-212ENST00000466410 STAMQ92783 540 aa22.03■■□□□ 1.12
LIMS2-212ENST00000466410 NSUN4Q96CB9 384 aaKnown RBP22.03■■□□□ 1.12
LIMS2-212ENST00000466410 SYNRGQ9UMZ2 1314 aa22.03■■□□□ 1.12
LIMS2-212ENST00000466410 MYH13Q9UKX3 1938 aa22.03■■□□□ 1.12
LIMS2-212ENST00000466410 BMP15O95972 392 aa22.02■■□□□ 1.12
LIMS2-212ENST00000466410 MECOMQ03112 1051 aa22.02■■□□□ 1.12
LIMS2-212ENST00000466410 FAM47AQ5JRC9 791 aa22.02■■□□□ 1.12
LIMS2-212ENST00000466410 SPATA31A5Q5VU36 1347 aa22.02■■□□□ 1.12
LIMS2-212ENST00000466410 SPATA31A7Q8IWB4 1347 aa22.02■■□□□ 1.12
LIMS2-212ENST00000466410 TADA3O75528 432 aa22.02■■□□□ 1.12
LIMS2-212ENST00000466410 PCP11498 1178 aaKnown RBP22.02■■□□□ 1.12
LIMS2-212ENST00000466410 VEGFAP15692 232 aaPredicted RBP22.02■■□□□ 1.12
LIMS2-212ENST00000466410 MTF1Q14872 753 aa22.02■■□□□ 1.12
LIMS2-212ENST00000466410 SMIM5Q71RC9 77 aa22.02■■□□□ 1.12
LIMS2-212ENST00000466410 SRRTQ9BXP5 876 aaKnown RBP22.02■■□□□ 1.12
LIMS2-212ENST00000466410 SCN7AQ01118 1682 aa22.01■■□□□ 1.11
LIMS2-212ENST00000466410 FBXO33Q7Z6M2 555 aa22.01■■□□□ 1.11
LIMS2-212ENST00000466410 GSDMAQ96QA5 445 aa22.01■■□□□ 1.11
LIMS2-212ENST00000466410 DLEC1Q9Y238 1755 aa22.01■■□□□ 1.11
LIMS2-212ENST00000466410 GOLGA6L9A6NEM1 432 aa22.01■■□□□ 1.11
LIMS2-212ENST00000466410 PPP1R3GB7ZBB8 358 aa22.01■■□□□ 1.11
LIMS2-212ENST00000466410 ADAMTS3O15072 1205 aa22.01■■□□□ 1.11
LIMS2-212ENST00000466410 KCNQ4P56696 695 aa22.01■■□□□ 1.11
LIMS2-212ENST00000466410 ATP2C1P98194 919 aaPredicted RBP22.01■■□□□ 1.11
LIMS2-212ENST00000466410 GABPB1Q06547 395 aaPredicted RBP22.01■■□□□ 1.11
LIMS2-212ENST00000466410 DCP1AQ9NPI6 582 aaPredicted RBP22.01■■□□□ 1.11
LIMS2-212ENST00000466410 THRAP3Q9Y2W1 955 aaKnown RBP22.01■■□□□ 1.11
LIMS2-212ENST00000466410 CYP2D6P10635 497 aa22■■□□□ 1.11
LIMS2-212ENST00000466410 CASQ1P31415 396 aa22■■□□□ 1.11
LIMS2-212ENST00000466410 CT47A1Q5JQC4 288 aaPredicted RBP22■■□□□ 1.11
LIMS2-212ENST00000466410 CTCFLQ8NI51 663 aaPredicted RBP22■■□□□ 1.11
LIMS2-212ENST00000466410 AKR1B15C9JRZ8 316 aaPredicted RBP22■■□□□ 1.11
LIMS2-212ENST00000466410 CDKAL1Q5VV42 579 aa22■■□□□ 1.11
LIMS2-212ENST00000466410 ADD3Q9UEY8 706 aaKnown RBP22■■□□□ 1.11
LIMS2-212ENST00000466410 SOWAHDA6NJG2 315 aa21.99■■□□□ 1.11
LIMS2-212ENST00000466410 ORC4O43929 436 aa21.99■■□□□ 1.11
LIMS2-212ENST00000466410 GTF2E1P29083 439 aaPredicted RBP21.99■■□□□ 1.11
LIMS2-212ENST00000466410 PIK3AP1Q6ZUJ8 805 aa21.99■■□□□ 1.11
LIMS2-212ENST00000466410 TFCP2L1Q9NZI6 479 aa21.99■■□□□ 1.11
LIMS2-212ENST00000466410 CASZ1Q86V15 1759 aa21.99■■□□□ 1.11
LIMS2-212ENST00000466410 COBLO75128 1261 aa21.99■■□□□ 1.11
LIMS2-212ENST00000466410 PRDX5P30044 214 aa21.99■■□□□ 1.11
LIMS2-212ENST00000466410 RBL2Q08999 1139 aa21.99■■□□□ 1.11
LIMS2-212ENST00000466410 KARSQ15046 597 aaKnown RBP21.99■■□□□ 1.11
LIMS2-212ENST00000466410 IGSF22Q8N9C0 903 aa21.99■■□□□ 1.11
LIMS2-212ENST00000466410 LINC00116Q8NCU8 138 aa21.99■■□□□ 1.11
LIMS2-212ENST00000466410 CPLX3Q8WVH0 158 aa21.99■■□□□ 1.11
LIMS2-212ENST00000466410 BLZF1Q9H2G9 400 aa21.99■■□□□ 1.11
LIMS2-212ENST00000466410 MRPL44Q9H9J2 332 aaKnown RBP21.99■■□□□ 1.11
LIMS2-212ENST00000466410 XDHP47989 1333 aa21.99■■□□□ 1.11
LIMS2-212ENST00000466410 SCG2P13521 617 aa21.98■■□□□ 1.11
LIMS2-212ENST00000466410 PBX1P40424 430 aa21.98■■□□□ 1.11
LIMS2-212ENST00000466410 NLRP5P59047 1200 aa21.98■■□□□ 1.11
LIMS2-212ENST00000466410 PANX2Q96RD6 677 aa21.98■■□□□ 1.11
LIMS2-212ENST00000466410 EFCAB8A8MWE9 144 aa21.98■■□□□ 1.11
LIMS2-212ENST00000466410 MAP3K9P80192 1104 aa21.98■■□□□ 1.11
LIMS2-212ENST00000466410 E2F4Q16254 413 aa21.98■■□□□ 1.11
LIMS2-212ENST00000466410 IL17AQ16552 155 aa21.98■■□□□ 1.11
LIMS2-212ENST00000466410 KIFC2Q96AC6 838 aa21.98■■□□□ 1.11
LIMS2-212ENST00000466410 CRNKL1Q9BZJ0 848 aaKnown RBP21.98■■□□□ 1.11
LIMS2-212ENST00000466410 ST7Q9NRC1 585 aa21.98■■□□□ 1.11
LIMS2-212ENST00000466410 FHOD1Q9Y613 1164 aa21.98■■□□□ 1.11
LIMS2-212ENST00000466410 MCM7P33993 719 aa21.97■■□□□ 1.11
LIMS2-212ENST00000466410 TBC1D9BQ66K14 1250 aa21.97■■□□□ 1.11
LIMS2-212ENST00000466410 SEMA3EO15041 775 aa21.97■■□□□ 1.11
LIMS2-212ENST00000466410 BMS1Q14692 1282 aaKnown RBP21.97■■□□□ 1.11
LIMS2-212ENST00000466410 SLC4A8Q2Y0W8 1093 aa21.97■■□□□ 1.11
LIMS2-212ENST00000466410 SMARCC1Q92922 1105 aaPredicted RBP21.97■■□□□ 1.11
LIMS2-212ENST00000466410 IRX2Q9BZI1 471 aaPredicted RBP21.97■■□□□ 1.11
LIMS2-212ENST00000466410 EPC1Q9H2F5 836 aa21.97■■□□□ 1.11
LIMS2-212ENST00000466410 CTNND2Q9UQB3 1225 aa21.97■■□□□ 1.11
LIMS2-212ENST00000466410 RAD9BQ6WBX8 426 aa21.96■■□□□ 1.11
LIMS2-212ENST00000466410 PPFIBP1Q86W92 1011 aa21.96■■□□□ 1.11
LIMS2-212ENST00000466410 MTRQ99707 1265 aa21.96■■□□□ 1.11
LIMS2-212ENST00000466410 JAG2Q9Y219 1238 aa21.96■■□□□ 1.11
LIMS2-212ENST00000466410 HIBADHP31937 336 aaKnown RBP21.96■■□□□ 1.11
LIMS2-212ENST00000466410 RPS8P62241 208 aaKnown RBP21.96■■□□□ 1.11
LIMS2-212ENST00000466410 PFKFB3Q16875 520 aaPredicted RBP21.96■■□□□ 1.11
LIMS2-212ENST00000466410 IQUBQ8NA54 791 aa21.96■■□□□ 1.11
LIMS2-212ENST00000466410 MRFAP1Q9Y605 127 aa21.96■■□□□ 1.11
LIMS2-212ENST00000466410 COL5A3P25940 1745 aaPredicted RBP21.96■■□□□ 1.11
LIMS2-212ENST00000466410 KIF20AO95235 890 aa21.95■■□□□ 1.11
LIMS2-212ENST00000466410 RCSD1Q6JBY9 416 aa21.95■■□□□ 1.11
LIMS2-212ENST00000466410 ATP8A2Q9NTI2 1148 aa21.95■■□□□ 1.11
LIMS2-212ENST00000466410 A0A0U1RQJ8 604 aa21.95■■□□□ 1.1
LIMS2-212ENST00000466410 TSPY2A6NKD2 308 aa21.95■■□□□ 1.1
LIMS2-212ENST00000466410 CCDC175P0C221 793 aa21.95■■□□□ 1.1
LIMS2-212ENST00000466410 SLC10A5Q5PT55 438 aa21.95■■□□□ 1.1
LIMS2-212ENST00000466410 PDXDC2PQ6P474 469 aa21.95■■□□□ 1.1
LIMS2-212ENST00000466410 ATRIPQ8WXE1 791 aa21.95■■□□□ 1.1
LIMS2-212ENST00000466410 CTAGE1Q96RT6 745 aa21.95■■□□□ 1.1
LIMS2-212ENST00000466410 PNMA6AP0CW24 399 aaPredicted RBP21.94■■□□□ 1.1
LIMS2-212ENST00000466410 TERF2Q15554 542 aa21.94■■□□□ 1.1
LIMS2-212ENST00000466410 ZNF771Q7L3S4 317 aaPredicted RBP21.94■■□□□ 1.1
LIMS2-212ENST00000466410 CCDC24Q8N4L8 307 aa21.94■■□□□ 1.1
LIMS2-212ENST00000466410 ADGRG1Q9Y653 693 aa21.94■■□□□ 1.1
LIMS2-212ENST00000466410 ZRANB2O95218 330 aaKnown RBP eCLIP21.94■■□□□ 1.1
LIMS2-212ENST00000466410 CCT6AP40227 531 aaKnown RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms