RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 LRFN4Q6PJG9 635 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 LRP10Q7Z4F1 713 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 REC114Q7Z4M0 266 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 PI4K2BQ8TCG2 481 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 SH3TC2Q8TF17 1288 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 ASIC4Q96FT7 647 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 PLPPR2Q96GM1 343 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 CRBNQ96SW2 442 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 KRTAP4-5Q9BYR2 181 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 FOXQ1Q9C009 403 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 WNT10AQ9GZT5 417 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 KANSL2Q9H9L4 492 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 ST7Q9NRC1 585 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 TPX2Q9ULW0 747 aaKnown RBP4.22□□□□□ -1.73
HPS3-203ENST00000460822 MSRB2Q9Y3D2 182 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 SNX11Q9Y5W9 270 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 ROBO2Q9HCK4 1378 aa4.21□□□□□ -1.73
HPS3-203ENST00000460822 IGF2BP3O00425 579 aaKnown RBP eCLIP4.21□□□□□ -1.74
HPS3-203ENST00000460822 GIPRP48546 466 aa4.21□□□□□ -1.74
HPS3-203ENST00000460822 OXCT1P55809 520 aa4.21□□□□□ -1.74
HPS3-203ENST00000460822 IGBP1P78318 339 aa4.21□□□□□ -1.74
HPS3-203ENST00000460822 INPP5AQ14642 412 aa4.21□□□□□ -1.74
HPS3-203ENST00000460822 OGFOD2Q6N063 350 aa4.21□□□□□ -1.74
HPS3-203ENST00000460822 ZNF574Q6ZN55 896 aaPredicted RBP4.21□□□□□ -1.74
HPS3-203ENST00000460822 GK5Q6ZS86 529 aa4.21□□□□□ -1.74
HPS3-203ENST00000460822 ARMCX6Q7L4S7 300 aa4.21□□□□□ -1.74
HPS3-203ENST00000460822 CCDC84Q86UT8 332 aaPredicted RBP4.21□□□□□ -1.74
HPS3-203ENST00000460822 HID1Q8IV36 788 aa4.21□□□□□ -1.74
HPS3-203ENST00000460822 DNAJC7Q99615 494 aa4.21□□□□□ -1.74
HPS3-203ENST00000460822 PRDM5Q9NQX1 630 aaPredicted RBP4.21□□□□□ -1.74
HPS3-203ENST00000460822 FANCLQ9NW38 375 aa4.21□□□□□ -1.74
HPS3-203ENST00000460822 ACTR10Q9NZ32 417 aa4.21□□□□□ -1.74
HPS3-203ENST00000460822 MAPK8IP1Q9UQF2 711 aa4.21□□□□□ -1.74
HPS3-203ENST00000460822 CDC45O75419 566 aa4.2□□□□□ -1.74
HPS3-203ENST00000460822 C8AP07357 584 aa4.2□□□□□ -1.74
HPS3-203ENST00000460822 JUNBP17275 347 aaPredicted RBP4.2□□□□□ -1.74
HPS3-203ENST00000460822 IBSPP21815 317 aaPredicted RBP4.2□□□□□ -1.74
HPS3-203ENST00000460822 ZNF165P49910 485 aa4.2□□□□□ -1.74
HPS3-203ENST00000460822 RING1Q06587 406 aa4.2□□□□□ -1.74
HPS3-203ENST00000460822 LCE4AQ5TA78 99 aa4.2□□□□□ -1.74
HPS3-203ENST00000460822 ANGEL2Q5VTE6 544 aaKnown RBP4.2□□□□□ -1.74
HPS3-203ENST00000460822 CYFIP1Q7L576 1253 aa4.2□□□□□ -1.74
HPS3-203ENST00000460822 FILIP1Q7Z7B0 1213 aa4.2□□□□□ -1.74
HPS3-203ENST00000460822 MFSD2AQ8NA29 543 aa4.2□□□□□ -1.74
HPS3-203ENST00000460822 ASB11Q8WXH4 323 aa4.2□□□□□ -1.74
HPS3-203ENST00000460822 MIPEPQ99797 713 aa4.2□□□□□ -1.74
HPS3-203ENST00000460822 CWC22Q9HCG8 908 aaKnown RBP4.2□□□□□ -1.74
HPS3-203ENST00000460822 BRMS1Q9HCU9 246 aa4.2□□□□□ -1.74
HPS3-203ENST00000460822 IFT57Q9NWB7 429 aa4.2□□□□□ -1.74
HPS3-203ENST00000460822 FAM155AB1AL88 458 aaPredicted RBP4.2□□□□□ -1.74
HPS3-203ENST00000460822 CILPO75339 1184 aa4.2□□□□□ -1.74
HPS3-203ENST00000460822 BPNT1O95861 308 aa4.2□□□□□ -1.74
HPS3-203ENST00000460822 CD8BP10966 210 aa4.2□□□□□ -1.74
HPS3-203ENST00000460822 ANAPC15P60006 121 aa4.2□□□□□ -1.74
HPS3-203ENST00000460822 CLCQ05315 142 aa4.2□□□□□ -1.74
HPS3-203ENST00000460822 PTPN11Q06124 597 aaPredicted RBP4.2□□□□□ -1.74
HPS3-203ENST00000460822 PDE4BQ07343 736 aa4.2□□□□□ -1.74
HPS3-203ENST00000460822 PLEKHG4Q58EX7 1191 aa4.2□□□□□ -1.74
HPS3-203ENST00000460822 LARP1BQ659C4 914 aaKnown RBP4.2□□□□□ -1.74
HPS3-203ENST00000460822 SPRED2Q7Z698 418 aa4.2□□□□□ -1.74
HPS3-203ENST00000460822 LILRB2Q8N423 598 aa4.2□□□□□ -1.74
HPS3-203ENST00000460822 MICAL1Q8TDZ2 1067 aa4.2□□□□□ -1.74
HPS3-203ENST00000460822 GAL3ST3Q96A11 431 aa4.2□□□□□ -1.74
HPS3-203ENST00000460822 CCDC113Q9H0I3 377 aa4.2□□□□□ -1.74
HPS3-203ENST00000460822 TNKS2Q9H2K2 1166 aa4.2□□□□□ -1.74
HPS3-203ENST00000460822 ZNRF3Q9ULT6 936 aa4.2□□□□□ -1.74
HPS3-203ENST00000460822 NOP58Q9Y2X3 529 aaKnown RBP4.2□□□□□ -1.74
HPS3-203ENST00000460822 COL4A3BPQ9Y5P4 624 aa4.2□□□□□ -1.74
HPS3-203ENST00000460822 PDPK1O15530 556 aa4.19□□□□□ -1.74
HPS3-203ENST00000460822 FUT4P22083 530 aa4.19□□□□□ -1.74
HPS3-203ENST00000460822 CYP7A1P22680 504 aa4.19□□□□□ -1.74
HPS3-203ENST00000460822 GRK4P32298 578 aa4.19□□□□□ -1.74
HPS3-203ENST00000460822 NTF4P34130 210 aa4.19□□□□□ -1.74
HPS3-203ENST00000460822 IFRD2Q12894 506 aaPredicted RBP4.19□□□□□ -1.74
HPS3-203ENST00000460822 IKZF1Q13422 519 aa4.19□□□□□ -1.74
HPS3-203ENST00000460822 ZNF792Q3KQV3 632 aa4.19□□□□□ -1.74
HPS3-203ENST00000460822 SFRP5Q5T4F7 317 aa4.19□□□□□ -1.74
HPS3-203ENST00000460822 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.19□□□□□ -1.74
HPS3-203ENST00000460822 NFXL1Q6ZNB6 911 aa4.19□□□□□ -1.74
HPS3-203ENST00000460822 UBE3DQ7Z6J8 389 aa4.19□□□□□ -1.74
HPS3-203ENST00000460822 LSRQ86X29 649 aaPredicted RBP4.19□□□□□ -1.74
HPS3-203ENST00000460822 REXO1Q8N1G1 1221 aaKnown RBP4.19□□□□□ -1.74
HPS3-203ENST00000460822 ZCRB1Q8TBF4 217 aaKnown RBP4.19□□□□□ -1.74
HPS3-203ENST00000460822 APPBP2Q92624 585 aa4.19□□□□□ -1.74
HPS3-203ENST00000460822 HEXIM2Q96MH2 286 aaKnown RBP4.19□□□□□ -1.74
HPS3-203ENST00000460822 RC3H2Q9HBD1 1191 aaKnown RBP4.19□□□□□ -1.74
HPS3-203ENST00000460822 TACC3Q9Y6A5 838 aa4.19□□□□□ -1.74
HPS3-203ENST00000460822 ESYT3A0FGR9 886 aa4.18□□□□□ -1.74
HPS3-203ENST00000460822 PGRP06401 933 aa4.18□□□□□ -1.74
HPS3-203ENST00000460822 PPP2R5EQ16537 467 aa4.18□□□□□ -1.74
HPS3-203ENST00000460822 CBLL1Q75N03 491 aa4.18□□□□□ -1.74
HPS3-203ENST00000460822 OR6P1Q8NGX9 317 aa4.18□□□□□ -1.74
HPS3-203ENST00000460822 SPC25Q9HBM1 224 aa4.18□□□□□ -1.74
HPS3-203ENST00000460822 PLAGL2Q9UPG8 496 aa4.18□□□□□ -1.74
HPS3-203ENST00000460822 GRIN3BO60391 1043 aa4.18□□□□□ -1.74
HPS3-203ENST00000460822 DNAJC6O75061 913 aa4.18□□□□□ -1.74
HPS3-203ENST00000460822 IMPDH2P12268 514 aa4.18□□□□□ -1.74
HPS3-203ENST00000460822 CLCN7P51798 805 aa4.18□□□□□ -1.74
HPS3-203ENST00000460822 RASGRF1Q13972 1273 aa4.18□□□□□ -1.74
HPS3-203ENST00000460822 FXNQ16595 210 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms