RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 LPAR1Q92633 364 aa15.33■□□□□ 0.04
COL5A1-206ENST00000465877 RPAP3Q9H6T3 665 aaPredicted RBP15.33■□□□□ 0.04
COL5A1-206ENST00000465877 VCPKMTQ9H867 229 aa15.33■□□□□ 0.04
COL5A1-206ENST00000465877 PTPN22Q9Y2R2 807 aa15.33■□□□□ 0.04
COL5A1-206ENST00000465877 IGKV6D-41A0A0C4DH26 115 aa15.32■□□□□ 0.04
COL5A1-206ENST00000465877 GNRH1P01148 92 aa15.32■□□□□ 0.04
COL5A1-206ENST00000465877 TSPY3P0CV98 308 aa15.32■□□□□ 0.04
COL5A1-206ENST00000465877 TSPY8P0CW00 308 aa15.32■□□□□ 0.04
COL5A1-206ENST00000465877 FCGRTP55899 365 aa15.32■□□□□ 0.04
COL5A1-206ENST00000465877 HAND2P61296 217 aa15.32■□□□□ 0.04
COL5A1-206ENST00000465877 KIAA1755Q5JYT7 1200 aa15.32■□□□□ 0.04
COL5A1-206ENST00000465877 GTF3C2Q8WUA4 911 aaPredicted RBP15.32■□□□□ 0.04
COL5A1-206ENST00000465877 CEP95Q96GE4 821 aa15.32■□□□□ 0.04
COL5A1-206ENST00000465877 P2RX7Q99572 595 aaKnown RBP15.32■□□□□ 0.04
COL5A1-206ENST00000465877 TANGO6Q9C0B7 1094 aa15.32■□□□□ 0.04
COL5A1-206ENST00000465877 MORF4L1Q9UBU8 362 aa15.32■□□□□ 0.04
COL5A1-206ENST00000465877 WDR46O15213 610 aaKnown RBP15.31■□□□□ 0.04
COL5A1-206ENST00000465877 FMNL1O95466 1100 aaPredicted RBP15.31■□□□□ 0.04
COL5A1-206ENST00000465877 FAM47AQ5JRC9 791 aa15.31■□□□□ 0.04
COL5A1-206ENST00000465877 CATSPERGQ6ZRH7 1159 aa15.31■□□□□ 0.04
COL5A1-206ENST00000465877 TBC1D10CQ8IV04 446 aa15.31■□□□□ 0.04
COL5A1-206ENST00000465877 SPICE1Q8N0Z3 855 aa15.31■□□□□ 0.04
COL5A1-206ENST00000465877 PAGR1Q9BTK6 254 aa15.31■□□□□ 0.04
COL5A1-206ENST00000465877 DSCC1Q9BVC3 393 aa15.31■□□□□ 0.04
COL5A1-206ENST00000465877 NBPF3Q9H094 633 aa15.31■□□□□ 0.04
COL5A1-206ENST00000465877 GOPCQ9HD26 462 aa15.31■□□□□ 0.04
COL5A1-206ENST00000465877 TACC3Q9Y6A5 838 aa15.31■□□□□ 0.04
COL5A1-206ENST00000465877 PTCH2Q9Y6C5 1203 aa15.31■□□□□ 0.04
COL5A1-206ENST00000465877 MYPNQ86TC9 1320 aa15.31■□□□□ 0.04
COL5A1-206ENST00000465877 CCDC85CA6NKD9 419 aa15.3■□□□□ 0.04
COL5A1-206ENST00000465877 SPDYE16A6NNV3 312 aaPredicted RBP15.3■□□□□ 0.04
COL5A1-206ENST00000465877 TNPO2O14787 897 aaKnown RBP15.3■□□□□ 0.04
COL5A1-206ENST00000465877 ORC4O43929 436 aa15.3■□□□□ 0.04
COL5A1-206ENST00000465877 CHMLP26374 656 aa15.3■□□□□ 0.04
COL5A1-206ENST00000465877 NEDD1Q8NHV4 660 aa15.3■□□□□ 0.04
COL5A1-206ENST00000465877 TXNRD2Q9NNW7 524 aa15.3■□□□□ 0.04
COL5A1-206ENST00000465877 NYAP2Q9P242 653 aa15.3■□□□□ 0.04
COL5A1-206ENST00000465877 SRRDQ9UH36 339 aa15.3■□□□□ 0.04
COL5A1-206ENST00000465877 PLXNA1Q9UIW2 1896 aa15.3■□□□□ 0.04
COL5A1-206ENST00000465877 FRMPD3Q5JV73 1810 aa15.29■□□□□ 0.04
COL5A1-206ENST00000465877 NEDD4P46934 1319 aa15.29■□□□□ 0.04
COL5A1-206ENST00000465877 TSPY2A6NKD2 308 aa15.29■□□□□ 0.04
COL5A1-206ENST00000465877 RAD21O60216 631 aa15.29■□□□□ 0.04
COL5A1-206ENST00000465877 RANBP6O60518 1105 aaKnown RBP15.29■□□□□ 0.04
COL5A1-206ENST00000465877 PEX10O60683 326 aa15.29■□□□□ 0.04
COL5A1-206ENST00000465877 TTLL1O95922 423 aa15.29■□□□□ 0.04
COL5A1-206ENST00000465877 FGRP09769 529 aa15.29■□□□□ 0.04
COL5A1-206ENST00000465877 PRMT2P55345 433 aa15.29■□□□□ 0.04
COL5A1-206ENST00000465877 ERVK-9P63128 1117 aa15.29■□□□□ 0.04
COL5A1-206ENST00000465877 ERVK-24P63145 666 aa15.29■□□□□ 0.04
COL5A1-206ENST00000465877 TFAP4Q01664 338 aa15.29■□□□□ 0.04
COL5A1-206ENST00000465877 PRKCZQ05513 592 aa15.29■□□□□ 0.04
COL5A1-206ENST00000465877 POTEEQ6S8J3 1075 aa15.29■□□□□ 0.04
COL5A1-206ENST00000465877 LBX2Q6XYB7 198 aa15.29■□□□□ 0.04
COL5A1-206ENST00000465877 LRRC47Q8N1G4 583 aaKnown RBP15.29■□□□□ 0.04
COL5A1-206ENST00000465877 RUFY2Q8WXA3 655 aa15.29■□□□□ 0.04
COL5A1-206ENST00000465877 INCENPQ9NQS7 918 aa15.29■□□□□ 0.04
COL5A1-206ENST00000465877 TOMM22Q9NS69 142 aa15.29■□□□□ 0.04
COL5A1-206ENST00000465877 MTMR4Q9NYA4 1195 aa15.29■□□□□ 0.04
COL5A1-206ENST00000465877 PCP11498 1178 aaKnown RBP15.28■□□□□ 0.04
COL5A1-206ENST00000465877 SLC9C1Q4G0N8 1177 aa15.28■□□□□ 0.04
COL5A1-206ENST00000465877 BMP2KLQ5H9B9 411 aa15.28■□□□□ 0.04
COL5A1-206ENST00000465877 RRP12Q5JTH9 1297 aaKnown RBP15.28■□□□□ 0.04
COL5A1-206ENST00000465877 AKNAD1Q5T1N1 836 aa15.28■□□□□ 0.04
COL5A1-206ENST00000465877 STAG1Q8WVM7 1258 aa15.28■□□□□ 0.04
COL5A1-206ENST00000465877 ZNF213O14771 459 aa15.27■□□□□ 0.04
COL5A1-206ENST00000465877 TNRC18O15417 2968 aaPredicted RBP15.27■□□□□ 0.04
COL5A1-206ENST00000465877 SGSM2O43147 1006 aa15.27■□□□□ 0.04
COL5A1-206ENST00000465877 CNMDO75829 334 aa15.27■□□□□ 0.04
COL5A1-206ENST00000465877 FLOT1O75955 427 aa15.27■□□□□ 0.04
COL5A1-206ENST00000465877 NDUFB10O96000 172 aa15.27■□□□□ 0.04
COL5A1-206ENST00000465877 HOXD10P28358 340 aa15.27■□□□□ 0.04
COL5A1-206ENST00000465877 FAM83BQ5T0W9 1011 aa15.27■□□□□ 0.04
COL5A1-206ENST00000465877 GPRC5AQ8NFJ5 357 aa15.27■□□□□ 0.04
COL5A1-206ENST00000465877 RNF41Q9H4P4 317 aaPredicted RBP15.27■□□□□ 0.04
COL5A1-206ENST00000465877 RBPJLQ9UBG7 517 aa15.27■□□□□ 0.04
COL5A1-206ENST00000465877 CLIP2Q9UDT6 1046 aa15.27■□□□□ 0.04
COL5A1-206ENST00000465877 SYNPO2Q9UMS6 1093 aa15.27■□□□□ 0.04
COL5A1-206ENST00000465877 RABGAP1Q9Y3P9 1069 aa15.27■□□□□ 0.04
COL5A1-206ENST00000465877 ZNFX1Q9P2E3 1918 aaKnown RBP15.27■□□□□ 0.03
COL5A1-206ENST00000465877 MKI67P46013 3256 aaKnown RBP15.27■□□□□ 0.03
COL5A1-206ENST00000465877 NMT2O60551 498 aa15.26■□□□□ 0.03
COL5A1-206ENST00000465877 IMMTQ16891 758 aaKnown RBP15.26■□□□□ 0.03
COL5A1-206ENST00000465877 PPP4R3BQ5MIZ7 849 aa15.26■□□□□ 0.03
COL5A1-206ENST00000465877 MFSD6Q6ZSS7 791 aa15.26■□□□□ 0.03
COL5A1-206ENST00000465877 GMCL1P1Q8NEA9 526 aa15.26■□□□□ 0.03
COL5A1-206ENST00000465877 RAET1EQ8TD07 263 aa15.26■□□□□ 0.03
COL5A1-206ENST00000465877 COA7Q96BR5 231 aa15.26■□□□□ 0.03
COL5A1-206ENST00000465877 ARMC5Q96C12 935 aa15.26■□□□□ 0.03
COL5A1-206ENST00000465877 NUP88Q99567 741 aaPredicted RBP15.26■□□□□ 0.03
COL5A1-206ENST00000465877 PORCNQ9H237 461 aa15.26■□□□□ 0.03
COL5A1-206ENST00000465877 IL17RBQ9NRM6 502 aa15.26■□□□□ 0.03
COL5A1-206ENST00000465877 BTBD7Q9P203 1132 aa15.26■□□□□ 0.03
COL5A1-206ENST00000465877 GABRQQ9UN88 632 aa15.26■□□□□ 0.03
COL5A1-206ENST00000465877 STX8Q9UNK0 236 aa15.26■□□□□ 0.03
COL5A1-206ENST00000465877 MYH6P13533 1939 aa15.25■□□□□ 0.03
COL5A1-206ENST00000465877 F5H6K3 240 aa15.25■□□□□ 0.03
COL5A1-206ENST00000465877 FLT3LGP49771 235 aa15.25■□□□□ 0.03
COL5A1-206ENST00000465877 KLRC3Q07444 240 aa15.25■□□□□ 0.03
COL5A1-206ENST00000465877 COG2Q14746 738 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms