RNA–Protein interactions for RNA: ENST00000460176.6

GARNL3-211, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-211ENST00000460176 SPP2Q13103 211 aa12.05□□□□□ -0.48
GARNL3-211ENST00000460176 RUFY3Q7L099 469 aa12.05□□□□□ -0.48
GARNL3-211ENST00000460176 DGKHQ86XP1 1220 aa12.05□□□□□ -0.48
GARNL3-211ENST00000460176 IGDCC4Q8TDY8 1250 aa12.05□□□□□ -0.48
GARNL3-211ENST00000460176 ANKS1AQ92625 1134 aa12.05□□□□□ -0.48
GARNL3-211ENST00000460176 MKL1Q969V6 931 aa12.05□□□□□ -0.48
GARNL3-211ENST00000460176 TCEANC2Q96MN5 208 aa12.05□□□□□ -0.48
GARNL3-211ENST00000460176 UBAC1Q9BSL1 405 aa12.05□□□□□ -0.48
GARNL3-211ENST00000460176 MTA3Q9BTC8 594 aa12.05□□□□□ -0.48
GARNL3-211ENST00000460176 UPF3BQ9BZI7 483 aaKnown RBP12.05□□□□□ -0.48
GARNL3-211ENST00000460176 KIAA1683Q9H0B3 1180 aa12.05□□□□□ -0.48
GARNL3-211ENST00000460176 SENP2Q9HC62 589 aa12.05□□□□□ -0.48
GARNL3-211ENST00000460176 ARHGEF10LQ9HCE6 1279 aa12.05□□□□□ -0.48
GARNL3-211ENST00000460176 GPHNQ9NQX3 736 aaPredicted RBP12.05□□□□□ -0.48
GARNL3-211ENST00000460176 CLIP2Q9UDT6 1046 aa12.05□□□□□ -0.48
GARNL3-211ENST00000460176 KCNH4Q9UQ05 1017 aa12.05□□□□□ -0.48
GARNL3-211ENST00000460176 TMX2Q9Y320 296 aa12.05□□□□□ -0.48
GARNL3-211ENST00000460176 PARP14Q460N5 1801 aa12.04□□□□□ -0.48
GARNL3-211ENST00000460176 TRIM75PA6NK02 468 aa12.04□□□□□ -0.48
GARNL3-211ENST00000460176 STK25O00506 426 aa12.04□□□□□ -0.48
GARNL3-211ENST00000460176 SH2B2O14492 632 aaPredicted RBP12.04□□□□□ -0.48
GARNL3-211ENST00000460176 IFIT3O14879 490 aaKnown RBP12.04□□□□□ -0.48
GARNL3-211ENST00000460176 BACE1P56817 501 aa12.04□□□□□ -0.48
GARNL3-211ENST00000460176 ATP2B2Q01814 1243 aa12.04□□□□□ -0.48
GARNL3-211ENST00000460176 DEFB115Q30KQ5 88 aa12.04□□□□□ -0.48
GARNL3-211ENST00000460176 CCDC178Q5BJE1 867 aa12.04□□□□□ -0.48
GARNL3-211ENST00000460176 TMEM67Q5HYA8 995 aa12.04□□□□□ -0.48
GARNL3-211ENST00000460176 PPP4R3BQ5MIZ7 849 aa12.04□□□□□ -0.48
GARNL3-211ENST00000460176 CYP4F22Q6NT55 531 aa12.04□□□□□ -0.48
GARNL3-211ENST00000460176 LRRC47Q8N1G4 583 aaKnown RBP12.04□□□□□ -0.48
GARNL3-211ENST00000460176 CCDC102AQ96A19 550 aa12.04□□□□□ -0.48
GARNL3-211ENST00000460176 TMEM87BQ96K49 555 aa12.04□□□□□ -0.48
GARNL3-211ENST00000460176 TTC14Q96N46 770 aa12.04□□□□□ -0.48
GARNL3-211ENST00000460176 TMEM47Q9BQJ4 181 aa12.04□□□□□ -0.48
GARNL3-211ENST00000460176 LRRC2Q9BYS8 371 aa12.04□□□□□ -0.48
GARNL3-211ENST00000460176 LY9Q9HBG7 655 aa12.04□□□□□ -0.48
GARNL3-211ENST00000460176 SYNPO2Q9UMS6 1093 aa12.04□□□□□ -0.48
GARNL3-211ENST00000460176 STX8Q9UNK0 236 aa12.04□□□□□ -0.48
GARNL3-211ENST00000460176 CYP46A1Q9Y6A2 500 aa12.04□□□□□ -0.48
GARNL3-211ENST00000460176 USP17L10C9JJH3 530 aa12.03□□□□□ -0.48
GARNL3-211ENST00000460176 CXCL11O14625 94 aa12.03□□□□□ -0.48
GARNL3-211ENST00000460176 TOP1P11387 765 aaKnown RBP12.03□□□□□ -0.48
GARNL3-211ENST00000460176 MKRN3Q13064 507 aaKnown RBP12.03□□□□□ -0.48
GARNL3-211ENST00000460176 DGKZQ13574 1117 aa12.03□□□□□ -0.48
GARNL3-211ENST00000460176 MTMR2Q13614 643 aa12.03□□□□□ -0.48
GARNL3-211ENST00000460176 MOGSQ13724 837 aa12.03□□□□□ -0.48
GARNL3-211ENST00000460176 WTAPQ15007 396 aa12.03□□□□□ -0.48
GARNL3-211ENST00000460176 ZYXQ15942 572 aaKnown RBP12.03□□□□□ -0.48
GARNL3-211ENST00000460176 SH3D19Q5HYK7 790 aa12.03□□□□□ -0.48
GARNL3-211ENST00000460176 KIAA1755Q5JYT7 1200 aa12.03□□□□□ -0.48
GARNL3-211ENST00000460176 FBXL16Q8N461 479 aa12.03□□□□□ -0.48
GARNL3-211ENST00000460176 MS4A4AQ96JQ5 239 aa12.03□□□□□ -0.48
GARNL3-211ENST00000460176 CAPNS2Q96L46 248 aa12.03□□□□□ -0.48
GARNL3-211ENST00000460176 FEZ1Q99689 392 aa12.03□□□□□ -0.48
GARNL3-211ENST00000460176 SH2D4AQ9H788 454 aa12.03□□□□□ -0.48
GARNL3-211ENST00000460176 RLFQ13129 1914 aa12.02□□□□□ -0.49
GARNL3-211ENST00000460176 A0A0G2JLL6 359 aaPredicted RBP12.02□□□□□ -0.49
GARNL3-211ENST00000460176 ERICH2A1L162 156 aa12.02□□□□□ -0.49
GARNL3-211ENST00000460176 C19orf81C9J6K1 198 aa12.02□□□□□ -0.49
GARNL3-211ENST00000460176 LIFRP42702 1097 aa12.02□□□□□ -0.49
GARNL3-211ENST00000460176 HMGCS2P54868 508 aa12.02□□□□□ -0.49
GARNL3-211ENST00000460176 SNAPC2Q13487 334 aa12.02□□□□□ -0.49
GARNL3-211ENST00000460176 SART3Q15020 963 aaKnown RBP12.02□□□□□ -0.49
GARNL3-211ENST00000460176 IFIT1BQ5T764 474 aaKnown RBP12.02□□□□□ -0.49
GARNL3-211ENST00000460176 USP17L2Q6R6M4 530 aa12.02□□□□□ -0.49
GARNL3-211ENST00000460176 Q6ZUG5 572 aa12.02□□□□□ -0.49
GARNL3-211ENST00000460176 PRRT2Q7Z6L0 340 aaPredicted RBP12.02□□□□□ -0.49
GARNL3-211ENST00000460176 C12orf42Q96LP6 360 aa12.02□□□□□ -0.49
GARNL3-211ENST00000460176 AGXT2Q9BYV1 514 aa12.02□□□□□ -0.49
GARNL3-211ENST00000460176 VCPKMTQ9H867 229 aa12.02□□□□□ -0.49
GARNL3-211ENST00000460176 KAT14Q9H8E8 782 aa12.02□□□□□ -0.49
GARNL3-211ENST00000460176 EMILIN3Q9NT22 766 aa12.02□□□□□ -0.49
GARNL3-211ENST00000460176 TESPA1A2RU30 521 aaPredicted RBP12.01□□□□□ -0.49
GARNL3-211ENST00000460176 F5H6K3 240 aa12.01□□□□□ -0.49
GARNL3-211ENST00000460176 NDUFB10O96000 172 aa12.01□□□□□ -0.49
GARNL3-211ENST00000460176 GTF2A2P52657 109 aa12.01□□□□□ -0.49
GARNL3-211ENST00000460176 KLRC3Q07444 240 aa12.01□□□□□ -0.49
GARNL3-211ENST00000460176 GRM1Q13255 1194 aa12.01□□□□□ -0.49
GARNL3-211ENST00000460176 TOB2Q14106 344 aaPredicted RBP12.01□□□□□ -0.49
GARNL3-211ENST00000460176 RASGRP2Q7LDG7 609 aa12.01□□□□□ -0.49
GARNL3-211ENST00000460176 SGMS1Q86VZ5 419 aa12.01□□□□□ -0.49
GARNL3-211ENST00000460176 PNMA1Q8ND90 353 aa12.01□□□□□ -0.49
GARNL3-211ENST00000460176 GMCL1P1Q8NEA9 526 aa12.01□□□□□ -0.49
GARNL3-211ENST00000460176 BRI3BPQ8WY22 251 aa12.01□□□□□ -0.49
GARNL3-211ENST00000460176 ZIC5Q96T25 663 aa12.01□□□□□ -0.49
GARNL3-211ENST00000460176 ALDH8A1Q9H2A2 487 aaPredicted RBP12.01□□□□□ -0.49
GARNL3-211ENST00000460176 PDRG1Q9NUG6 133 aa12.01□□□□□ -0.49
GARNL3-211ENST00000460176 WDR33Q9C0J8 1336 aaKnown RBP12.01□□□□□ -0.49
GARNL3-211ENST00000460176 A0A0G2JMZ2 1700 aa12□□□□□ -0.49
GARNL3-211ENST00000460176 CCL15-CCL14A0A0B4J2E2 113 aa12□□□□□ -0.49
GARNL3-211ENST00000460176 MANSC4A6NHS7 340 aaPredicted RBP12□□□□□ -0.49
GARNL3-211ENST00000460176 AOC2O75106 756 aa12□□□□□ -0.49
GARNL3-211ENST00000460176 CETPP11597 493 aa12□□□□□ -0.49
GARNL3-211ENST00000460176 VEGFBP49765 207 aa12□□□□□ -0.49
GARNL3-211ENST00000460176 NEK4P51957 841 aa12□□□□□ -0.49
GARNL3-211ENST00000460176 USP14P54578 494 aa12□□□□□ -0.49
GARNL3-211ENST00000460176 KIF23Q02241 960 aaPredicted RBP12□□□□□ -0.49
GARNL3-211ENST00000460176 NOGQ13253 232 aa12□□□□□ -0.49
GARNL3-211ENST00000460176 RABEP1Q15276 862 aa12□□□□□ -0.49
GARNL3-211ENST00000460176 CCL15Q16663 113 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms