RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ACRP10323 421 aa9.54□□□□□ -0.88
PTCD3-205ENST00000464541 NAALADL2Q58DX5 795 aa9.54□□□□□ -0.88
PTCD3-205ENST00000464541 BCL7CQ8WUZ0 217 aaPredicted RBP9.54□□□□□ -0.88
PTCD3-205ENST00000464541 ASB11Q8WXH4 323 aa9.54□□□□□ -0.88
PTCD3-205ENST00000464541 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.54□□□□□ -0.882e-12■■□□□ 11.8
PTCD3-205ENST00000464541 ST14Q9Y5Y6 855 aa9.54□□□□□ -0.88
PTCD3-205ENST00000464541 SSBP05455 408 aaKnown RBP eCLIP9.53□□□□□ -0.88
PTCD3-205ENST00000464541 CASP7P55210 303 aa9.53□□□□□ -0.88
PTCD3-205ENST00000464541 TNK2Q07912 1038 aa9.53□□□□□ -0.88
PTCD3-205ENST00000464541 NBPF12Q5TAG4 269 aaPredicted RBP9.53□□□□□ -0.88
PTCD3-205ENST00000464541 DTWD2Q8NBA8 298 aa9.53□□□□□ -0.88
PTCD3-205ENST00000464541 Q96M66 194 aa9.53□□□□□ -0.88
PTCD3-205ENST00000464541 PITPNM2Q9BZ72 1349 aa9.53□□□□□ -0.88
PTCD3-205ENST00000464541 TMEM192Q8IY95 271 aa9.52□□□□□ -0.89
PTCD3-205ENST00000464541 SMARCC1Q92922 1105 aaPredicted RBP9.52□□□□□ -0.89
PTCD3-205ENST00000464541 SLC6A18Q96N87 628 aa9.52□□□□□ -0.89
PTCD3-205ENST00000464541 GPR62Q9BZJ7 368 aa9.52□□□□□ -0.89
PTCD3-205ENST00000464541 TRIT1Q9H3H1 467 aaKnown RBP9.52□□□□□ -0.89
PTCD3-205ENST00000464541 SUCOQ9UBS9 1254 aaKnown RBP9.52□□□□□ -0.89
PTCD3-205ENST00000464541 DNAJA1P31689 397 aaKnown RBP9.51□□□□□ -0.89
PTCD3-205ENST00000464541 PMS1P54277 932 aaKnown RBP9.51□□□□□ -0.89
PTCD3-205ENST00000464541 AOC3Q16853 763 aa9.51□□□□□ -0.89
PTCD3-205ENST00000464541 BBS9Q3SYG4 887 aa9.51□□□□□ -0.89
PTCD3-205ENST00000464541 TNNI3KQ59H18 835 aa9.51□□□□□ -0.89
PTCD3-205ENST00000464541 UNC5AQ6ZN44 842 aa9.51□□□□□ -0.89
PTCD3-205ENST00000464541 Q8N3U1 123 aa9.51□□□□□ -0.89
PTCD3-205ENST00000464541 RUFY4Q6ZNE9 571 aa9.5□□□□□ -0.89
PTCD3-205ENST00000464541 TTC6Q86TZ1 520 aa9.5□□□□□ -0.89
PTCD3-205ENST00000464541 MCF2L2Q86YR7 1114 aa9.5□□□□□ -0.89
PTCD3-205ENST00000464541 AGBL5Q8NDL9 886 aa9.5□□□□□ -0.89
PTCD3-205ENST00000464541 HSPA12BQ96MM6 686 aa9.5□□□□□ -0.89
PTCD3-205ENST00000464541 PHAXQ9H814 394 aaKnown RBP9.5□□□□□ -0.89
PTCD3-205ENST00000464541 SEMA3GQ9NS98 782 aa9.5□□□□□ -0.89
PTCD3-205ENST00000464541 GPATCH2Q9NW75 528 aa9.5□□□□□ -0.89
PTCD3-205ENST00000464541 SRFP11831 508 aa9.49□□□□□ -0.89
PTCD3-205ENST00000464541 CDKAL1Q5VV42 579 aa9.49□□□□□ -0.89
PTCD3-205ENST00000464541 FLCNQ8NFG4 579 aa9.49□□□□□ -0.89
PTCD3-205ENST00000464541 ENOX1Q8TC92 643 aaKnown RBP9.49□□□□□ -0.89
PTCD3-205ENST00000464541 ANAPC16Q96DE5 110 aa9.49□□□□□ -0.89
PTCD3-205ENST00000464541 A0A1W2PQH9 124 aa9.48□□□□□ -0.89
PTCD3-205ENST00000464541 NBPF9Q3BBW0 867 aa9.48□□□□□ -0.89
PTCD3-205ENST00000464541 TMPRSS7Q7RTY8 843 aa9.48□□□□□ -0.89
PTCD3-205ENST00000464541 ASCC2Q9H1I8 757 aaPredicted RBP9.48□□□□□ -0.89
PTCD3-205ENST00000464541 PRR13Q9NZ81 148 aa9.48□□□□□ -0.89
PTCD3-205ENST00000464541 LMCD1Q9NZU5 365 aa9.48□□□□□ -0.89
PTCD3-205ENST00000464541 ZNF214Q9UL59 606 aaPredicted RBP9.48□□□□□ -0.89
PTCD3-205ENST00000464541 H3BS24 57 aa9.47□□□□□ -0.89
PTCD3-205ENST00000464541 LRRN2O75325 713 aa9.47□□□□□ -0.89
PTCD3-205ENST00000464541 ZYXQ15942 572 aaKnown RBP9.47□□□□□ -0.89
PTCD3-205ENST00000464541 ANGEL2Q5VTE6 544 aaKnown RBP9.47□□□□□ -0.89
PTCD3-205ENST00000464541 NFXL1Q6ZNB6 911 aa9.47□□□□□ -0.89
PTCD3-205ENST00000464541 MKRN2Q9H000 416 aaKnown RBP9.47□□□□□ -0.89
PTCD3-205ENST00000464541 DUSP15Q9H1R2 295 aaPredicted RBP9.47□□□□□ -0.89
PTCD3-205ENST00000464541 PAK6Q9NQU5 681 aaPredicted RBP9.47□□□□□ -0.89
PTCD3-205ENST00000464541 PRKAG3Q9UGI9 489 aa9.47□□□□□ -0.89
PTCD3-205ENST00000464541 ADAMTS4O75173 837 aa9.46□□□□□ -0.9
PTCD3-205ENST00000464541 BNIP3Q12983 259 aa9.46□□□□□ -0.9
PTCD3-205ENST00000464541 ANKRD39Q53RE8 183 aa9.46□□□□□ -0.9
PTCD3-205ENST00000464541 NBPF11Q86T75 865 aa9.46□□□□□ -0.9
PTCD3-205ENST00000464541 WFDC3Q8IUB2 231 aa9.46□□□□□ -0.9
PTCD3-205ENST00000464541 FAM169BQ8N8A8 192 aa9.46□□□□□ -0.9
PTCD3-205ENST00000464541 CD8BP10966 210 aa9.45□□□□□ -0.9
PTCD3-205ENST00000464541 GP2P55259 537 aaKnown RBP9.45□□□□□ -0.9
PTCD3-205ENST00000464541 IKZF1Q13422 519 aa9.45□□□□□ -0.9
PTCD3-205ENST00000464541 PPP2R5EQ16537 467 aa9.45□□□□□ -0.9
PTCD3-205ENST00000464541 SPRED2Q7Z698 418 aa9.45□□□□□ -0.9
PTCD3-205ENST00000464541 TSPYL5Q86VY4 417 aaPredicted RBP9.45□□□□□ -0.9
PTCD3-205ENST00000464541 UBE2FQ969M7 185 aa9.45□□□□□ -0.9
PTCD3-205ENST00000464541 PCDHB12Q9Y5F1 795 aa9.45□□□□□ -0.9
PTCD3-205ENST00000464541 NMIQ13287 307 aaPredicted RBP9.44□□□□□ -0.9
PTCD3-205ENST00000464541 AUHQ13825 339 aaKnown RBP9.44□□□□□ -0.9
PTCD3-205ENST00000464541 GAB4Q2WGN9 574 aa9.44□□□□□ -0.9
PTCD3-205ENST00000464541 TP53INP2Q8IXH6 220 aa9.44□□□□□ -0.9
PTCD3-205ENST00000464541 CCDC144CPQ8IYA2 1237 aa9.44□□□□□ -0.9
PTCD3-205ENST00000464541 SYTL5Q8TDW5 730 aaPredicted RBP9.44□□□□□ -0.9
PTCD3-205ENST00000464541 ZNF512BQ96KM6 892 aaPredicted RBP9.44□□□□□ -0.9
PTCD3-205ENST00000464541 ZNF408Q9H9D4 720 aa9.44□□□□□ -0.9
PTCD3-205ENST00000464541 ATP13A1Q9HD20 1204 aa9.44□□□□□ -0.9
PTCD3-205ENST00000464541 ZSWIM5Q9P217 1185 aa9.44□□□□□ -0.9
PTCD3-205ENST00000464541 MRVI1Q9Y6F6 885 aa9.44□□□□□ -0.9
PTCD3-205ENST00000464541 LTBP3Q9NS15 1303 aa9.44□□□□□ -0.9
PTCD3-205ENST00000464541 FAM86C2PA6NEL3 165 aa9.43□□□□□ -0.9
PTCD3-205ENST00000464541 SMAD7O15105 426 aaKnown RBP9.43□□□□□ -0.9
PTCD3-205ENST00000464541 FUT4P22083 530 aa9.43□□□□□ -0.9
PTCD3-205ENST00000464541 SF3A1Q15459 793 aaKnown RBP9.43□□□□□ -0.9
PTCD3-205ENST00000464541 CLEC16AQ2KHT3 1053 aa9.43□□□□□ -0.9
PTCD3-205ENST00000464541 ZNF574Q6ZN55 896 aaPredicted RBP9.43□□□□□ -0.9
PTCD3-205ENST00000464541 PPFIBP1Q86W92 1011 aa9.43□□□□□ -0.9
PTCD3-205ENST00000464541 C7orf61Q8IZ16 206 aa9.43□□□□□ -0.9
PTCD3-205ENST00000464541 DAGLBQ8NCG7 672 aa9.43□□□□□ -0.9
PTCD3-205ENST00000464541 ARMC5Q96C12 935 aa9.43□□□□□ -0.9
PTCD3-205ENST00000464541 TANGO6Q9C0B7 1094 aa9.43□□□□□ -0.9
PTCD3-205ENST00000464541 ACTR10Q9NZ32 417 aa9.43□□□□□ -0.9
PTCD3-205ENST00000464541 C9IYK1 514 aa9.42□□□□□ -0.9
PTCD3-205ENST00000464541 SIGLEC6O43699 453 aa9.42□□□□□ -0.9
PTCD3-205ENST00000464541 TPP2P29144 1249 aaPredicted RBP9.42□□□□□ -0.9
PTCD3-205ENST00000464541 ETFBP38117 255 aa9.42□□□□□ -0.9
PTCD3-205ENST00000464541 SLC7A5Q01650 507 aa9.42□□□□□ -0.9
PTCD3-205ENST00000464541 ATP2B1P20020 1258 aa9.41□□□□□ -0.9
PTCD3-205ENST00000464541 NCAPHQ15003 741 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms