RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 TTC22Q5TAA0 569 aa12.12□□□□□ -0.47
CD40-204ENST00000466205 LRRC47Q8N1G4 583 aaKnown RBP12.12□□□□□ -0.47
CD40-204ENST00000466205 VCPKMTQ9H867 229 aa12.12□□□□□ -0.47
CD40-204ENST00000466205 KANSL2Q9H9L4 492 aa12.12□□□□□ -0.47
CD40-204ENST00000466205 TOMM22Q9NS69 142 aa12.12□□□□□ -0.47
CD40-204ENST00000466205 RBPJLQ9UBG7 517 aa12.12□□□□□ -0.47
CD40-204ENST00000466205 TMX2Q9Y320 296 aa12.12□□□□□ -0.47
CD40-204ENST00000466205 TACC3Q9Y6A5 838 aa12.12□□□□□ -0.47
CD40-204ENST00000466205 MGAMO43451 1857 aa12.12□□□□□ -0.47
CD40-204ENST00000466205 CNMDO75829 334 aa12.11□□□□□ -0.47
CD40-204ENST00000466205 GNRH1P01148 92 aa12.11□□□□□ -0.47
CD40-204ENST00000466205 FGAP02671 866 aa12.11□□□□□ -0.47
CD40-204ENST00000466205 SLC3A2P08195 630 aaKnown RBP12.11□□□□□ -0.47
CD40-204ENST00000466205 TSPY3P0CV98 308 aa12.11□□□□□ -0.47
CD40-204ENST00000466205 TSPY8P0CW00 308 aa12.11□□□□□ -0.47
CD40-204ENST00000466205 ELNP15502 786 aa12.11□□□□□ -0.47
CD40-204ENST00000466205 ERVK-9P63128 1117 aa12.11□□□□□ -0.47
CD40-204ENST00000466205 ERVK-24P63145 666 aa12.11□□□□□ -0.47
CD40-204ENST00000466205 TFAP4Q01664 338 aa12.11□□□□□ -0.47
CD40-204ENST00000466205 PDE4BQ07343 736 aa12.11□□□□□ -0.47
CD40-204ENST00000466205 WDR78Q5VTH9 848 aa12.11□□□□□ -0.47
CD40-204ENST00000466205 CCAR1Q8IX12 1150 aaKnown RBP12.11□□□□□ -0.47
CD40-204ENST00000466205 GPRC5AQ8NFJ5 357 aa12.11□□□□□ -0.47
CD40-204ENST00000466205 COA7Q96BR5 231 aa12.11□□□□□ -0.47
CD40-204ENST00000466205 CEP95Q96GE4 821 aa12.11□□□□□ -0.47
CD40-204ENST00000466205 NUP88Q99567 741 aaPredicted RBP12.11□□□□□ -0.47
CD40-204ENST00000466205 PORCNQ9H237 461 aa12.11□□□□□ -0.47
CD40-204ENST00000466205 IL25Q9H293 177 aa12.11□□□□□ -0.47
CD40-204ENST00000466205 SH2D4AQ9H788 454 aa12.11□□□□□ -0.47
CD40-204ENST00000466205 CWC22Q9HCG8 908 aaKnown RBP12.11□□□□□ -0.47
CD40-204ENST00000466205 BTBD7Q9P203 1132 aa12.11□□□□□ -0.47
CD40-204ENST00000466205 BIN2Q9UBW5 565 aaPredicted RBP12.11□□□□□ -0.47
CD40-204ENST00000466205 CLIP2Q9UDT6 1046 aa12.11□□□□□ -0.47
CD40-204ENST00000466205 TSPY2A6NKD2 308 aa12.1□□□□□ -0.47
CD40-204ENST00000466205 SPDYE16A6NNV3 312 aaPredicted RBP12.1□□□□□ -0.47
CD40-204ENST00000466205 NMT2O60551 498 aa12.1□□□□□ -0.47
CD40-204ENST00000466205 FLOT1O75955 427 aa12.1□□□□□ -0.47
CD40-204ENST00000466205 CYP2B6P20813 491 aa12.1□□□□□ -0.47
CD40-204ENST00000466205 MTFR1Q15390 333 aa12.1□□□□□ -0.47
CD40-204ENST00000466205 FAM83BQ5T0W9 1011 aa12.1□□□□□ -0.47
CD40-204ENST00000466205 NBPF11Q86T75 865 aa12.1□□□□□ -0.47
CD40-204ENST00000466205 ARMC5Q96C12 935 aa12.1□□□□□ -0.47
CD40-204ENST00000466205 ATG4CQ96DT6 458 aa12.1□□□□□ -0.47
CD40-204ENST00000466205 ZNF333Q96JL9 665 aa12.1□□□□□ -0.47
CD40-204ENST00000466205 ZNF287Q9HBT7 754 aa12.1□□□□□ -0.47
CD40-204ENST00000466205 FBXO28Q9NVF7 368 aa12.1□□□□□ -0.47
CD40-204ENST00000466205 MORF4L1Q9UBU8 362 aa12.1□□□□□ -0.47
CD40-204ENST00000466205 ISY1Q9ULR0 285 aaKnown RBP12.1□□□□□ -0.47
CD40-204ENST00000466205 MTMR7Q9Y216 660 aa12.1□□□□□ -0.47
CD40-204ENST00000466205 ADCY3O60266 1144 aa12.09□□□□□ -0.47
CD40-204ENST00000466205 RANBP6O60518 1105 aaKnown RBP12.09□□□□□ -0.47
CD40-204ENST00000466205 GRK4P32298 578 aa12.09□□□□□ -0.47
CD40-204ENST00000466205 PRMT2P55345 433 aa12.09□□□□□ -0.47
CD40-204ENST00000466205 PLS1Q14651 629 aa12.09□□□□□ -0.47
CD40-204ENST00000466205 GOPCQ9HD26 462 aa12.09□□□□□ -0.47
CD40-204ENST00000466205 GREB1LQ9C091 1923 aaPredicted RBP12.09□□□□□ -0.47
CD40-204ENST00000466205 IGKV6D-41A0A0C4DH26 115 aa12.08□□□□□ -0.48
CD40-204ENST00000466205 F5H6K3 240 aa12.08□□□□□ -0.48
CD40-204ENST00000466205 HIP1O00291 1037 aa12.08□□□□□ -0.48
CD40-204ENST00000466205 WDR46O15213 610 aaKnown RBP12.08□□□□□ -0.48
CD40-204ENST00000466205 NDUFB10O96000 172 aa12.08□□□□□ -0.48
CD40-204ENST00000466205 EN2P19622 333 aaPredicted RBP12.08□□□□□ -0.48
CD40-204ENST00000466205 MLLT1Q03111 559 aaPredicted RBP12.08□□□□□ -0.48
CD40-204ENST00000466205 KLRC3Q07444 240 aa12.08□□□□□ -0.48
CD40-204ENST00000466205 COG2Q14746 738 aa12.08□□□□□ -0.48
CD40-204ENST00000466205 RASGRP2Q7LDG7 609 aa12.08□□□□□ -0.48
CD40-204ENST00000466205 GPR142Q7Z601 462 aa12.08□□□□□ -0.48
CD40-204ENST00000466205 TBC1D10CQ8IV04 446 aa12.08□□□□□ -0.48
CD40-204ENST00000466205 NEDD1Q8NHV4 660 aa12.08□□□□□ -0.48
CD40-204ENST00000466205 NKX2-3Q8TAU0 364 aa12.08□□□□□ -0.48
CD40-204ENST00000466205 GTF3C2Q8WUA4 911 aaPredicted RBP12.08□□□□□ -0.48
CD40-204ENST00000466205 LPAR1Q92633 364 aa12.08□□□□□ -0.48
CD40-204ENST00000466205 TMEM106CQ9BVX2 250 aa12.08□□□□□ -0.48
CD40-204ENST00000466205 MTMR4Q9NYA4 1195 aa12.08□□□□□ -0.48
CD40-204ENST00000466205 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.08□□□□□ -0.48
CD40-204ENST00000466205 TTLL1O95922 423 aa12.07□□□□□ -0.48
CD40-204ENST00000466205 INHAP05111 366 aa12.07□□□□□ -0.48
CD40-204ENST00000466205 DSG3P32926 999 aa12.07□□□□□ -0.48
CD40-204ENST00000466205 SLC4A3P48751 1232 aa12.07□□□□□ -0.48
CD40-204ENST00000466205 MFAP1P55081 439 aaKnown RBP12.07□□□□□ -0.48
CD40-204ENST00000466205 TRIM32Q13049 653 aa12.07□□□□□ -0.48
CD40-204ENST00000466205 ALX1Q15699 326 aa12.07□□□□□ -0.48
CD40-204ENST00000466205 PLEKHH3Q7Z736 793 aa12.07□□□□□ -0.48
CD40-204ENST00000466205 SLAIN1Q8ND83 568 aa12.07□□□□□ -0.48
CD40-204ENST00000466205 NBPF3Q9H094 633 aa12.07□□□□□ -0.48
CD40-204ENST00000466205 NYAP2Q9P242 653 aa12.07□□□□□ -0.48
CD40-204ENST00000466205 ANAPC4Q9UJX5 808 aa12.07□□□□□ -0.48
CD40-204ENST00000466205 STX8Q9UNK0 236 aa12.07□□□□□ -0.48
CD40-204ENST00000466205 RABGAP1Q9Y3P9 1069 aa12.07□□□□□ -0.48
CD40-204ENST00000466205 ZNF213O14771 459 aa12.06□□□□□ -0.48
CD40-204ENST00000466205 CCL5P13501 91 aa12.06□□□□□ -0.48
CD40-204ENST00000466205 MAPK4P31152 587 aa12.06□□□□□ -0.48
CD40-204ENST00000466205 RGS19P49795 217 aa12.06□□□□□ -0.48
CD40-204ENST00000466205 UBXN2AP68543 259 aa12.06□□□□□ -0.48
CD40-204ENST00000466205 LBX2Q6XYB7 198 aa12.06□□□□□ -0.48
CD40-204ENST00000466205 CENPQQ7L2Z9 268 aaPredicted RBP12.06□□□□□ -0.48
CD40-204ENST00000466205 NCAPG2Q86XI2 1143 aa12.06□□□□□ -0.48
CD40-204ENST00000466205 NUDT12Q9BQG2 462 aa12.06□□□□□ -0.48
CD40-204ENST00000466205 ZKSCAN3Q9BRR0 538 aa12.06□□□□□ -0.48
CD40-204ENST00000466205 MOV10L1Q9BXT6 1211 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms