RNA–Protein interactions for RNA: ENST00000456433.5

PMPCB-206, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-206ENST00000456433 HOXA7P31268 230 aaPredicted RBP20.13■□□□□ 0.81
PMPCB-206ENST00000456433 RCSD1Q6JBY9 416 aa20.13■□□□□ 0.81
PMPCB-206ENST00000456433 GADL1Q6ZQY3 521 aa20.13■□□□□ 0.81
PMPCB-206ENST00000456433 CYB5R4Q7L1T6 521 aa20.13■□□□□ 0.81
PMPCB-206ENST00000456433 DGKHQ86XP1 1220 aa20.13■□□□□ 0.81
PMPCB-206ENST00000456433 GOPCQ9HD26 462 aa20.13■□□□□ 0.81
PMPCB-206ENST00000456433 CLIP2Q9UDT6 1046 aa20.13■□□□□ 0.81
PMPCB-206ENST00000456433 VCAM1P19320 739 aa20.12■□□□□ 0.81
PMPCB-206ENST00000456433 MCCP23508 829 aa20.12■□□□□ 0.81
PMPCB-206ENST00000456433 ATP2B2Q01814 1243 aa20.12■□□□□ 0.81
PMPCB-206ENST00000456433 PABPC4Q13310 644 aaKnown RBP eCLIP20.12■□□□□ 0.81
PMPCB-206ENST00000456433 DGKZQ13574 1117 aa20.12■□□□□ 0.81
PMPCB-206ENST00000456433 TREML2Q5T2D2 321 aa20.12■□□□□ 0.81
PMPCB-206ENST00000456433 GMCL1P1Q8NEA9 526 aa20.12■□□□□ 0.81
PMPCB-206ENST00000456433 ZSCAN10Q96SZ4 725 aaPredicted RBP20.12■□□□□ 0.81
PMPCB-206ENST00000456433 RNF186Q9NXI6 227 aa20.12■□□□□ 0.81
PMPCB-206ENST00000456433 STX8Q9UNK0 236 aa20.12■□□□□ 0.81
PMPCB-206ENST00000456433 SNX14Q9Y5W7 946 aa20.12■□□□□ 0.81
PMPCB-206ENST00000456433 WDR19Q8NEZ3 1342 aa20.11■□□□□ 0.81
PMPCB-206ENST00000456433 PDHXO00330 501 aa20.11■□□□□ 0.81
PMPCB-206ENST00000456433 SEC24BO95487 1268 aa20.11■□□□□ 0.81
PMPCB-206ENST00000456433 TOP1P11387 765 aaKnown RBP20.11■□□□□ 0.81
PMPCB-206ENST00000456433 UBAC1Q9BSL1 405 aa20.11■□□□□ 0.81
PMPCB-206ENST00000456433 TNKSO95271 1327 aa20.1■□□□□ 0.81
PMPCB-206ENST00000456433 F5H6K3 240 aa20.1■□□□□ 0.81
PMPCB-206ENST00000456433 WDR46O15213 610 aaKnown RBP20.1■□□□□ 0.81
PMPCB-206ENST00000456433 MCM5P33992 734 aa20.1■□□□□ 0.81
PMPCB-206ENST00000456433 ANTXR2P58335 489 aa20.1■□□□□ 0.81
PMPCB-206ENST00000456433 KLRC3Q07444 240 aa20.1■□□□□ 0.81
PMPCB-206ENST00000456433 SEC23AQ15436 765 aa20.1■□□□□ 0.81
PMPCB-206ENST00000456433 ZYXQ15942 572 aaKnown RBP20.1■□□□□ 0.81
PMPCB-206ENST00000456433 KIAA1755Q5JYT7 1200 aa20.1■□□□□ 0.81
PMPCB-206ENST00000456433 ENAHQ8N8S7 591 aaPredicted RBP20.1■□□□□ 0.81
PMPCB-206ENST00000456433 IL17RAQ96F46 866 aa20.1■□□□□ 0.81
PMPCB-206ENST00000456433 NEK1Q96PY6 1258 aa20.1■□□□□ 0.81
PMPCB-206ENST00000456433 BEGAINQ9BUH8 593 aa20.1■□□□□ 0.81
PMPCB-206ENST00000456433 PARP14Q460N5 1801 aa20.09■□□□□ 0.81
PMPCB-206ENST00000456433 HMGB1P09429 215 aaKnown RBP20.09■□□□□ 0.81
PMPCB-206ENST00000456433 ANAPC15P60006 121 aa20.09■□□□□ 0.81
PMPCB-206ENST00000456433 SART3Q15020 963 aaKnown RBP20.09■□□□□ 0.81
PMPCB-206ENST00000456433 ADCK5Q3MIX3 580 aa20.09■□□□□ 0.81
PMPCB-206ENST00000456433 LRRC47Q8N1G4 583 aaKnown RBP20.09■□□□□ 0.81
PMPCB-206ENST00000456433 PARK7Q99497 189 aaKnown RBP20.09■□□□□ 0.81
PMPCB-206ENST00000456433 TMEM47Q9BQJ4 181 aa20.09■□□□□ 0.81
PMPCB-206ENST00000456433 ZKSCAN3Q9BRR0 538 aa20.09■□□□□ 0.81
PMPCB-206ENST00000456433 PNMA3Q9UL41 463 aa20.09■□□□□ 0.81
PMPCB-206ENST00000456433 RLFQ13129 1914 aa20.09■□□□□ 0.81
PMPCB-206ENST00000456433 ADGRA2Q96PE1 1338 aa20.08■□□□□ 0.81
PMPCB-206ENST00000456433 USP17L15C9J2P7 530 aa20.08■□□□□ 0.81
PMPCB-206ENST00000456433 USP17L13C9JLJ4 530 aa20.08■□□□□ 0.81
PMPCB-206ENST00000456433 USP17L11C9JVI0 530 aa20.08■□□□□ 0.81
PMPCB-206ENST00000456433 USP17L18D6R9N7 530 aa20.08■□□□□ 0.81
PMPCB-206ENST00000456433 USP17L22D6RA61 530 aa20.08■□□□□ 0.81
PMPCB-206ENST00000456433 USP17L17D6RBQ6 530 aa20.08■□□□□ 0.81
PMPCB-206ENST00000456433 USP17L19D6RCP7 530 aa20.08■□□□□ 0.81
PMPCB-206ENST00000456433 USP17L20D6RJB6 530 aa20.08■□□□□ 0.81
PMPCB-206ENST00000456433 NDUFB10O96000 172 aa20.08■□□□□ 0.81
PMPCB-206ENST00000456433 USP17L24Q0WX57 530 aa20.08■□□□□ 0.81
PMPCB-206ENST00000456433 TAF1CQ15572 869 aaPredicted RBP20.08■□□□□ 0.81
PMPCB-206ENST00000456433 NOM1Q5C9Z4 860 aaKnown RBP20.08■□□□□ 0.81
PMPCB-206ENST00000456433 GMCL1Q96IK5 515 aa20.08■□□□□ 0.81
PMPCB-206ENST00000456433 TMEM87BQ96K49 555 aa20.08■□□□□ 0.81
PMPCB-206ENST00000456433 PRC1O43663 620 aa20.07■□□□□ 0.8
PMPCB-206ENST00000456433 TRPA1O75762 1119 aa20.07■□□□□ 0.8
PMPCB-206ENST00000456433 OSBPP22059 807 aa20.07■□□□□ 0.8
PMPCB-206ENST00000456433 PSMA5P28066 241 aa20.07■□□□□ 0.8
PMPCB-206ENST00000456433 EXOSC10Q01780 885 aaKnown RBP20.07■□□□□ 0.8
PMPCB-206ENST00000456433 COL9A3Q14050 684 aaPredicted RBP20.07■□□□□ 0.8
PMPCB-206ENST00000456433 CATSPERGQ6ZRH7 1159 aa20.07■□□□□ 0.8
PMPCB-206ENST00000456433 DHX32Q7L7V1 743 aaKnown RBP20.07■□□□□ 0.8
PMPCB-206ENST00000456433 IGDCC4Q8TDY8 1250 aa20.07■□□□□ 0.8
PMPCB-206ENST00000456433 TM6SF1Q9BZW5 370 aa20.07■□□□□ 0.8
PMPCB-206ENST00000456433 ASCC2Q9H1I8 757 aaPredicted RBP20.07■□□□□ 0.8
PMPCB-206ENST00000456433 RPAP3Q9H6T3 665 aaPredicted RBP20.07■□□□□ 0.8
PMPCB-206ENST00000456433 ZFYVE28Q9HCC9 887 aa20.07■□□□□ 0.8
PMPCB-206ENST00000456433 MYPNQ86TC9 1320 aa20.06■□□□□ 0.8
PMPCB-206ENST00000456433 ERICH2A1L162 156 aa20.06■□□□□ 0.8
PMPCB-206ENST00000456433 IFIT3O14879 490 aaKnown RBP20.06■□□□□ 0.8
PMPCB-206ENST00000456433 CRHR2Q13324 411 aa20.06■□□□□ 0.8
PMPCB-206ENST00000456433 IFIT1BQ5T764 474 aaKnown RBP20.06■□□□□ 0.8
PMPCB-206ENST00000456433 SPICE1Q8N0Z3 855 aa20.06■□□□□ 0.8
PMPCB-206ENST00000456433 JAKMIP1Q96N16 626 aaKnown RBP20.06■□□□□ 0.8
PMPCB-206ENST00000456433 TLR2O60603 784 aa20.05■□□□□ 0.8
PMPCB-206ENST00000456433 HSPA1AP0DMV8 641 aaKnown RBP20.05■□□□□ 0.8
PMPCB-206ENST00000456433 HSPA1BP0DMV9 641 aaKnown RBP20.05■□□□□ 0.8
PMPCB-206ENST00000456433 SNHG28P0DPA3 235 aa20.05■□□□□ 0.8
PMPCB-206ENST00000456433 IRX3P78415 501 aaPredicted RBP20.05■□□□□ 0.8
PMPCB-206ENST00000456433 WTAPQ15007 396 aa20.05■□□□□ 0.8
PMPCB-206ENST00000456433 SLFN13Q68D06 897 aa20.05■□□□□ 0.8
PMPCB-206ENST00000456433 LBX2Q6XYB7 198 aa20.05■□□□□ 0.8
PMPCB-206ENST00000456433 PNMA1Q8ND90 353 aa20.05■□□□□ 0.8
PMPCB-206ENST00000456433 GTF3C2Q8WUA4 911 aaPredicted RBP20.05■□□□□ 0.8
PMPCB-206ENST00000456433 DCAF4Q8WV16 495 aa20.05■□□□□ 0.8
PMPCB-206ENST00000456433 KAT14Q9H8E8 782 aa20.05■□□□□ 0.8
PMPCB-206ENST00000456433 SH2B2O14492 632 aaPredicted RBP20.04■□□□□ 0.8
PMPCB-206ENST00000456433 PLA2G6O60733 806 aa20.04■□□□□ 0.8
PMPCB-206ENST00000456433 CYP2C8P10632 490 aa20.04■□□□□ 0.8
PMPCB-206ENST00000456433 LIFRP42702 1097 aa20.04■□□□□ 0.8
PMPCB-206ENST00000456433 TMEM67Q5HYA8 995 aa20.04■□□□□ 0.8
PMPCB-206ENST00000456433 FAM83BQ5T0W9 1011 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms