RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-223ENST00000459783 TMOD4Q9NZQ9 345 aa12.16□□□□□ -0.46
MRPL55-223ENST00000459783 CLIP2Q9UDT6 1046 aa12.16□□□□□ -0.46
MRPL55-223ENST00000459783 ZSWIM8A7E2V4 1837 aa12.16□□□□□ -0.46
MRPL55-223ENST00000459783 TSPY2A6NKD2 308 aa12.15□□□□□ -0.46
MRPL55-223ENST00000459783 KDM4AO75164 1064 aa12.15□□□□□ -0.46
MRPL55-223ENST00000459783 USP14P54578 494 aa12.15□□□□□ -0.46
MRPL55-223ENST00000459783 NECTIN1Q15223 517 aa12.15□□□□□ -0.46
MRPL55-223ENST00000459783 IMMTQ16891 758 aaKnown RBP12.15□□□□□ -0.46
MRPL55-223ENST00000459783 MFSD6Q6ZSS7 791 aa12.15□□□□□ -0.46
MRPL55-223ENST00000459783 CYB5R4Q7L1T6 521 aa12.15□□□□□ -0.46
MRPL55-223ENST00000459783 MKL1Q969V6 931 aa12.15□□□□□ -0.46
MRPL55-223ENST00000459783 PARK7Q99497 189 aaKnown RBP12.15□□□□□ -0.46
MRPL55-223ENST00000459783 RPAP3Q9H6T3 665 aaPredicted RBP12.15□□□□□ -0.46
MRPL55-223ENST00000459783 ARHGEF10LQ9HCE6 1279 aa12.15□□□□□ -0.46
MRPL55-223ENST00000459783 TXNRD2Q9NNW7 524 aa12.15□□□□□ -0.46
MRPL55-223ENST00000459783 TOMM22Q9NS69 142 aa12.15□□□□□ -0.46
MRPL55-223ENST00000459783 CTNNA3Q9UI47 895 aa12.15□□□□□ -0.46
MRPL55-223ENST00000459783 SLC27A2O14975 620 aa12.14□□□□□ -0.47
MRPL55-223ENST00000459783 FKTNO75072 461 aa12.14□□□□□ -0.47
MRPL55-223ENST00000459783 CNMDO75829 334 aa12.14□□□□□ -0.47
MRPL55-223ENST00000459783 NDUFB10O96000 172 aa12.14□□□□□ -0.47
MRPL55-223ENST00000459783 CATSPERGQ6ZRH7 1159 aa12.14□□□□□ -0.47
MRPL55-223ENST00000459783 CD99L2Q8TCZ2 262 aa12.14□□□□□ -0.47
MRPL55-223ENST00000459783 ZKSCAN3Q9BRR0 538 aa12.14□□□□□ -0.47
MRPL55-223ENST00000459783 TCP11L1Q9NUJ3 509 aa12.14□□□□□ -0.47
MRPL55-223ENST00000459783 FBXO28Q9NVF7 368 aa12.14□□□□□ -0.47
MRPL55-223ENST00000459783 RLFQ13129 1914 aa12.13□□□□□ -0.47
MRPL55-223ENST00000459783 CASP8AP2Q9UKL3 1982 aa12.13□□□□□ -0.47
MRPL55-223ENST00000459783 SPDYE16A6NNV3 312 aaPredicted RBP12.13□□□□□ -0.47
MRPL55-223ENST00000459783 USP17L15C9J2P7 530 aa12.13□□□□□ -0.47
MRPL55-223ENST00000459783 USP17L13C9JLJ4 530 aa12.13□□□□□ -0.47
MRPL55-223ENST00000459783 USP17L11C9JVI0 530 aa12.13□□□□□ -0.47
MRPL55-223ENST00000459783 USP17L18D6R9N7 530 aa12.13□□□□□ -0.47
MRPL55-223ENST00000459783 USP17L22D6RA61 530 aa12.13□□□□□ -0.47
MRPL55-223ENST00000459783 USP17L17D6RBQ6 530 aa12.13□□□□□ -0.47
MRPL55-223ENST00000459783 USP17L19D6RCP7 530 aa12.13□□□□□ -0.47
MRPL55-223ENST00000459783 USP17L20D6RJB6 530 aa12.13□□□□□ -0.47
MRPL55-223ENST00000459783 E7EWF7 191 aa12.13□□□□□ -0.47
MRPL55-223ENST00000459783 F5H6K3 240 aa12.13□□□□□ -0.47
MRPL55-223ENST00000459783 ECM2O94769 699 aaPredicted RBP12.13□□□□□ -0.47
MRPL55-223ENST00000459783 TTLL1O95922 423 aa12.13□□□□□ -0.47
MRPL55-223ENST00000459783 PCP11498 1178 aaKnown RBP12.13□□□□□ -0.47
MRPL55-223ENST00000459783 ANTXR2P58335 489 aa12.13□□□□□ -0.47
MRPL55-223ENST00000459783 HERVK_113P62684 666 aa12.13□□□□□ -0.47
MRPL55-223ENST00000459783 SP3Q02447 781 aa12.13□□□□□ -0.47
MRPL55-223ENST00000459783 KLRC3Q07444 240 aa12.13□□□□□ -0.47
MRPL55-223ENST00000459783 USP17L24Q0WX57 530 aa12.13□□□□□ -0.47
MRPL55-223ENST00000459783 FAM83BQ5T0W9 1011 aa12.13□□□□□ -0.47
MRPL55-223ENST00000459783 CREB3L3Q68CJ9 461 aa12.13□□□□□ -0.47
MRPL55-223ENST00000459783 RASEFQ8IZ41 740 aa12.13□□□□□ -0.47
MRPL55-223ENST00000459783 CHMP4CQ96CF2 233 aa12.13□□□□□ -0.47
MRPL55-223ENST00000459783 RNF41Q9H4P4 317 aaPredicted RBP12.13□□□□□ -0.47
MRPL55-223ENST00000459783 ZSWIM5Q9P217 1185 aa12.13□□□□□ -0.47
MRPL55-223ENST00000459783 RBPJLQ9UBG7 517 aa12.13□□□□□ -0.47
MRPL55-223ENST00000459783 WDR46O15213 610 aaKnown RBP12.12□□□□□ -0.47
MRPL55-223ENST00000459783 OSBPP22059 807 aa12.12□□□□□ -0.47
MRPL55-223ENST00000459783 IRX3P78415 501 aaPredicted RBP12.12□□□□□ -0.47
MRPL55-223ENST00000459783 LACTBP83111 547 aaPredicted RBP12.12□□□□□ -0.47
MRPL55-223ENST00000459783 KIAA1211Q6ZU35 1233 aa12.12□□□□□ -0.47
MRPL55-223ENST00000459783 MB21D2Q8IYB1 491 aaPredicted RBP12.12□□□□□ -0.47
MRPL55-223ENST00000459783 ANKRD13CQ8N6S4 541 aa12.12□□□□□ -0.47
MRPL55-223ENST00000459783 GMCL1P1Q8NEA9 526 aa12.12□□□□□ -0.47
MRPL55-223ENST00000459783 LPAR1Q92633 364 aa12.12□□□□□ -0.47
MRPL55-223ENST00000459783 ESR2Q92731 530 aa12.12□□□□□ -0.47
MRPL55-223ENST00000459783 TMEM47Q9BQJ4 181 aa12.12□□□□□ -0.47
MRPL55-223ENST00000459783 SH2D4AQ9H788 454 aa12.12□□□□□ -0.47
MRPL55-223ENST00000459783 SENP2Q9HC62 589 aa12.12□□□□□ -0.47
MRPL55-223ENST00000459783 BTBD7Q9P203 1132 aa12.12□□□□□ -0.47
MRPL55-223ENST00000459783 MORF4L1Q9UBU8 362 aa12.12□□□□□ -0.47
MRPL55-223ENST00000459783 STX8Q9UNK0 236 aa12.12□□□□□ -0.47
MRPL55-223ENST00000459783 PABPC4Q13310 644 aaKnown RBP eCLIP12.11□□□□□ -0.475e-7■■■■■ 27.9
MRPL55-223ENST00000459783 SEC23AQ15436 765 aa12.11□□□□□ -0.47
MRPL55-223ENST00000459783 Q3C1V9 767 aa12.11□□□□□ -0.47
MRPL55-223ENST00000459783 ENAHQ8N8S7 591 aaPredicted RBP12.11□□□□□ -0.47
MRPL55-223ENST00000459783 SMCR8Q8TEV9 937 aaPredicted RBP12.11□□□□□ -0.47
MRPL55-223ENST00000459783 ATG4CQ96DT6 458 aa12.11□□□□□ -0.47
MRPL55-223ENST00000459783 TRIM47Q96LD4 638 aa12.11□□□□□ -0.47
MRPL55-223ENST00000459783 TANGO6Q9C0B7 1094 aa12.11□□□□□ -0.47
MRPL55-223ENST00000459783 GOPCQ9HD26 462 aa12.11□□□□□ -0.47
MRPL55-223ENST00000459783 GPHNQ9NQX3 736 aaPredicted RBP12.11□□□□□ -0.47
MRPL55-223ENST00000459783 PNMA3Q9UL41 463 aa12.11□□□□□ -0.47
MRPL55-223ENST00000459783 SYNPO2Q9UMS6 1093 aa12.11□□□□□ -0.47
MRPL55-223ENST00000459783 GTF3C3Q9Y5Q9 886 aa12.11□□□□□ -0.47
MRPL55-223ENST00000459783 A0A0G2JMZ2 1700 aa12.11□□□□□ -0.47
MRPL55-223ENST00000459783 RAD21O60216 631 aa12.1□□□□□ -0.47
MRPL55-223ENST00000459783 DSG3P32926 999 aa12.1□□□□□ -0.47
MRPL55-223ENST00000459783 FAM110CQ1W6H9 321 aa12.1□□□□□ -0.47
MRPL55-223ENST00000459783 ADCK5Q3MIX3 580 aa12.1□□□□□ -0.47
MRPL55-223ENST00000459783 SLFN13Q68D06 897 aa12.1□□□□□ -0.47
MRPL55-223ENST00000459783 CASC1Q6TDU7 716 aa12.1□□□□□ -0.47
MRPL55-223ENST00000459783 LBX2Q6XYB7 198 aa12.1□□□□□ -0.47
MRPL55-223ENST00000459783 CHST3Q7LGC8 479 aa12.1□□□□□ -0.47
MRPL55-223ENST00000459783 OTOP1Q7RTM1 612 aa12.1□□□□□ -0.47
MRPL55-223ENST00000459783 REPS2Q8NFH8 660 aa12.1□□□□□ -0.47
MRPL55-223ENST00000459783 ANKS1AQ92625 1134 aa12.1□□□□□ -0.47
MRPL55-223ENST00000459783 KCNB2Q92953 911 aa12.1□□□□□ -0.47
MRPL55-223ENST00000459783 ZSCAN10Q96SZ4 725 aaPredicted RBP12.1□□□□□ -0.47
MRPL55-223ENST00000459783 KRT23Q9C075 422 aa12.1□□□□□ -0.47
MRPL55-223ENST00000459783 ADAMTS5Q9UNA0 930 aa12.1□□□□□ -0.47
MRPL55-223ENST00000459783 TNKSO95271 1327 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms