RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 TBC1D8BQ0IIM8 1120 aa9.79□□□□□ -0.84
SHROOM4-203ENST00000460112 TBC1D22AQ8WUA7 517 aa9.79□□□□□ -0.84
SHROOM4-203ENST00000460112 TM6SF1Q9BZW5 370 aa9.79□□□□□ -0.84
SHROOM4-203ENST00000460112 ADGRL2O95490 1459 aa9.79□□□□□ -0.84
SHROOM4-203ENST00000460112 YTHDC2Q9H6S0 1430 aaKnown RBP9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 RINT1Q6NUQ1 792 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 RAB20Q9NX57 234 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 IFNKQ9P0W0 207 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 GGA1Q9UJY5 639 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 ATP8B3O60423 1300 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 TRIM4Q9C037 500 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 ZBTB12Q9Y330 459 aaPredicted RBP9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 CHMP2AO43633 222 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 CUTAO60888 179 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 KRT15P19012 456 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 YARSP54577 528 aaKnown RBP9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 SP4Q02446 784 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 CALCRLQ16602 461 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 LETM2Q2VYF4 491 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 CCDC105Q8IYK2 499 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 ASPHQ12797 758 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 RAB44Q7Z6P3 723 aaPredicted RBP9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 WDR62O43379 1518 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 ACEP12821 1306 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 TBC1D8O95759 1140 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 ERCC3P19447 782 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 NFKBIAP25963 317 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 PODNQ7Z5L7 613 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 ZBTB8OSQ8IWT0 167 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 MRPL44Q9H9J2 332 aaKnown RBP9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 ABCC10Q5T3U5 1492 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 ARHGEF37A1IGU5 675 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 GBP5Q96PP8 586 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 TTC1Q99614 292 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 PDE1CQ14123 709 aaPredicted RBP9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 CREB3L3Q68CJ9 461 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 EP400NLQ6ZTU2 488 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 BBS5Q8N3I7 341 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 CSGALNACT2Q8N6G5 542 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 MAGEF1Q9HAY2 307 aa9.78□□□□□ -0.84
SHROOM4-203ENST00000460112 SBNO2Q9Y2G9 1366 aa9.77□□□□□ -0.84
SHROOM4-203ENST00000460112 CCDC93Q567U6 631 aa9.77□□□□□ -0.84
SHROOM4-203ENST00000460112 EXOC8Q8IYI6 725 aa9.77□□□□□ -0.84
SHROOM4-203ENST00000460112 FAM135BQ49AJ0 1406 aa9.77□□□□□ -0.84
SHROOM4-203ENST00000460112 HADHQ16836 314 aaKnown RBP9.77□□□□□ -0.84
SHROOM4-203ENST00000460112 PPP1R12CQ9BZL4 782 aa9.77□□□□□ -0.84
SHROOM4-203ENST00000460112 TRIM35Q9UPQ4 493 aa9.77□□□□□ -0.84
SHROOM4-203ENST00000460112 THAP12O43422 761 aa9.77□□□□□ -0.85
SHROOM4-203ENST00000460112 DNM1Q05193 864 aaKnown RBP9.77□□□□□ -0.85
SHROOM4-203ENST00000460112 GTF3C6Q969F1 213 aa9.77□□□□□ -0.85
SHROOM4-203ENST00000460112 DACT3Q96B18 629 aaPredicted RBP9.77□□□□□ -0.85
SHROOM4-203ENST00000460112 TTC4O95801 387 aa9.77□□□□□ -0.85
SHROOM4-203ENST00000460112 TNNC2P02585 160 aa9.77□□□□□ -0.85
SHROOM4-203ENST00000460112 PTPREP23469 700 aa9.77□□□□□ -0.85
SHROOM4-203ENST00000460112 KPNA2P52292 529 aaKnown RBP9.77□□□□□ -0.85
SHROOM4-203ENST00000460112 JADE1Q6IE81 842 aa9.77□□□□□ -0.85
SHROOM4-203ENST00000460112 PRPF38AQ8NAV1 312 aaKnown RBP9.77□□□□□ -0.85
SHROOM4-203ENST00000460112 CALR3Q96L12 384 aaKnown RBP9.77□□□□□ -0.85
SHROOM4-203ENST00000460112 EPS15L1Q9UBC2 864 aa9.77□□□□□ -0.85
SHROOM4-203ENST00000460112 NSFL1CQ9UNZ2 370 aaKnown RBP9.77□□□□□ -0.85
SHROOM4-203ENST00000460112 BAZ2BQ9UIF8 2168 aaKnown RBP9.77□□□□□ -0.85
SHROOM4-203ENST00000460112 LMBR1LQ6UX01 489 aa9.77□□□□□ -0.85
SHROOM4-203ENST00000460112 PEX26Q7Z412 305 aa9.77□□□□□ -0.85
SHROOM4-203ENST00000460112 IFT122Q9HBG6 1241 aa9.77□□□□□ -0.85
SHROOM4-203ENST00000460112 PFDN1O60925 122 aa9.77□□□□□ -0.85
SHROOM4-203ENST00000460112 UFL1O94874 794 aa9.77□□□□□ -0.85
SHROOM4-203ENST00000460112 MCF2L2Q86YR7 1114 aa9.77□□□□□ -0.85
SHROOM4-203ENST00000460112 NECAB1Q8N987 351 aa9.77□□□□□ -0.85
SHROOM4-203ENST00000460112 RILPQ96NA2 401 aa9.77□□□□□ -0.85
SHROOM4-203ENST00000460112 PSMD6Q15008 389 aa9.77□□□□□ -0.85
SHROOM4-203ENST00000460112 SRRM1Q8IYB3 904 aaKnown RBP9.77□□□□□ -0.85
SHROOM4-203ENST00000460112 SLFN12Q8IYM2 578 aa9.77□□□□□ -0.85
SHROOM4-203ENST00000460112 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.77□□□□□ -0.85
SHROOM4-203ENST00000460112 KAT6AQ92794 2004 aa9.77□□□□□ -0.85
SHROOM4-203ENST00000460112 RPS6KA1Q15418 735 aa9.76□□□□□ -0.85
SHROOM4-203ENST00000460112 HSP90AA5PQ58FG0 334 aa9.76□□□□□ -0.85
SHROOM4-203ENST00000460112 COPS6Q7L5N1 327 aa9.76□□□□□ -0.85
SHROOM4-203ENST00000460112 CDKL2Q92772 493 aa9.76□□□□□ -0.85
SHROOM4-203ENST00000460112 MED10Q9BTT4 135 aa9.76□□□□□ -0.85
SHROOM4-203ENST00000460112 MROH5Q6ZUA9 1318 aa9.76□□□□□ -0.85
SHROOM4-203ENST00000460112 EXOC3O60645 756 aa9.76□□□□□ -0.85
SHROOM4-203ENST00000460112 HEXIM1O94992 359 aaKnown RBP9.76□□□□□ -0.85
SHROOM4-203ENST00000460112 GSTA1P08263 222 aa9.76□□□□□ -0.85
SHROOM4-203ENST00000460112 GSTA2P09210 222 aa9.76□□□□□ -0.85
SHROOM4-203ENST00000460112 SLC1A4P43007 532 aa9.76□□□□□ -0.85
SHROOM4-203ENST00000460112 SOS2Q07890 1332 aaPredicted RBP9.76□□□□□ -0.85
SHROOM4-203ENST00000460112 FAM81BQ96LP2 452 aa9.76□□□□□ -0.85
SHROOM4-203ENST00000460112 ANAPC5Q9UJX4 755 aa9.76□□□□□ -0.85
SHROOM4-203ENST00000460112 RNF123Q5XPI4 1314 aa9.76□□□□□ -0.85
SHROOM4-203ENST00000460112 PCP11498 1178 aaKnown RBP9.76□□□□□ -0.85
SHROOM4-203ENST00000460112 KARSQ15046 597 aaKnown RBP9.76□□□□□ -0.85
SHROOM4-203ENST00000460112 HSP90AA4PQ58FG1 418 aa9.76□□□□□ -0.85
SHROOM4-203ENST00000460112 MIER3Q7Z3K6 550 aa9.76□□□□□ -0.85
SHROOM4-203ENST00000460112 MYCT1Q8N699 235 aa9.76□□□□□ -0.85
SHROOM4-203ENST00000460112 ZC4H2Q9NQZ6 224 aa9.76□□□□□ -0.85
SHROOM4-203ENST00000460112 LMNB2Q03252 620 aa9.76□□□□□ -0.85
SHROOM4-203ENST00000460112 C14orf93Q9H972 538 aaKnown RBP9.76□□□□□ -0.85
SHROOM4-203ENST00000460112 VPS37BQ9H9H4 285 aa9.76□□□□□ -0.85
SHROOM4-203ENST00000460112 HOMER3Q9NSC5 361 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms