RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 VCAM1P19320 739 aa23.87■■□□□ 1.41
NUP43-205ENST00000463048 COL9A3Q14050 684 aaPredicted RBP23.87■■□□□ 1.41
NUP43-205ENST00000463048 VCPKMTQ9H867 229 aa23.87■■□□□ 1.41
NUP43-205ENST00000463048 GOPCQ9HD26 462 aa23.87■■□□□ 1.41
NUP43-205ENST00000463048 ISY1Q9ULR0 285 aaKnown RBP23.87■■□□□ 1.41
NUP43-205ENST00000463048 FOXN1O15353 648 aa23.86■■□□□ 1.41
NUP43-205ENST00000463048 ZKSCAN1P17029 563 aaPredicted RBP23.86■■□□□ 1.41
NUP43-205ENST00000463048 HSPA4P34932 840 aa23.86■■□□□ 1.41
NUP43-205ENST00000463048 CRHR2Q13324 411 aa23.86■■□□□ 1.41
NUP43-205ENST00000463048 IQCA1Q86XH1 822 aa23.86■■□□□ 1.41
NUP43-205ENST00000463048 ZSCAN10Q96SZ4 725 aaPredicted RBP23.86■■□□□ 1.41
NUP43-205ENST00000463048 NUP88Q99567 741 aaPredicted RBP23.86■■□□□ 1.41
NUP43-205ENST00000463048 UBAC1Q9BSL1 405 aa23.86■■□□□ 1.41
NUP43-205ENST00000463048 RPAP3Q9H6T3 665 aaPredicted RBP23.86■■□□□ 1.41
NUP43-205ENST00000463048 PCNTO95613 3336 aa23.86■■□□□ 1.41
NUP43-205ENST00000463048 ALDH1A1P00352 501 aa23.85■■□□□ 1.41
NUP43-205ENST00000463048 ADCK5Q3MIX3 580 aa23.85■■□□□ 1.41
NUP43-205ENST00000463048 TANGO6Q9C0B7 1094 aa23.85■■□□□ 1.41
NUP43-205ENST00000463048 TCP11L1Q9NUJ3 509 aa23.85■■□□□ 1.41
NUP43-205ENST00000463048 TNKSO95271 1327 aa23.84■■□□□ 1.41
NUP43-205ENST00000463048 F5H6K3 240 aa23.84■■□□□ 1.41
NUP43-205ENST00000463048 ECM2O94769 699 aaPredicted RBP23.84■■□□□ 1.41
NUP43-205ENST00000463048 IRX3P78415 501 aaPredicted RBP23.84■■□□□ 1.41
NUP43-205ENST00000463048 KLRC3Q07444 240 aa23.84■■□□□ 1.41
NUP43-205ENST00000463048 RASGRP2Q7LDG7 609 aa23.84■■□□□ 1.41
NUP43-205ENST00000463048 MB21D2Q8IYB1 491 aaPredicted RBP23.84■■□□□ 1.41
NUP43-205ENST00000463048 C12orf42Q96LP6 360 aa23.84■■□□□ 1.41
NUP43-205ENST00000463048 TMEM47Q9BQJ4 181 aa23.84■■□□□ 1.41
NUP43-205ENST00000463048 SNX14Q9Y5W7 946 aa23.84■■□□□ 1.41
NUP43-205ENST00000463048 IFIT3O14879 490 aaKnown RBP23.83■■□□□ 1.41
NUP43-205ENST00000463048 NDUFB10O96000 172 aa23.83■■□□□ 1.41
NUP43-205ENST00000463048 OSBPP22059 807 aa23.83■■□□□ 1.41
NUP43-205ENST00000463048 MCCP23508 829 aa23.83■■□□□ 1.41
NUP43-205ENST00000463048 ANTXR2P58335 489 aa23.83■■□□□ 1.41
NUP43-205ENST00000463048 PABPC4Q13310 644 aaKnown RBP eCLIP23.83■■□□□ 1.41
NUP43-205ENST00000463048 FAM83BQ5T0W9 1011 aa23.83■■□□□ 1.41
NUP43-205ENST00000463048 RCSD1Q6JBY9 416 aa23.83■■□□□ 1.41
NUP43-205ENST00000463048 MKL1Q969V6 931 aa23.83■■□□□ 1.41
NUP43-205ENST00000463048 LRRC2Q9BYS8 371 aa23.83■■□□□ 1.41
NUP43-205ENST00000463048 ASCC2Q9H1I8 757 aaPredicted RBP23.83■■□□□ 1.41
NUP43-205ENST00000463048 ZFYVE28Q9HCC9 887 aa23.83■■□□□ 1.41
NUP43-205ENST00000463048 CA12O43570 354 aa23.82■■□□□ 1.4
NUP43-205ENST00000463048 PRC1O43663 620 aa23.82■■□□□ 1.4
NUP43-205ENST00000463048 TOP1P11387 765 aaKnown RBP23.82■■□□□ 1.4
NUP43-205ENST00000463048 CPA1P15085 419 aa23.82■■□□□ 1.4
NUP43-205ENST00000463048 PPP4R3BQ5MIZ7 849 aa23.82■■□□□ 1.4
NUP43-205ENST00000463048 SLFN13Q68D06 897 aa23.82■■□□□ 1.4
NUP43-205ENST00000463048 ENAHQ8N8S7 591 aaPredicted RBP23.82■■□□□ 1.4
NUP43-205ENST00000463048 SMCR8Q8TEV9 937 aaPredicted RBP23.82■■□□□ 1.4
NUP43-205ENST00000463048 TCEANC2Q96MN5 208 aa23.82■■□□□ 1.4
NUP43-205ENST00000463048 JAKMIP1Q96N16 626 aaKnown RBP23.82■■□□□ 1.4
NUP43-205ENST00000463048 NEK1Q96PY6 1258 aa23.82■■□□□ 1.4
NUP43-205ENST00000463048 PARK7Q99497 189 aaKnown RBP23.82■■□□□ 1.4
NUP43-205ENST00000463048 SAGE1Q9NXZ1 904 aa23.82■■□□□ 1.4
NUP43-205ENST00000463048 CPA4Q9UI42 421 aa23.82■■□□□ 1.4
NUP43-205ENST00000463048 USP17L15C9J2P7 530 aa23.81■■□□□ 1.4
NUP43-205ENST00000463048 USP17L13C9JLJ4 530 aa23.81■■□□□ 1.4
NUP43-205ENST00000463048 USP17L11C9JVI0 530 aa23.81■■□□□ 1.4
NUP43-205ENST00000463048 USP17L18D6R9N7 530 aa23.81■■□□□ 1.4
NUP43-205ENST00000463048 USP17L22D6RA61 530 aa23.81■■□□□ 1.4
NUP43-205ENST00000463048 USP17L17D6RBQ6 530 aa23.81■■□□□ 1.4
NUP43-205ENST00000463048 USP17L19D6RCP7 530 aa23.81■■□□□ 1.4
NUP43-205ENST00000463048 USP17L20D6RJB6 530 aa23.81■■□□□ 1.4
NUP43-205ENST00000463048 USP17L24Q0WX57 530 aa23.81■■□□□ 1.4
NUP43-205ENST00000463048 LPAR1Q92633 364 aa23.81■■□□□ 1.4
NUP43-205ENST00000463048 P2RX7Q99572 595 aaKnown RBP23.81■■□□□ 1.4
NUP43-205ENST00000463048 GPHNQ9NQX3 736 aaPredicted RBP23.81■■□□□ 1.4
NUP43-205ENST00000463048 PNMA3Q9UL41 463 aa23.81■■□□□ 1.4
NUP43-205ENST00000463048 PEX10O60683 326 aa23.8■■□□□ 1.4
NUP43-205ENST00000463048 MCM5P33992 734 aa23.8■■□□□ 1.4
NUP43-205ENST00000463048 KRT32Q14532 448 aa23.8■■□□□ 1.4
NUP43-205ENST00000463048 TMEM67Q5HYA8 995 aa23.8■■□□□ 1.4
NUP43-205ENST00000463048 IFIT1BQ5T764 474 aaKnown RBP23.8■■□□□ 1.4
NUP43-205ENST00000463048 CATSPERGQ6ZRH7 1159 aa23.8■■□□□ 1.4
NUP43-205ENST00000463048 KAT14Q9H8E8 782 aa23.8■■□□□ 1.4
NUP43-205ENST00000463048 SENP2Q9HC62 589 aa23.8■■□□□ 1.4
NUP43-205ENST00000463048 ZCCHC17Q9NP64 241 aaKnown RBP23.8■■□□□ 1.4
NUP43-205ENST00000463048 ERICH2A1L162 156 aa23.79■■□□□ 1.4
NUP43-205ENST00000463048 WDR46O15213 610 aaKnown RBP23.79■■□□□ 1.4
NUP43-205ENST00000463048 HSPA8P11142 646 aaKnown RBP23.79■■□□□ 1.4
NUP43-205ENST00000463048 LBX1P52954 281 aa23.79■■□□□ 1.4
NUP43-205ENST00000463048 CCDC96Q2M329 555 aa23.79■■□□□ 1.4
NUP43-205ENST00000463048 CCDC178Q5BJE1 867 aa23.79■■□□□ 1.4
NUP43-205ENST00000463048 GMCL1P1Q8NEA9 526 aa23.79■■□□□ 1.4
NUP43-205ENST00000463048 KCNB2Q92953 911 aa23.79■■□□□ 1.4
NUP43-205ENST00000463048 TTC14Q96N46 770 aa23.79■■□□□ 1.4
NUP43-205ENST00000463048 FBXO28Q9NVF7 368 aa23.79■■□□□ 1.4
NUP43-205ENST00000463048 SLC45A1Q9Y2W3 748 aa23.79■■□□□ 1.4
NUP43-205ENST00000463048 FLOT1O75955 427 aa23.78■■□□□ 1.4
NUP43-205ENST00000463048 HOXA7P31268 230 aaPredicted RBP23.78■■□□□ 1.4
NUP43-205ENST00000463048 NOVP48745 357 aa23.78■■□□□ 1.4
NUP43-205ENST00000463048 NT5C2P49902 561 aa23.78■■□□□ 1.4
NUP43-205ENST00000463048 WTAPQ15007 396 aa23.78■■□□□ 1.4
NUP43-205ENST00000463048 SART3Q15020 963 aaKnown RBP23.78■■□□□ 1.4
NUP43-205ENST00000463048 SEC23AQ15436 765 aa23.78■■□□□ 1.4
NUP43-205ENST00000463048 TSGA10IPQ3SY00 556 aa23.78■■□□□ 1.4
NUP43-205ENST00000463048 KCTD1Q719H9 257 aa23.78■■□□□ 1.4
NUP43-205ENST00000463048 DGKHQ86XP1 1220 aa23.78■■□□□ 1.4
NUP43-205ENST00000463048 FRMPD2Q68DX3 1309 aaPredicted RBP23.78■■□□□ 1.4
NUP43-205ENST00000463048 EPB41L2O43491 1005 aaKnown RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms