RNA–Protein interactions for RNA: ENST00000465315.1

CCDC115-204, Transcript of coiled-coil domain containing 115, humanhuman

TSL 2

Gene CCDC115, Length 3,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-204ENST00000465315 SETDB2Q96T68 719 aa12.91□□□□□ -0.34
CCDC115-204ENST00000465315 MORC2Q9Y6X9 1032 aaPredicted RBP12.91□□□□□ -0.34
CCDC115-204ENST00000465315 N4BP2Q86UW6 1770 aaPredicted RBP12.91□□□□□ -0.34
CCDC115-204ENST00000465315 PHLPP2Q6ZVD8 1323 aa12.91□□□□□ -0.34
CCDC115-204ENST00000465315 A0A087X0B3 334 aa12.91□□□□□ -0.34
CCDC115-204ENST00000465315 CD44P16070 742 aaKnown RBP12.91□□□□□ -0.34
CCDC115-204ENST00000465315 NAP1L1P55209 391 aaKnown RBP12.91□□□□□ -0.34
CCDC115-204ENST00000465315 FAM193AP78312 1265 aa12.91□□□□□ -0.34
CCDC115-204ENST00000465315 GABPB1Q06547 395 aaPredicted RBP12.91□□□□□ -0.34
CCDC115-204ENST00000465315 ITPK1Q13572 414 aa12.91□□□□□ -0.34
CCDC115-204ENST00000465315 CUL4BQ13620 913 aa12.91□□□□□ -0.34
CCDC115-204ENST00000465315 CCDC47Q96A33 483 aaKnown RBP12.91□□□□□ -0.34
CCDC115-204ENST00000465315 GPR101Q96P66 508 aaPredicted RBP12.91□□□□□ -0.34
CCDC115-204ENST00000465315 CTAGE1Q96RT6 745 aa12.91□□□□□ -0.34
CCDC115-204ENST00000465315 MRPL44Q9H9J2 332 aaKnown RBP12.91□□□□□ -0.34
CCDC115-204ENST00000465315 RBM28Q9NW13 759 aaKnown RBP12.91□□□□□ -0.34
CCDC115-204ENST00000465315 A0A0U1RQJ8 604 aa12.9□□□□□ -0.34
CCDC115-204ENST00000465315 PP2D1A8MPX8 630 aa12.9□□□□□ -0.34
CCDC115-204ENST00000465315 WNT7AO00755 349 aa12.9□□□□□ -0.34
CCDC115-204ENST00000465315 ACTN4O43707 911 aaKnown RBP12.9□□□□□ -0.34
CCDC115-204ENST00000465315 KIF20AO95235 890 aa12.9□□□□□ -0.34
CCDC115-204ENST00000465315 CALM1P0DP23 149 aa12.9□□□□□ -0.34
CCDC115-204ENST00000465315 CALM2P0DP24 149 aa12.9□□□□□ -0.34
CCDC115-204ENST00000465315 CALM3P0DP25 149 aa12.9□□□□□ -0.34
CCDC115-204ENST00000465315 SCG2P13521 617 aa12.9□□□□□ -0.34
CCDC115-204ENST00000465315 IBSPP21815 317 aaPredicted RBP12.9□□□□□ -0.34
CCDC115-204ENST00000465315 DNA2P51530 1060 aa12.9□□□□□ -0.34
CCDC115-204ENST00000465315 CHMP4BP1P59074 171 aa12.9□□□□□ -0.34
CCDC115-204ENST00000465315 PAK1Q13153 545 aa12.9□□□□□ -0.34
CCDC115-204ENST00000465315 LETM2Q2VYF4 491 aa12.9□□□□□ -0.34
CCDC115-204ENST00000465315 UTP14CQ5TAP6 766 aaKnown RBP12.9□□□□□ -0.34
CCDC115-204ENST00000465315 ATRIPQ8WXE1 791 aa12.9□□□□□ -0.34
CCDC115-204ENST00000465315 DRC1Q96MC2 740 aa12.9□□□□□ -0.34
CCDC115-204ENST00000465315 SRP68Q9UHB9 627 aaKnown RBP12.9□□□□□ -0.34
CCDC115-204ENST00000465315 SCN11AQ9UI33 1791 aa12.9□□□□□ -0.34
CCDC115-204ENST00000465315 ARFGEF2Q9Y6D5 1785 aa12.9□□□□□ -0.34
CCDC115-204ENST00000465315 VEGFAP15692 232 aaPredicted RBP12.9□□□□□ -0.34
CCDC115-204ENST00000465315 MECOMQ03112 1051 aa12.9□□□□□ -0.34
CCDC115-204ENST00000465315 GPS2Q13227 327 aa12.9□□□□□ -0.34
CCDC115-204ENST00000465315 INF2Q27J81 1249 aa12.9□□□□□ -0.34
CCDC115-204ENST00000465315 DTHD1Q6ZMT9 781 aa12.9□□□□□ -0.34
CCDC115-204ENST00000465315 C3orf67Q6ZVT6 689 aa12.9□□□□□ -0.34
CCDC115-204ENST00000465315 FERMT2Q96AC1 680 aa12.9□□□□□ -0.34
CCDC115-204ENST00000465315 KIF1AQ12756 1690 aa12.9□□□□□ -0.34
CCDC115-204ENST00000465315 CTAGE9A4FU28 777 aa12.9□□□□□ -0.34
CCDC115-204ENST00000465315 BMP15O95972 392 aa12.9□□□□□ -0.34
CCDC115-204ENST00000465315 TUBB4AP04350 444 aa12.9□□□□□ -0.34
CCDC115-204ENST00000465315 MTIF2P46199 727 aaKnown RBP12.9□□□□□ -0.34
CCDC115-204ENST00000465315 RPS8P62241 208 aaKnown RBP12.9□□□□□ -0.34
CCDC115-204ENST00000465315 TERF2Q15554 542 aa12.9□□□□□ -0.34
CCDC115-204ENST00000465315 SRBD1Q8N5C6 995 aaKnown RBP12.9□□□□□ -0.34
CCDC115-204ENST00000465315 EFCAB8A8MWE9 144 aa12.89□□□□□ -0.35
CCDC115-204ENST00000465315 TFRCP02786 760 aaKnown RBP12.89□□□□□ -0.35
CCDC115-204ENST00000465315 IDEP14735 1019 aa12.89□□□□□ -0.35
CCDC115-204ENST00000465315 TRIM21P19474 475 aaKnown RBP12.89□□□□□ -0.35
CCDC115-204ENST00000465315 LMAN1P49257 510 aa12.89□□□□□ -0.35
CCDC115-204ENST00000465315 ENOX2Q16206 610 aaKnown RBP12.89□□□□□ -0.35
CCDC115-204ENST00000465315 SOGA3Q5TF21 947 aa12.89□□□□□ -0.35
CCDC115-204ENST00000465315 CTR9Q6PD62 1173 aa12.89□□□□□ -0.35
CCDC115-204ENST00000465315 CERS3Q8IU89 383 aa12.89□□□□□ -0.35
CCDC115-204ENST00000465315 MAPKAPK5Q8IW41 473 aa12.89□□□□□ -0.35
CCDC115-204ENST00000465315 GDAP1L1Q96MZ0 367 aa12.89□□□□□ -0.35
CCDC115-204ENST00000465315 MINPP1Q9UNW1 487 aa12.89□□□□□ -0.35
CCDC115-204ENST00000465315 PARP3Q9Y6F1 533 aa12.89□□□□□ -0.35
CCDC115-204ENST00000465315 TRIM49BA6NDI0 452 aa12.89□□□□□ -0.35
CCDC115-204ENST00000465315 DIXDC1Q155Q3 683 aa12.89□□□□□ -0.35
CCDC115-204ENST00000465315 HSP90B2PQ58FF3 399 aa12.89□□□□□ -0.35
CCDC115-204ENST00000465315 CNGA4Q8IV77 575 aa12.89□□□□□ -0.35
CCDC115-204ENST00000465315 SLC35F6Q8N357 371 aa12.89□□□□□ -0.35
CCDC115-204ENST00000465315 TRIML1Q8N9V2 468 aa12.89□□□□□ -0.35
CCDC115-204ENST00000465315 NEK11Q8NG66 645 aa12.89□□□□□ -0.35
CCDC115-204ENST00000465315 L2HGDHQ9H9P8 463 aa12.89□□□□□ -0.35
CCDC115-204ENST00000465315 ZNHIT6Q9NWK9 470 aaKnown RBP12.89□□□□□ -0.35
CCDC115-204ENST00000465315 ZNF446Q9NWS9 450 aa12.89□□□□□ -0.35
CCDC115-204ENST00000465315 USP17L3A6NCW0 530 aa12.89□□□□□ -0.35
CCDC115-204ENST00000465315 USP17L4A6NCW7 530 aa12.89□□□□□ -0.35
CCDC115-204ENST00000465315 ENC1O14682 589 aa12.89□□□□□ -0.35
CCDC115-204ENST00000465315 ERCC5P28715 1186 aaPredicted RBP12.89□□□□□ -0.35
CCDC115-204ENST00000465315 OAS2P29728 719 aaKnown RBP12.89□□□□□ -0.35
CCDC115-204ENST00000465315 INTS5Q6P9B9 1019 aaKnown RBP12.89□□□□□ -0.35
CCDC115-204ENST00000465315 TRIM65Q6PJ69 517 aa12.89□□□□□ -0.35
CCDC115-204ENST00000465315 USP17L1Q7RTZ2 530 aa12.89□□□□□ -0.35
CCDC115-204ENST00000465315 SLC44A5Q8NCS7 719 aa12.89□□□□□ -0.35
CCDC115-204ENST00000465315 TGFBRAP1Q8WUH2 860 aa12.89□□□□□ -0.35
CCDC115-204ENST00000465315 CDK5RAP3Q96JB5 506 aa12.89□□□□□ -0.35
CCDC115-204ENST00000465315 FAM84BQ96KN1 310 aaPredicted RBP12.89□□□□□ -0.35
CCDC115-204ENST00000465315 PARD6BQ9BYG5 372 aa12.89□□□□□ -0.35
CCDC115-204ENST00000465315 TANGO6Q9C0B7 1094 aa12.89□□□□□ -0.35
CCDC115-204ENST00000465315 GNPATO15228 680 aa12.88□□□□□ -0.35
CCDC115-204ENST00000465315 PRPF3O43395 683 aaKnown RBP12.88□□□□□ -0.35
CCDC115-204ENST00000465315 CAMTA2O94983 1202 aa12.88□□□□□ -0.35
CCDC115-204ENST00000465315 NAPAP54920 295 aa12.88□□□□□ -0.35
CCDC115-204ENST00000465315 EIF6P56537 245 aaKnown RBP12.88□□□□□ -0.35
CCDC115-204ENST00000465315 ASIC1P78348 528 aa12.88□□□□□ -0.35
CCDC115-204ENST00000465315 RAD9BQ6WBX8 426 aa12.88□□□□□ -0.35
CCDC115-204ENST00000465315 PNMA1Q8ND90 353 aa12.88□□□□□ -0.35
CCDC115-204ENST00000465315 TRIM34Q9BYJ4 488 aa12.88□□□□□ -0.35
CCDC115-204ENST00000465315 ZHX3Q9H4I2 956 aa12.88□□□□□ -0.35
CCDC115-204ENST00000465315 KCNJ18B7U540 433 aa12.88□□□□□ -0.35
CCDC115-204ENST00000465315 TADA3O75528 432 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms