RNA–Protein interactions for RNA: ENST00000464266.1

HOXB3-203, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-203ENST00000464266 SLC5A4Q9NY91 659 aa6.73□□□□□ -1.33
HOXB3-203ENST00000464266 RGS17Q9UGC6 210 aaPredicted RBP6.73□□□□□ -1.33
HOXB3-203ENST00000464266 TRIM33Q9UPN9 1127 aa6.73□□□□□ -1.33
HOXB3-203ENST00000464266 C3P01024 1663 aa6.73□□□□□ -1.33
HOXB3-203ENST00000464266 CFAP74Q9C0B2 1584 aa6.73□□□□□ -1.33
HOXB3-203ENST00000464266 DENND4BO75064 1496 aaPredicted RBP6.73□□□□□ -1.33
HOXB3-203ENST00000464266 CAMSAP1Q5T5Y3 1602 aa6.72□□□□□ -1.33
HOXB3-203ENST00000464266 ANKRD34BA5PLL1 514 aa6.72□□□□□ -1.33
HOXB3-203ENST00000464266 SOX1O00570 391 aaPredicted RBP6.72□□□□□ -1.33
HOXB3-203ENST00000464266 AKAP10O43572 662 aa6.72□□□□□ -1.33
HOXB3-203ENST00000464266 MAN1A2O60476 641 aa6.72□□□□□ -1.33
HOXB3-203ENST00000464266 EIF4EBP3O60516 100 aaPredicted RBP6.72□□□□□ -1.33
HOXB3-203ENST00000464266 FGFR3P22607 806 aa6.72□□□□□ -1.33
HOXB3-203ENST00000464266 CDC27P30260 824 aa6.72□□□□□ -1.33
HOXB3-203ENST00000464266 SUMO1P63165 101 aaKnown RBP6.72□□□□□ -1.33
HOXB3-203ENST00000464266 ITKQ08881 620 aa6.72□□□□□ -1.33
HOXB3-203ENST00000464266 BRD3Q15059 726 aa6.72□□□□□ -1.33
HOXB3-203ENST00000464266 DBN1Q16643 649 aa6.72□□□□□ -1.33
HOXB3-203ENST00000464266 YOD1Q5VVQ6 348 aaPredicted RBP6.72□□□□□ -1.33
HOXB3-203ENST00000464266 RNF219Q5W0B1 726 aaPredicted RBP6.72□□□□□ -1.33
HOXB3-203ENST00000464266 ELMSAN1Q6PJG2 1045 aa6.72□□□□□ -1.33
HOXB3-203ENST00000464266 TRIM67Q6ZTA4 783 aa6.72□□□□□ -1.33
HOXB3-203ENST00000464266 C14orf80Q86SX3 495 aa6.72□□□□□ -1.33
HOXB3-203ENST00000464266 DHRS1Q96LJ7 313 aa6.72□□□□□ -1.33
HOXB3-203ENST00000464266 ZFP42Q96MM3 310 aa6.72□□□□□ -1.33
HOXB3-203ENST00000464266 MPHOSPH6Q99547 160 aaKnown RBP6.72□□□□□ -1.33
HOXB3-203ENST00000464266 CORO1BQ9BR76 489 aa6.72□□□□□ -1.33
HOXB3-203ENST00000464266 SMG9Q9H0W8 520 aaKnown RBP6.72□□□□□ -1.33
HOXB3-203ENST00000464266 ARNT2Q9HBZ2 717 aa6.72□□□□□ -1.33
HOXB3-203ENST00000464266 KRT82Q9NSB4 513 aa6.72□□□□□ -1.33
HOXB3-203ENST00000464266 SFMBT1Q9UHJ3 866 aa6.72□□□□□ -1.33
HOXB3-203ENST00000464266 PHF24Q9UPV7 400 aa6.72□□□□□ -1.33
HOXB3-203ENST00000464266 IGF1RP08069 1367 aa6.71□□□□□ -1.33
HOXB3-203ENST00000464266 CHURC1-FNTBB4DL54 471 aa6.71□□□□□ -1.34
HOXB3-203ENST00000464266 CYP11A1P05108 521 aa6.71□□□□□ -1.34
HOXB3-203ENST00000464266 PGRP06401 933 aa6.71□□□□□ -1.34
HOXB3-203ENST00000464266 PPP2R2AP63151 447 aa6.71□□□□□ -1.34
HOXB3-203ENST00000464266 MTMR1Q13613 665 aa6.71□□□□□ -1.34
HOXB3-203ENST00000464266 SAFB2Q14151 953 aaKnown RBP eCLIP6.71□□□□□ -1.34
HOXB3-203ENST00000464266 TRIM46Q7Z4K8 759 aa6.71□□□□□ -1.34
HOXB3-203ENST00000464266 APBB1IPQ7Z5R6 666 aaPredicted RBP6.71□□□□□ -1.34
HOXB3-203ENST00000464266 SYT9Q86SS6 491 aa6.71□□□□□ -1.34
HOXB3-203ENST00000464266 TRIM22Q8IYM9 498 aa6.71□□□□□ -1.34
HOXB3-203ENST00000464266 PPP1R14AQ96A00 147 aa6.71□□□□□ -1.34
HOXB3-203ENST00000464266 SOX17Q9H6I2 414 aaPredicted RBP6.71□□□□□ -1.34
HOXB3-203ENST00000464266 AASDHPPTQ9NRN7 309 aa6.71□□□□□ -1.34
HOXB3-203ENST00000464266 ADAM30Q9UKF2 790 aa6.71□□□□□ -1.34
HOXB3-203ENST00000464266 ZNF142P52746 1687 aaPredicted RBP6.71□□□□□ -1.34
HOXB3-203ENST00000464266 HECW1Q76N89 1606 aa6.7□□□□□ -1.34
HOXB3-203ENST00000464266 E2F8A0AVK6 867 aa6.7□□□□□ -1.34
HOXB3-203ENST00000464266 PRAMEF27A3QJZ7 478 aa6.7□□□□□ -1.34
HOXB3-203ENST00000464266 H3BRJ5 948 aa6.7□□□□□ -1.34
HOXB3-203ENST00000464266 NPTXRO95502 500 aa6.7□□□□□ -1.34
HOXB3-203ENST00000464266 EPHA1P21709 976 aa6.7□□□□□ -1.34
HOXB3-203ENST00000464266 POLR2BP30876 1174 aaKnown RBP6.7□□□□□ -1.34
HOXB3-203ENST00000464266 NEK4P51957 841 aa6.7□□□□□ -1.34
HOXB3-203ENST00000464266 CYFIP1Q7L576 1253 aa6.7□□□□□ -1.34
HOXB3-203ENST00000464266 TICAM2Q86XR7 235 aa6.7□□□□□ -1.34
HOXB3-203ENST00000464266 PASD1Q8IV76 773 aa6.7□□□□□ -1.34
HOXB3-203ENST00000464266 SLC7A3Q8WY07 619 aa6.7□□□□□ -1.34
HOXB3-203ENST00000464266 FAM86C1Q9NVL1 165 aa6.7□□□□□ -1.34
HOXB3-203ENST00000464266 PLA2R1Q13018 1463 aa6.7□□□□□ -1.34
HOXB3-203ENST00000464266 CPS1P31327 1500 aa6.7□□□□□ -1.34
HOXB3-203ENST00000464266 TCOF1Q13428 1488 aaKnown RBP6.69□□□□□ -1.34
HOXB3-203ENST00000464266 DCDC2CA8MYV0 355 aa6.69□□□□□ -1.34
HOXB3-203ENST00000464266 GPR39O43194 453 aa6.69□□□□□ -1.34
HOXB3-203ENST00000464266 PRODHO43272 600 aa6.69□□□□□ -1.34
HOXB3-203ENST00000464266 BRINP1O60477 761 aa6.69□□□□□ -1.34
HOXB3-203ENST00000464266 SIN3BO75182 1162 aa6.69□□□□□ -1.34
HOXB3-203ENST00000464266 DNAJC8O75937 253 aaPredicted RBP6.69□□□□□ -1.34
HOXB3-203ENST00000464266 LDHAP00338 332 aaKnown RBP6.69□□□□□ -1.34
HOXB3-203ENST00000464266 FGFR1P11362 822 aa6.69□□□□□ -1.34
HOXB3-203ENST00000464266 GRK4P32298 578 aa6.69□□□□□ -1.34
HOXB3-203ENST00000464266 ARL4DP49703 201 aa6.69□□□□□ -1.34
HOXB3-203ENST00000464266 PMS1P54277 932 aaKnown RBP6.69□□□□□ -1.34
HOXB3-203ENST00000464266 PIN1Q13526 163 aaPredicted RBP6.69□□□□□ -1.34
HOXB3-203ENST00000464266 STAT4Q14765 748 aa6.69□□□□□ -1.34
HOXB3-203ENST00000464266 POU4F3Q15319 338 aa6.69□□□□□ -1.34
HOXB3-203ENST00000464266 DHCR24Q15392 516 aa6.69□□□□□ -1.34
HOXB3-203ENST00000464266 SYCP2LQ5T4T6 812 aa6.69□□□□□ -1.34
HOXB3-203ENST00000464266 HEATR6Q6AI08 1181 aaKnown RBP6.69□□□□□ -1.34
HOXB3-203ENST00000464266 GDF6Q6KF10 455 aaPredicted RBP6.69□□□□□ -1.34
HOXB3-203ENST00000464266 NSMFQ6X4W1 530 aa6.69□□□□□ -1.34
HOXB3-203ENST00000464266 ZBTB46Q86UZ6 589 aa6.69□□□□□ -1.34
HOXB3-203ENST00000464266 CACTIN-AS1Q8N1I8 211 aa6.69□□□□□ -1.34
HOXB3-203ENST00000464266 SAMD3Q8N6K7 520 aa6.69□□□□□ -1.34
HOXB3-203ENST00000464266 LRRN4CLQ8ND94 238 aa6.69□□□□□ -1.34
HOXB3-203ENST00000464266 TTC8Q8TAM2 541 aa6.69□□□□□ -1.34
HOXB3-203ENST00000464266 CHMP4CQ96CF2 233 aa6.69□□□□□ -1.34
HOXB3-203ENST00000464266 GMCL1Q96IK5 515 aa6.69□□□□□ -1.34
HOXB3-203ENST00000464266 UBA5Q9GZZ9 404 aa6.69□□□□□ -1.34
HOXB3-203ENST00000464266 CDH19Q9H159 772 aa6.69□□□□□ -1.34
HOXB3-203ENST00000464266 CCDC86Q9H6F5 360 aaKnown RBP6.69□□□□□ -1.34
HOXB3-203ENST00000464266 NDOR1Q9UHB4 597 aa6.69□□□□□ -1.34
HOXB3-203ENST00000464266 SLC6A14Q9UN76 642 aa6.69□□□□□ -1.34
HOXB3-203ENST00000464266 C9orf84Q5VXU9 1444 aa6.68□□□□□ -1.34
HOXB3-203ENST00000464266 SLC35F4A4IF30 521 aa6.68□□□□□ -1.34
HOXB3-203ENST00000464266 GOLGA6CA6NDK9 693 aa6.68□□□□□ -1.34
HOXB3-203ENST00000464266 GOLGA6BA6NDN3 693 aa6.68□□□□□ -1.34
HOXB3-203ENST00000464266 TP53P04637 393 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms