RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 VCPKMTQ9H867 229 aa21.02■□□□□ 0.96
FAM239A-203ENST00000456563 UPF2Q9HAU5 1272 aaKnown RBP21.02■□□□□ 0.96
FAM239A-203ENST00000456563 TMOD4Q9NZQ9 345 aa21.02■□□□□ 0.96
FAM239A-203ENST00000456563 WDR19Q8NEZ3 1342 aa21.02■□□□□ 0.95
FAM239A-203ENST00000456563 PRC1O43663 620 aa21.01■□□□□ 0.95
FAM239A-203ENST00000456563 TOP1P11387 765 aaKnown RBP21.01■□□□□ 0.95
FAM239A-203ENST00000456563 EXOSC10Q01780 885 aaKnown RBP21.01■□□□□ 0.95
FAM239A-203ENST00000456563 SART3Q15020 963 aaKnown RBP21.01■□□□□ 0.95
FAM239A-203ENST00000456563 SEC23AQ15436 765 aa21.01■□□□□ 0.95
FAM239A-203ENST00000456563 ZYXQ15942 572 aaKnown RBP21.01■□□□□ 0.95
FAM239A-203ENST00000456563 CHST3Q7LGC8 479 aa21.01■□□□□ 0.95
FAM239A-203ENST00000456563 TMEM87BQ96K49 555 aa21.01■□□□□ 0.95
FAM239A-203ENST00000456563 THSD7BQ9C0I4 1608 aa21■□□□□ 0.95
FAM239A-203ENST00000456563 ERICH2A1L162 156 aa21■□□□□ 0.95
FAM239A-203ENST00000456563 IFIT3O14879 490 aaKnown RBP21■□□□□ 0.95
FAM239A-203ENST00000456563 RBM25P49756 843 aaKnown RBP21■□□□□ 0.95
FAM239A-203ENST00000456563 BLOC1S2Q6QNY1 142 aa21■□□□□ 0.95
FAM239A-203ENST00000456563 IGDCC4Q8TDY8 1250 aa21■□□□□ 0.95
FAM239A-203ENST00000456563 LPAR1Q92633 364 aa21■□□□□ 0.95
FAM239A-203ENST00000456563 PTPN18Q99952 460 aa21■□□□□ 0.95
FAM239A-203ENST00000456563 TMEM47Q9BQJ4 181 aa21■□□□□ 0.95
FAM239A-203ENST00000456563 C22orf23Q9BZE7 217 aa21■□□□□ 0.95
FAM239A-203ENST00000456563 ZSWIM6Q9HCJ5 1215 aa21■□□□□ 0.95
FAM239A-203ENST00000456563 GOPCQ9HD26 462 aa21■□□□□ 0.95
FAM239A-203ENST00000456563 F5H6K3 240 aa20.99■□□□□ 0.95
FAM239A-203ENST00000456563 KLRC3Q07444 240 aa20.99■□□□□ 0.95
FAM239A-203ENST00000456563 DGKZQ13574 1117 aa20.99■□□□□ 0.95
FAM239A-203ENST00000456563 TMEM67Q5HYA8 995 aa20.99■□□□□ 0.95
FAM239A-203ENST00000456563 GPAT2Q6NUI2 795 aa20.99■□□□□ 0.95
FAM239A-203ENST00000456563 GADL1Q6ZQY3 521 aa20.99■□□□□ 0.95
FAM239A-203ENST00000456563 ANKRD23Q86SG2 305 aa20.99■□□□□ 0.95
FAM239A-203ENST00000456563 LRRC47Q8N1G4 583 aaKnown RBP20.99■□□□□ 0.95
FAM239A-203ENST00000456563 GMCL1P1Q8NEA9 526 aa20.99■□□□□ 0.95
FAM239A-203ENST00000456563 ZCCHC17Q9NP64 241 aaKnown RBP20.99■□□□□ 0.95
FAM239A-203ENST00000456563 AGTPBP1Q9UPW5 1226 aa20.99■□□□□ 0.95
FAM239A-203ENST00000456563 PTPRFP10586 1907 aa20.99■□□□□ 0.95
FAM239A-203ENST00000456563 BTBD19C9JJ37 291 aa20.98■□□□□ 0.95
FAM239A-203ENST00000456563 CASTP20810 708 aaKnown RBP20.98■□□□□ 0.95
FAM239A-203ENST00000456563 RPS6KB1P23443 525 aa20.98■□□□□ 0.95
FAM239A-203ENST00000456563 WTAPQ15007 396 aa20.98■□□□□ 0.95
FAM239A-203ENST00000456563 KIAA1755Q5JYT7 1200 aa20.98■□□□□ 0.95
FAM239A-203ENST00000456563 IFIT1BQ5T764 474 aaKnown RBP20.98■□□□□ 0.95
FAM239A-203ENST00000456563 IFNL1Q8IU54 200 aa20.98■□□□□ 0.95
FAM239A-203ENST00000456563 SLC45A1Q9Y2W3 748 aa20.98■□□□□ 0.95
FAM239A-203ENST00000456563 IGF2BP3O00425 579 aaKnown RBP eCLIP20.97■□□□□ 0.95
FAM239A-203ENST00000456563 SH2B2O14492 632 aaPredicted RBP20.97■□□□□ 0.95
FAM239A-203ENST00000456563 NDUFB10O96000 172 aa20.97■□□□□ 0.95
FAM239A-203ENST00000456563 CPA1P15085 419 aa20.97■□□□□ 0.95
FAM239A-203ENST00000456563 VCAM1P19320 739 aa20.97■□□□□ 0.95
FAM239A-203ENST00000456563 LIFRP42702 1097 aa20.97■□□□□ 0.95
FAM239A-203ENST00000456563 TREML2Q5T2D2 321 aa20.97■□□□□ 0.95
FAM239A-203ENST00000456563 OTUD7BQ6GQQ9 843 aa20.97■□□□□ 0.95
FAM239A-203ENST00000456563 RUFY3Q7L099 469 aa20.97■□□□□ 0.95
FAM239A-203ENST00000456563 FAM43AQ8N2R8 423 aa20.97■□□□□ 0.95
FAM239A-203ENST00000456563 TMTC2Q8N394 836 aa20.97■□□□□ 0.95
FAM239A-203ENST00000456563 KAT14Q9H8E8 782 aa20.97■□□□□ 0.95
FAM239A-203ENST00000456563 LY9Q9HBG7 655 aa20.97■□□□□ 0.95
FAM239A-203ENST00000456563 LOC285556D6RIA3 1793 aa20.96■□□□□ 0.95
FAM239A-203ENST00000456563 WDR46O15213 610 aaKnown RBP20.96■□□□□ 0.95
FAM239A-203ENST00000456563 HOXA7P31268 230 aaPredicted RBP20.96■□□□□ 0.95
FAM239A-203ENST00000456563 SLFN13Q68D06 897 aa20.96■□□□□ 0.95
FAM239A-203ENST00000456563 SPICE1Q8N0Z3 855 aa20.96■□□□□ 0.95
FAM239A-203ENST00000456563 FBXL16Q8N461 479 aa20.96■□□□□ 0.95
FAM239A-203ENST00000456563 CYP46A1Q9Y6A2 500 aa20.96■□□□□ 0.95
FAM239A-203ENST00000456563 PABPC4Q13310 644 aaKnown RBP eCLIP20.95■□□□□ 0.94
FAM239A-203ENST00000456563 PNMA1Q8ND90 353 aa20.95■□□□□ 0.94
FAM239A-203ENST00000456563 GMCL1Q96IK5 515 aa20.95■□□□□ 0.94
FAM239A-203ENST00000456563 TCEANC2Q96MN5 208 aa20.95■□□□□ 0.94
FAM239A-203ENST00000456563 TBC1D32Q96NH3 1257 aa20.95■□□□□ 0.94
FAM239A-203ENST00000456563 LRRC2Q9BYS8 371 aa20.95■□□□□ 0.94
FAM239A-203ENST00000456563 SENP2Q9HC62 589 aa20.95■□□□□ 0.94
FAM239A-203ENST00000456563 GPHNQ9NQX3 736 aaPredicted RBP20.95■□□□□ 0.94
FAM239A-203ENST00000456563 MYH4Q9Y623 1939 aa20.95■□□□□ 0.94
FAM239A-203ENST00000456563 USP17L15C9J2P7 530 aa20.94■□□□□ 0.94
FAM239A-203ENST00000456563 USP17L13C9JLJ4 530 aa20.94■□□□□ 0.94
FAM239A-203ENST00000456563 USP17L11C9JVI0 530 aa20.94■□□□□ 0.94
FAM239A-203ENST00000456563 USP17L18D6R9N7 530 aa20.94■□□□□ 0.94
FAM239A-203ENST00000456563 USP17L22D6RA61 530 aa20.94■□□□□ 0.94
FAM239A-203ENST00000456563 USP17L17D6RBQ6 530 aa20.94■□□□□ 0.94
FAM239A-203ENST00000456563 USP17L19D6RCP7 530 aa20.94■□□□□ 0.94
FAM239A-203ENST00000456563 USP17L20D6RJB6 530 aa20.94■□□□□ 0.94
FAM239A-203ENST00000456563 PDHXO00330 501 aa20.94■□□□□ 0.94
FAM239A-203ENST00000456563 RAD21O60216 631 aa20.94■□□□□ 0.94
FAM239A-203ENST00000456563 ALDH1A1P00352 501 aa20.94■□□□□ 0.94
FAM239A-203ENST00000456563 MAP2K1Q02750 393 aaPredicted RBP20.94■□□□□ 0.94
FAM239A-203ENST00000456563 USP17L24Q0WX57 530 aa20.94■□□□□ 0.94
FAM239A-203ENST00000456563 JMYQ8N9B5 988 aa20.94■□□□□ 0.94
FAM239A-203ENST00000456563 AGXT2Q9BYV1 514 aa20.94■□□□□ 0.94
FAM239A-203ENST00000456563 UPF3BQ9BZI7 483 aaKnown RBP20.94■□□□□ 0.94
FAM239A-203ENST00000456563 RPAP3Q9H6T3 665 aaPredicted RBP20.94■□□□□ 0.94
FAM239A-203ENST00000456563 SNHG28P0DPA3 235 aa20.93■□□□□ 0.94
FAM239A-203ENST00000456563 CATSPERGQ6ZRH7 1159 aa20.93■□□□□ 0.94
FAM239A-203ENST00000456563 SGMS1Q86VZ5 419 aa20.93■□□□□ 0.94
FAM239A-203ENST00000456563 DCAF4Q8WV16 495 aa20.93■□□□□ 0.94
FAM239A-203ENST00000456563 KIF2CQ99661 725 aa20.93■□□□□ 0.94
FAM239A-203ENST00000456563 PDHBP11177 359 aa20.92■□□□□ 0.94
FAM239A-203ENST00000456563 OSBPP22059 807 aa20.92■□□□□ 0.94
FAM239A-203ENST00000456563 SLC1A4P43007 532 aa20.92■□□□□ 0.94
FAM239A-203ENST00000456563 FAM83BQ5T0W9 1011 aa20.92■□□□□ 0.94
FAM239A-203ENST00000456563 Q6ZUG5 572 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms