RNA–Protein interactions for RNA: ENST00000462523.5

XPA-202, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 5

Gene XPA, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-202ENST00000462523 MCM5P33992 734 aa22.61■■□□□ 1.21
XPA-202ENST00000462523 TREML2Q5T2D2 321 aa22.61■■□□□ 1.21
XPA-202ENST00000462523 DGKHQ86XP1 1220 aa22.61■■□□□ 1.21
XPA-202ENST00000462523 ANKS1AQ92625 1134 aa22.61■■□□□ 1.21
XPA-202ENST00000462523 TCEANC2Q96MN5 208 aa22.61■■□□□ 1.21
XPA-202ENST00000462523 UBAC1Q9BSL1 405 aa22.61■■□□□ 1.21
XPA-202ENST00000462523 VCPKMTQ9H867 229 aa22.61■■□□□ 1.21
XPA-202ENST00000462523 BTBD19C9JJ37 291 aa22.6■■□□□ 1.21
XPA-202ENST00000462523 ANAPC15P60006 121 aa22.6■■□□□ 1.21
XPA-202ENST00000462523 USP17L2Q6R6M4 530 aa22.6■■□□□ 1.21
XPA-202ENST00000462523 RASGRP2Q7LDG7 609 aa22.6■■□□□ 1.21
XPA-202ENST00000462523 FAM43AQ8N2R8 423 aa22.6■■□□□ 1.21
XPA-202ENST00000462523 PROCA1Q8NCQ7 364 aaPredicted RBP22.6■■□□□ 1.21
XPA-202ENST00000462523 TTC14Q96N46 770 aa22.6■■□□□ 1.21
XPA-202ENST00000462523 LRRC2Q9BYS8 371 aa22.6■■□□□ 1.21
XPA-202ENST00000462523 VCAM1P19320 739 aa22.59■■□□□ 1.21
XPA-202ENST00000462523 CASTP20810 708 aaKnown RBP22.59■■□□□ 1.21
XPA-202ENST00000462523 USP14P54578 494 aa22.59■■□□□ 1.21
XPA-202ENST00000462523 GADL1Q6ZQY3 521 aa22.59■■□□□ 1.21
XPA-202ENST00000462523 DHX32Q7L7V1 743 aaKnown RBP22.59■■□□□ 1.21
XPA-202ENST00000462523 SPICE1Q8N0Z3 855 aa22.59■■□□□ 1.21
XPA-202ENST00000462523 C22orf23Q9BZE7 217 aa22.59■■□□□ 1.21
XPA-202ENST00000462523 SH2D4AQ9H788 454 aa22.59■■□□□ 1.21
XPA-202ENST00000462523 SYNPO2Q9UMS6 1093 aa22.59■■□□□ 1.21
XPA-202ENST00000462523 F5H6K3 240 aa22.59■■□□□ 1.21
XPA-202ENST00000462523 IFIT3O14879 490 aaKnown RBP22.59■■□□□ 1.21
XPA-202ENST00000462523 RBM25P49756 843 aaKnown RBP22.59■■□□□ 1.21
XPA-202ENST00000462523 KLRC3Q07444 240 aa22.59■■□□□ 1.21
XPA-202ENST00000462523 SREBF2Q12772 1141 aa22.59■■□□□ 1.21
XPA-202ENST00000462523 PPP4R3BQ5MIZ7 849 aa22.59■■□□□ 1.21
XPA-202ENST00000462523 FASTKD5Q7L8L6 764 aaKnown RBP22.59■■□□□ 1.21
XPA-202ENST00000462523 IFNL1Q8IU54 200 aa22.59■■□□□ 1.21
XPA-202ENST00000462523 GMCL1P1Q8NEA9 526 aa22.59■■□□□ 1.21
XPA-202ENST00000462523 KIF2CQ99661 725 aa22.59■■□□□ 1.21
XPA-202ENST00000462523 LY9Q9HBG7 655 aa22.59■■□□□ 1.21
XPA-202ENST00000462523 ZSWIM6Q9HCJ5 1215 aa22.59■■□□□ 1.21
XPA-202ENST00000462523 SH2B2O14492 632 aaPredicted RBP22.58■■□□□ 1.2
XPA-202ENST00000462523 NDUFB10O96000 172 aa22.58■■□□□ 1.2
XPA-202ENST00000462523 TOP1P11387 765 aaKnown RBP22.58■■□□□ 1.2
XPA-202ENST00000462523 INHBEP58166 350 aa22.58■■□□□ 1.2
XPA-202ENST00000462523 BLOC1S2Q6QNY1 142 aa22.58■■□□□ 1.2
XPA-202ENST00000462523 TM6SF1Q9BZW5 370 aa22.58■■□□□ 1.2
XPA-202ENST00000462523 AGTPBP1Q9UPW5 1226 aa22.58■■□□□ 1.2
XPA-202ENST00000462523 PARP14Q460N5 1801 aa22.58■■□□□ 1.2
XPA-202ENST00000462523 WDR19Q8NEZ3 1342 aa22.57■■□□□ 1.2
XPA-202ENST00000462523 HMGB1P09429 215 aaKnown RBP22.57■■□□□ 1.2
XPA-202ENST00000462523 RPS6KB1P23443 525 aa22.57■■□□□ 1.2
XPA-202ENST00000462523 CCDC178Q5BJE1 867 aa22.57■■□□□ 1.2
XPA-202ENST00000462523 TMEM67Q5HYA8 995 aa22.57■■□□□ 1.2
XPA-202ENST00000462523 ANKRD23Q86SG2 305 aa22.57■■□□□ 1.2
XPA-202ENST00000462523 MTA3Q9BTC8 594 aa22.57■■□□□ 1.2
XPA-202ENST00000462523 UPF3BQ9BZI7 483 aaKnown RBP22.57■■□□□ 1.2
XPA-202ENST00000462523 GOPCQ9HD26 462 aa22.57■■□□□ 1.2
XPA-202ENST00000462523 TMOD4Q9NZQ9 345 aa22.57■■□□□ 1.2
XPA-202ENST00000462523 RLFQ13129 1914 aa22.57■■□□□ 1.2
XPA-202ENST00000462523 PSMA5P28066 241 aa22.56■■□□□ 1.2
XPA-202ENST00000462523 IFIT1BQ5T764 474 aaKnown RBP22.56■■□□□ 1.2
XPA-202ENST00000462523 RUFY3Q7L099 469 aa22.56■■□□□ 1.2
XPA-202ENST00000462523 LPAR1Q92633 364 aa22.56■■□□□ 1.2
XPA-202ENST00000462523 TMEM87BQ96K49 555 aa22.56■■□□□ 1.2
XPA-202ENST00000462523 NUP88Q99567 741 aaPredicted RBP22.56■■□□□ 1.2
XPA-202ENST00000462523 WTAPQ15007 396 aa22.55■■□□□ 1.2
XPA-202ENST00000462523 SART3Q15020 963 aaKnown RBP22.55■■□□□ 1.2
XPA-202ENST00000462523 REM2Q8IYK8 340 aaPredicted RBP22.55■■□□□ 1.2
XPA-202ENST00000462523 PNMA1Q8ND90 353 aa22.55■■□□□ 1.2
XPA-202ENST00000462523 CHMP4CQ96CF2 233 aa22.55■■□□□ 1.2
XPA-202ENST00000462523 TBC1D32Q96NH3 1257 aa22.55■■□□□ 1.2
XPA-202ENST00000462523 PDHXO00330 501 aa22.55■■□□□ 1.2
XPA-202ENST00000462523 RAD21O60216 631 aa22.55■■□□□ 1.2
XPA-202ENST00000462523 RPAP3Q9H6T3 665 aaPredicted RBP22.55■■□□□ 1.2
XPA-202ENST00000462523 KAT14Q9H8E8 782 aa22.55■■□□□ 1.2
XPA-202ENST00000462523 ERICH2A1L162 156 aa22.54■■□□□ 1.2
XPA-202ENST00000462523 HOXA7P31268 230 aaPredicted RBP22.54■■□□□ 1.2
XPA-202ENST00000462523 FAM83BQ5T0W9 1011 aa22.54■■□□□ 1.2
XPA-202ENST00000462523 SLFN13Q68D06 897 aa22.54■■□□□ 1.2
XPA-202ENST00000462523 JMYQ8N9B5 988 aa22.54■■□□□ 1.2
XPA-202ENST00000462523 MTMR7Q9Y216 660 aa22.54■■□□□ 1.2
XPA-202ENST00000462523 WDR46O15213 610 aaKnown RBP22.53■■□□□ 1.2
XPA-202ENST00000462523 SNHG28P0DPA3 235 aa22.53■■□□□ 1.2
XPA-202ENST00000462523 PDHBP11177 359 aa22.53■■□□□ 1.2
XPA-202ENST00000462523 LIFRP42702 1097 aa22.53■■□□□ 1.2
XPA-202ENST00000462523 GMCL1Q96IK5 515 aa22.53■■□□□ 1.2
XPA-202ENST00000462523 UPF2Q9HAU5 1272 aaKnown RBP22.53■■□□□ 1.2
XPA-202ENST00000462523 SLC45A1Q9Y2W3 748 aa22.53■■□□□ 1.2
XPA-202ENST00000462523 CYP46A1Q9Y6A2 500 aa22.53■■□□□ 1.2
XPA-202ENST00000462523 CATSPERGQ6ZRH7 1159 aa22.52■■□□□ 1.2
XPA-202ENST00000462523 Q6ZUG5 572 aa22.52■■□□□ 1.2
XPA-202ENST00000462523 SGMS1Q86VZ5 419 aa22.52■■□□□ 1.2
XPA-202ENST00000462523 FBXL16Q8N461 479 aa22.52■■□□□ 1.2
XPA-202ENST00000462523 AGXT2Q9BYV1 514 aa22.52■■□□□ 1.2
XPA-202ENST00000462523 ZCCHC17Q9NP64 241 aaKnown RBP22.52■■□□□ 1.2
XPA-202ENST00000462523 CYP2C8P10632 490 aa22.51■■□□□ 1.19
XPA-202ENST00000462523 POTEEQ6S8J3 1075 aa22.51■■□□□ 1.19
XPA-202ENST00000462523 ASCC2Q9H1I8 757 aaPredicted RBP22.51■■□□□ 1.19
XPA-202ENST00000462523 RNF186Q9NXI6 227 aa22.51■■□□□ 1.19
XPA-202ENST00000462523 USP17L15C9J2P7 530 aa22.5■■□□□ 1.19
XPA-202ENST00000462523 USP17L13C9JLJ4 530 aa22.5■■□□□ 1.19
XPA-202ENST00000462523 USP17L11C9JVI0 530 aa22.5■■□□□ 1.19
XPA-202ENST00000462523 USP17L18D6R9N7 530 aa22.5■■□□□ 1.19
XPA-202ENST00000462523 USP17L22D6RA61 530 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms