RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 STOX1Q6ZVD7 989 aa21.79■■□□□ 1.08
SCAMP3-204ENST00000465312 SMCR8Q8TEV9 937 aaPredicted RBP21.79■■□□□ 1.08
SCAMP3-204ENST00000465312 PARK7Q99497 189 aaKnown RBP21.79■■□□□ 1.08
SCAMP3-204ENST00000465312 TANGO6Q9C0B7 1094 aa21.79■■□□□ 1.08
SCAMP3-204ENST00000465312 VCPKMTQ9H867 229 aa21.79■■□□□ 1.08
SCAMP3-204ENST00000465312 ZFYVE28Q9HCC9 887 aa21.79■■□□□ 1.08
SCAMP3-204ENST00000465312 VCAM1P19320 739 aa21.78■■□□□ 1.08
SCAMP3-204ENST00000465312 MOGSQ13724 837 aa21.78■■□□□ 1.08
SCAMP3-204ENST00000465312 SART3Q15020 963 aaKnown RBP21.78■■□□□ 1.08
SCAMP3-204ENST00000465312 CCDC178Q5BJE1 867 aa21.78■■□□□ 1.08
SCAMP3-204ENST00000465312 GPAT2Q6NUI2 795 aa21.78■■□□□ 1.08
SCAMP3-204ENST00000465312 RPAP3Q9H6T3 665 aaPredicted RBP21.78■■□□□ 1.08
SCAMP3-204ENST00000465312 IL17RBQ9NRM6 502 aa21.78■■□□□ 1.08
SCAMP3-204ENST00000465312 ZSWIM5Q9P217 1185 aa21.78■■□□□ 1.08
SCAMP3-204ENST00000465312 CYP2C8P10632 490 aa21.77■■□□□ 1.08
SCAMP3-204ENST00000465312 CRHR2Q13324 411 aa21.77■■□□□ 1.08
SCAMP3-204ENST00000465312 KRT32Q14532 448 aa21.77■■□□□ 1.08
SCAMP3-204ENST00000465312 CHST3Q7LGC8 479 aa21.77■■□□□ 1.08
SCAMP3-204ENST00000465312 SIAH1Q8IUQ4 282 aa21.77■■□□□ 1.08
SCAMP3-204ENST00000465312 ZSCAN10Q96SZ4 725 aaPredicted RBP21.77■■□□□ 1.08
SCAMP3-204ENST00000465312 ZCCHC17Q9NP64 241 aaKnown RBP21.77■■□□□ 1.08
SCAMP3-204ENST00000465312 SAGE1Q9NXZ1 904 aa21.77■■□□□ 1.08
SCAMP3-204ENST00000465312 TNKSO95271 1327 aa21.77■■□□□ 1.07
SCAMP3-204ENST00000465312 HSPA4P34932 840 aa21.76■■□□□ 1.07
SCAMP3-204ENST00000465312 CYB5R4Q7L1T6 521 aa21.76■■□□□ 1.07
SCAMP3-204ENST00000465312 NKX2-3Q8TAU0 364 aa21.76■■□□□ 1.07
SCAMP3-204ENST00000465312 LPAR1Q92633 364 aa21.76■■□□□ 1.07
SCAMP3-204ENST00000465312 C12orf42Q96LP6 360 aa21.76■■□□□ 1.07
SCAMP3-204ENST00000465312 TCP11L1Q9NUJ3 509 aa21.76■■□□□ 1.07
SCAMP3-204ENST00000465312 USP17L15C9J2P7 530 aa21.75■■□□□ 1.07
SCAMP3-204ENST00000465312 USP17L13C9JLJ4 530 aa21.75■■□□□ 1.07
SCAMP3-204ENST00000465312 USP17L11C9JVI0 530 aa21.75■■□□□ 1.07
SCAMP3-204ENST00000465312 USP17L18D6R9N7 530 aa21.75■■□□□ 1.07
SCAMP3-204ENST00000465312 USP17L22D6RA61 530 aa21.75■■□□□ 1.07
SCAMP3-204ENST00000465312 USP17L17D6RBQ6 530 aa21.75■■□□□ 1.07
SCAMP3-204ENST00000465312 USP17L19D6RCP7 530 aa21.75■■□□□ 1.07
SCAMP3-204ENST00000465312 USP17L20D6RJB6 530 aa21.75■■□□□ 1.07
SCAMP3-204ENST00000465312 F5H6K3 240 aa21.75■■□□□ 1.07
SCAMP3-204ENST00000465312 IFIT3O14879 490 aaKnown RBP21.75■■□□□ 1.07
SCAMP3-204ENST00000465312 FOXN1O15353 648 aa21.75■■□□□ 1.07
SCAMP3-204ENST00000465312 TOP1P11387 765 aaKnown RBP21.75■■□□□ 1.07
SCAMP3-204ENST00000465312 KLRC3Q07444 240 aa21.75■■□□□ 1.07
SCAMP3-204ENST00000465312 USP17L24Q0WX57 530 aa21.75■■□□□ 1.07
SCAMP3-204ENST00000465312 IKQ13123 557 aaPredicted RBP21.75■■□□□ 1.07
SCAMP3-204ENST00000465312 USP26Q9BXU7 913 aa21.75■■□□□ 1.07
SCAMP3-204ENST00000465312 KAT14Q9H8E8 782 aa21.75■■□□□ 1.07
SCAMP3-204ENST00000465312 WDR46O15213 610 aaKnown RBP21.74■■□□□ 1.07
SCAMP3-204ENST00000465312 NDUFB10O96000 172 aa21.74■■□□□ 1.07
SCAMP3-204ENST00000465312 MCM5P33992 734 aa21.74■■□□□ 1.07
SCAMP3-204ENST00000465312 CCDC96Q2M329 555 aa21.74■■□□□ 1.07
SCAMP3-204ENST00000465312 FAM83BQ5T0W9 1011 aa21.74■■□□□ 1.07
SCAMP3-204ENST00000465312 IFIT1BQ5T764 474 aaKnown RBP21.74■■□□□ 1.07
SCAMP3-204ENST00000465312 SLFN13Q68D06 897 aa21.74■■□□□ 1.07
SCAMP3-204ENST00000465312 RASEFQ8IZ41 740 aa21.74■■□□□ 1.07
SCAMP3-204ENST00000465312 NEK1Q96PY6 1258 aa21.74■■□□□ 1.07
SCAMP3-204ENST00000465312 NUP88Q99567 741 aaPredicted RBP21.74■■□□□ 1.07
SCAMP3-204ENST00000465312 TMEM47Q9BQJ4 181 aa21.74■■□□□ 1.07
SCAMP3-204ENST00000465312 ASCC2Q9H1I8 757 aaPredicted RBP21.74■■□□□ 1.07
SCAMP3-204ENST00000465312 SLC45A1Q9Y2W3 748 aa21.74■■□□□ 1.07
SCAMP3-204ENST00000465312 EPB41L2O43491 1005 aaKnown RBP21.73■■□□□ 1.07
SCAMP3-204ENST00000465312 PRC1O43663 620 aa21.73■■□□□ 1.07
SCAMP3-204ENST00000465312 CTCFP49711 727 aaPredicted RBP21.73■■□□□ 1.07
SCAMP3-204ENST00000465312 WTAPQ15007 396 aa21.73■■□□□ 1.07
SCAMP3-204ENST00000465312 C8orf34Q49A92 452 aa21.73■■□□□ 1.07
SCAMP3-204ENST00000465312 TMEM67Q5HYA8 995 aa21.73■■□□□ 1.07
SCAMP3-204ENST00000465312 KIAA1755Q5JYT7 1200 aa21.73■■□□□ 1.07
SCAMP3-204ENST00000465312 MB21D2Q8IYB1 491 aaPredicted RBP21.73■■□□□ 1.07
SCAMP3-204ENST00000465312 MKL1Q969V6 931 aa21.73■■□□□ 1.07
SCAMP3-204ENST00000465312 JAKMIP1Q96N16 626 aaKnown RBP21.73■■□□□ 1.07
SCAMP3-204ENST00000465312 TTC14Q96N46 770 aa21.73■■□□□ 1.07
SCAMP3-204ENST00000465312 CPA4Q9UI42 421 aa21.73■■□□□ 1.07
SCAMP3-204ENST00000465312 SNX14Q9Y5W7 946 aa21.73■■□□□ 1.07
SCAMP3-204ENST00000465312 PCNTO95613 3336 aa21.73■■□□□ 1.07
SCAMP3-204ENST00000465312 FLOT1O75955 427 aa21.72■■□□□ 1.07
SCAMP3-204ENST00000465312 ECM2O94769 699 aaPredicted RBP21.72■■□□□ 1.07
SCAMP3-204ENST00000465312 SLC1A4P43007 532 aa21.72■■□□□ 1.07
SCAMP3-204ENST00000465312 FGD1P98174 961 aa21.72■■□□□ 1.07
SCAMP3-204ENST00000465312 DGKHQ86XP1 1220 aa21.72■■□□□ 1.07
SCAMP3-204ENST00000465312 ENAHQ8N8S7 591 aaPredicted RBP21.72■■□□□ 1.07
SCAMP3-204ENST00000465312 HOXA7P31268 230 aaPredicted RBP21.71■■□□□ 1.07
SCAMP3-204ENST00000465312 LBX1P52954 281 aa21.71■■□□□ 1.07
SCAMP3-204ENST00000465312 ADCK5Q3MIX3 580 aa21.71■■□□□ 1.07
SCAMP3-204ENST00000465312 NFXL1Q6ZNB6 911 aa21.71■■□□□ 1.07
SCAMP3-204ENST00000465312 CATSPERGQ6ZRH7 1159 aa21.71■■□□□ 1.07
SCAMP3-204ENST00000465312 GMCL1P1Q8NEA9 526 aa21.71■■□□□ 1.07
SCAMP3-204ENST00000465312 PAGR1Q9BTK6 254 aa21.71■■□□□ 1.07
SCAMP3-204ENST00000465312 R3HDMLQ9H3Y0 253 aa21.71■■□□□ 1.07
SCAMP3-204ENST00000465312 SYNPO2Q9UMS6 1093 aa21.71■■□□□ 1.07
SCAMP3-204ENST00000465312 CTDP1Q9Y5B0 961 aaPredicted RBP21.71■■□□□ 1.07
SCAMP3-204ENST00000465312 TLR2O60603 784 aa21.7■■□□□ 1.06
SCAMP3-204ENST00000465312 SEC24BO95487 1268 aa21.7■■□□□ 1.06
SCAMP3-204ENST00000465312 HSPA8P11142 646 aaKnown RBP21.7■■□□□ 1.06
SCAMP3-204ENST00000465312 BMP3P12645 472 aa21.7■■□□□ 1.06
SCAMP3-204ENST00000465312 PSMA5P28066 241 aa21.7■■□□□ 1.06
SCAMP3-204ENST00000465312 PNMA1Q8ND90 353 aa21.7■■□□□ 1.06
SCAMP3-204ENST00000465312 P2RX7Q99572 595 aaKnown RBP21.7■■□□□ 1.06
SCAMP3-204ENST00000465312 LRRC2Q9BYS8 371 aa21.7■■□□□ 1.06
SCAMP3-204ENST00000465312 UPF2Q9HAU5 1272 aaKnown RBP21.7■■□□□ 1.06
SCAMP3-204ENST00000465312 HMGB1P09429 215 aaKnown RBP21.69■■□□□ 1.06
SCAMP3-204ENST00000465312 CASTP20810 708 aaKnown RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms