RNA–Protein interactions for RNA: ENST00000461620.1

SLC48A1-203, Transcript of solute carrier family 48 member 1, humanhuman

TSL 4

Gene SLC48A1, Length 459 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-203ENST00000461620 IGF2BP3O00425 579 aaKnown RBP eCLIP18.65■□□□□ 0.58
SLC48A1-203ENST00000461620 TOP1P11387 765 aaKnown RBP18.65■□□□□ 0.58
SLC48A1-203ENST00000461620 GPAT2Q6NUI2 795 aa18.65■□□□□ 0.58
SLC48A1-203ENST00000461620 GMCL1P1Q8NEA9 526 aa18.65■□□□□ 0.58
SLC48A1-203ENST00000461620 PARK7Q99497 189 aaKnown RBP18.65■□□□□ 0.58
SLC48A1-203ENST00000461620 IL17RBQ9NRM6 502 aa18.65■□□□□ 0.58
SLC48A1-203ENST00000461620 ATAD5Q96QE3 1844 aa18.65■□□□□ 0.58
SLC48A1-203ENST00000461620 MYH8P13535 1937 aa18.64■□□□□ 0.58
SLC48A1-203ENST00000461620 USP17L15C9J2P7 530 aa18.64■□□□□ 0.57
SLC48A1-203ENST00000461620 USP17L13C9JLJ4 530 aa18.64■□□□□ 0.57
SLC48A1-203ENST00000461620 USP17L11C9JVI0 530 aa18.64■□□□□ 0.57
SLC48A1-203ENST00000461620 USP17L18D6R9N7 530 aa18.64■□□□□ 0.57
SLC48A1-203ENST00000461620 USP17L22D6RA61 530 aa18.64■□□□□ 0.57
SLC48A1-203ENST00000461620 USP17L17D6RBQ6 530 aa18.64■□□□□ 0.57
SLC48A1-203ENST00000461620 USP17L19D6RCP7 530 aa18.64■□□□□ 0.57
SLC48A1-203ENST00000461620 USP17L20D6RJB6 530 aa18.64■□□□□ 0.57
SLC48A1-203ENST00000461620 WDR46O15213 610 aaKnown RBP18.64■□□□□ 0.57
SLC48A1-203ENST00000461620 PSMA5P28066 241 aa18.64■□□□□ 0.57
SLC48A1-203ENST00000461620 MCM5P33992 734 aa18.64■□□□□ 0.57
SLC48A1-203ENST00000461620 USP17L24Q0WX57 530 aa18.64■□□□□ 0.57
SLC48A1-203ENST00000461620 TAF1CQ15572 869 aaPredicted RBP18.64■□□□□ 0.57
SLC48A1-203ENST00000461620 FAM43AQ8N2R8 423 aa18.64■□□□□ 0.57
SLC48A1-203ENST00000461620 TMTC2Q8N394 836 aa18.64■□□□□ 0.57
SLC48A1-203ENST00000461620 ZSCAN10Q96SZ4 725 aaPredicted RBP18.64■□□□□ 0.57
SLC48A1-203ENST00000461620 WDR19Q8NEZ3 1342 aa18.64■□□□□ 0.57
SLC48A1-203ENST00000461620 RCSD1Q6JBY9 416 aa18.63■□□□□ 0.57
SLC48A1-203ENST00000461620 TMEM87BQ96K49 555 aa18.63■□□□□ 0.57
SLC48A1-203ENST00000461620 NEK1Q96PY6 1258 aa18.63■□□□□ 0.57
SLC48A1-203ENST00000461620 PHIPQ8WWQ0 1821 aa18.63■□□□□ 0.57
SLC48A1-203ENST00000461620 F5H6K3 240 aa18.62■□□□□ 0.57
SLC48A1-203ENST00000461620 TRPA1O75762 1119 aa18.62■□□□□ 0.57
SLC48A1-203ENST00000461620 VCAM1P19320 739 aa18.62■□□□□ 0.57
SLC48A1-203ENST00000461620 GCLCP48506 637 aaPredicted RBP18.62■□□□□ 0.57
SLC48A1-203ENST00000461620 ANAPC15P60006 121 aa18.62■□□□□ 0.57
SLC48A1-203ENST00000461620 IRX3P78415 501 aaPredicted RBP18.62■□□□□ 0.57
SLC48A1-203ENST00000461620 KLRC3Q07444 240 aa18.62■□□□□ 0.57
SLC48A1-203ENST00000461620 ZYXQ15942 572 aaKnown RBP18.62■□□□□ 0.57
SLC48A1-203ENST00000461620 GMCL1Q96IK5 515 aa18.62■□□□□ 0.57
SLC48A1-203ENST00000461620 HOXC10Q9NYD6 342 aa18.62■□□□□ 0.57
SLC48A1-203ENST00000461620 MYPNQ86TC9 1320 aa18.62■□□□□ 0.57
SLC48A1-203ENST00000461620 GREB1LQ9C091 1923 aaPredicted RBP18.62■□□□□ 0.57
SLC48A1-203ENST00000461620 TLR2O60603 784 aa18.61■□□□□ 0.57
SLC48A1-203ENST00000461620 CTCFP49711 727 aaPredicted RBP18.61■□□□□ 0.57
SLC48A1-203ENST00000461620 CATSPERGQ6ZRH7 1159 aa18.61■□□□□ 0.57
SLC48A1-203ENST00000461620 STOX1Q6ZVD7 989 aa18.61■□□□□ 0.57
SLC48A1-203ENST00000461620 CLEC10AQ8IUN9 316 aa18.61■□□□□ 0.57
SLC48A1-203ENST00000461620 MB21D2Q8IYB1 491 aaPredicted RBP18.61■□□□□ 0.57
SLC48A1-203ENST00000461620 TMEM47Q9BQJ4 181 aa18.61■□□□□ 0.57
SLC48A1-203ENST00000461620 KAT14Q9H8E8 782 aa18.61■□□□□ 0.57
SLC48A1-203ENST00000461620 TNKSO95271 1327 aa18.6■□□□□ 0.57
SLC48A1-203ENST00000461620 IFIT3O14879 490 aaKnown RBP18.6■□□□□ 0.57
SLC48A1-203ENST00000461620 C8orf34Q49A92 452 aa18.6■□□□□ 0.57
SLC48A1-203ENST00000461620 TREML2Q5T2D2 321 aa18.6■□□□□ 0.57
SLC48A1-203ENST00000461620 IFIT1BQ5T764 474 aaKnown RBP18.6■□□□□ 0.57
SLC48A1-203ENST00000461620 LBX2Q6XYB7 198 aa18.6■□□□□ 0.57
SLC48A1-203ENST00000461620 DHX32Q7L7V1 743 aaKnown RBP18.6■□□□□ 0.57
SLC48A1-203ENST00000461620 SMCR8Q8TEV9 937 aaPredicted RBP18.6■□□□□ 0.57
SLC48A1-203ENST00000461620 DCAF4Q8WV16 495 aa18.6■□□□□ 0.57
SLC48A1-203ENST00000461620 TM6SF1Q9BZW5 370 aa18.6■□□□□ 0.57
SLC48A1-203ENST00000461620 RPAP3Q9H6T3 665 aaPredicted RBP18.6■□□□□ 0.57
SLC48A1-203ENST00000461620 UPF2Q9HAU5 1272 aaKnown RBP18.6■□□□□ 0.57
SLC48A1-203ENST00000461620 NMT2O60551 498 aa18.59■□□□□ 0.57
SLC48A1-203ENST00000461620 PLA2G6O60733 806 aa18.59■□□□□ 0.57
SLC48A1-203ENST00000461620 NDUFB10O96000 172 aa18.59■□□□□ 0.57
SLC48A1-203ENST00000461620 HSPA1AP0DMV8 641 aaKnown RBP18.59■□□□□ 0.57
SLC48A1-203ENST00000461620 HSPA1BP0DMV9 641 aaKnown RBP18.59■□□□□ 0.57
SLC48A1-203ENST00000461620 FDX1P10109 184 aa18.59■□□□□ 0.57
SLC48A1-203ENST00000461620 LIFRP42702 1097 aa18.59■□□□□ 0.57
SLC48A1-203ENST00000461620 COG2Q14746 738 aa18.59■□□□□ 0.57
SLC48A1-203ENST00000461620 WTAPQ15007 396 aa18.59■□□□□ 0.57
SLC48A1-203ENST00000461620 ARHGEF6Q15052 776 aa18.59■□□□□ 0.57
SLC48A1-203ENST00000461620 SLFN13Q68D06 897 aa18.59■□□□□ 0.57
SLC48A1-203ENST00000461620 RASEFQ8IZ41 740 aa18.59■□□□□ 0.57
SLC48A1-203ENST00000461620 ENAHQ8N8S7 591 aaPredicted RBP18.59■□□□□ 0.57
SLC48A1-203ENST00000461620 IL27Q8NEV9 243 aa18.59■□□□□ 0.57
SLC48A1-203ENST00000461620 ASCC2Q9H1I8 757 aaPredicted RBP18.59■□□□□ 0.57
SLC48A1-203ENST00000461620 SNX14Q9Y5W7 946 aa18.59■□□□□ 0.57
SLC48A1-203ENST00000461620 CEP350Q5VT06 3117 aa18.58■□□□□ 0.57
SLC48A1-203ENST00000461620 PRC1O43663 620 aa18.58■□□□□ 0.56
SLC48A1-203ENST00000461620 SLC1A4P43007 532 aa18.58■□□□□ 0.56
SLC48A1-203ENST00000461620 CRHR2Q13324 411 aa18.58■□□□□ 0.56
SLC48A1-203ENST00000461620 SEC23AQ15436 765 aa18.58■□□□□ 0.56
SLC48A1-203ENST00000461620 CYB5R4Q7L1T6 521 aa18.58■□□□□ 0.56
SLC48A1-203ENST00000461620 FAM160B2Q86V87 743 aa18.58■□□□□ 0.56
SLC48A1-203ENST00000461620 LRRC47Q8N1G4 583 aaKnown RBP18.58■□□□□ 0.56
SLC48A1-203ENST00000461620 MB21D1Q8N884 522 aa18.58■□□□□ 0.56
SLC48A1-203ENST00000461620 CHURC1Q8WUH1 139 aa18.58■□□□□ 0.56
SLC48A1-203ENST00000461620 FEM1BQ9UK73 627 aa18.58■□□□□ 0.56
SLC48A1-203ENST00000461620 TAF6LQ9Y6J9 622 aa18.58■□□□□ 0.56
SLC48A1-203ENST00000461620 RAD21O60216 631 aa18.57■□□□□ 0.56
SLC48A1-203ENST00000461620 BMP3P12645 472 aa18.57■□□□□ 0.56
SLC48A1-203ENST00000461620 TMEM67Q5HYA8 995 aa18.57■□□□□ 0.56
SLC48A1-203ENST00000461620 GPATCH4Q5T3I0 446 aaKnown RBP18.57■□□□□ 0.56
SLC48A1-203ENST00000461620 BLOC1S2Q6QNY1 142 aa18.57■□□□□ 0.56
SLC48A1-203ENST00000461620 SPICE1Q8N0Z3 855 aa18.57■□□□□ 0.56
SLC48A1-203ENST00000461620 FBXL16Q8N461 479 aa18.57■□□□□ 0.56
SLC48A1-203ENST00000461620 PNMA1Q8ND90 353 aa18.57■□□□□ 0.56
SLC48A1-203ENST00000461620 IGDCC4Q8TDY8 1250 aa18.57■□□□□ 0.56
SLC48A1-203ENST00000461620 IL17RAQ96F46 866 aa18.57■□□□□ 0.56
SLC48A1-203ENST00000461620 ZKSCAN3Q9BRR0 538 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms