RNA–Protein interactions for RNA: ENST00000456235.1

LINC01563-201, Transcript of long intergenic non-protein coding RNA 1563, humanhuman

TSL 2 BASIC

Gene LINC01563, Length 750 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01563-201ENST00000456235 P2RX7Q99572 595 aaKnown RBP16.65■□□□□ 0.26
LINC01563-201ENST00000456235 CFHR5Q9BXR6 569 aa16.65■□□□□ 0.26
LINC01563-201ENST00000456235 ZNF287Q9HBT7 754 aa16.65■□□□□ 0.26
LINC01563-201ENST00000456235 PRDM10Q9NQV6 1147 aa16.65■□□□□ 0.26
LINC01563-201ENST00000456235 ISY1Q9ULR0 285 aaKnown RBP16.65■□□□□ 0.26
LINC01563-201ENST00000456235 STX8Q9UNK0 236 aa16.65■□□□□ 0.26
LINC01563-201ENST00000456235 ORC4O43929 436 aa16.64■□□□□ 0.25
LINC01563-201ENST00000456235 KDM4AO75164 1064 aa16.64■□□□□ 0.25
LINC01563-201ENST00000456235 CYP21A2P08686 494 aa16.64■□□□□ 0.25
LINC01563-201ENST00000456235 OSBPP22059 807 aa16.64■□□□□ 0.25
LINC01563-201ENST00000456235 USP14P54578 494 aa16.64■□□□□ 0.25
LINC01563-201ENST00000456235 COL9A3Q14050 684 aaPredicted RBP16.64■□□□□ 0.25
LINC01563-201ENST00000456235 POTEEQ6S8J3 1075 aa16.64■□□□□ 0.25
LINC01563-201ENST00000456235 STOX1Q6ZVD7 989 aa16.64■□□□□ 0.25
LINC01563-201ENST00000456235 PAGR1Q9BTK6 254 aa16.64■□□□□ 0.25
LINC01563-201ENST00000456235 VCPKMTQ9H867 229 aa16.64■□□□□ 0.25
LINC01563-201ENST00000456235 MTMR4Q9NYA4 1195 aa16.64■□□□□ 0.25
LINC01563-201ENST00000456235 TMX2Q9Y320 296 aa16.64■□□□□ 0.25
LINC01563-201ENST00000456235 SP3Q02447 781 aa16.63■□□□□ 0.25
LINC01563-201ENST00000456235 FAM83BQ5T0W9 1011 aa16.63■□□□□ 0.25
LINC01563-201ENST00000456235 C17orf99Q6UX52 265 aa16.63■□□□□ 0.25
LINC01563-201ENST00000456235 KIAA1211Q6ZU35 1233 aa16.63■□□□□ 0.25
LINC01563-201ENST00000456235 CHST3Q7LGC8 479 aa16.63■□□□□ 0.25
LINC01563-201ENST00000456235 C12orf42Q96LP6 360 aa16.63■□□□□ 0.25
LINC01563-201ENST00000456235 TXNRD2Q9NNW7 524 aa16.63■□□□□ 0.25
LINC01563-201ENST00000456235 ZCCHC17Q9NP64 241 aaKnown RBP16.63■□□□□ 0.25
LINC01563-201ENST00000456235 FBXO28Q9NVF7 368 aa16.63■□□□□ 0.25
LINC01563-201ENST00000456235 CTNNA3Q9UI47 895 aa16.63■□□□□ 0.25
LINC01563-201ENST00000456235 PNMA3Q9UL41 463 aa16.63■□□□□ 0.25
LINC01563-201ENST00000456235 U3KPZ7 1027 aaPredicted RBP16.63■□□□□ 0.25
LINC01563-201ENST00000456235 TTLL1O95922 423 aa16.62■□□□□ 0.25
LINC01563-201ENST00000456235 NDUFB10O96000 172 aa16.62■□□□□ 0.25
LINC01563-201ENST00000456235 FGRP09769 529 aa16.62■□□□□ 0.25
LINC01563-201ENST00000456235 BCRP11274 1271 aa16.62■□□□□ 0.25
LINC01563-201ENST00000456235 HERVK_113P62684 666 aa16.62■□□□□ 0.25
LINC01563-201ENST00000456235 CASC1Q6TDU7 716 aa16.62■□□□□ 0.25
LINC01563-201ENST00000456235 MAP4K1Q92918 833 aa16.62■□□□□ 0.25
LINC01563-201ENST00000456235 GOPCQ9HD26 462 aa16.62■□□□□ 0.25
LINC01563-201ENST00000456235 TAOK2Q9UL54 1235 aa16.62■□□□□ 0.25
LINC01563-201ENST00000456235 SLC45A1Q9Y2W3 748 aa16.62■□□□□ 0.25
LINC01563-201ENST00000456235 TRIM17Q9Y577 477 aa16.62■□□□□ 0.25
LINC01563-201ENST00000456235 USP17L15C9J2P7 530 aa16.61■□□□□ 0.25
LINC01563-201ENST00000456235 USP17L13C9JLJ4 530 aa16.61■□□□□ 0.25
LINC01563-201ENST00000456235 USP17L11C9JVI0 530 aa16.61■□□□□ 0.25
LINC01563-201ENST00000456235 USP17L18D6R9N7 530 aa16.61■□□□□ 0.25
LINC01563-201ENST00000456235 USP17L22D6RA61 530 aa16.61■□□□□ 0.25
LINC01563-201ENST00000456235 USP17L17D6RBQ6 530 aa16.61■□□□□ 0.25
LINC01563-201ENST00000456235 USP17L19D6RCP7 530 aa16.61■□□□□ 0.25
LINC01563-201ENST00000456235 USP17L20D6RJB6 530 aa16.61■□□□□ 0.25
LINC01563-201ENST00000456235 USP17L24Q0WX57 530 aa16.61■□□□□ 0.25
LINC01563-201ENST00000456235 PABPC4Q13310 644 aaKnown RBP eCLIP16.61■□□□□ 0.25
LINC01563-201ENST00000456235 CATSPERGQ6ZRH7 1159 aa16.61■□□□□ 0.25
LINC01563-201ENST00000456235 CYB5R4Q7L1T6 521 aa16.61■□□□□ 0.25
LINC01563-201ENST00000456235 RNF41Q9H4P4 317 aaPredicted RBP16.61■□□□□ 0.25
LINC01563-201ENST00000456235 SH2D4AQ9H788 454 aa16.61■□□□□ 0.25
LINC01563-201ENST00000456235 NYAP2Q9P242 653 aa16.61■□□□□ 0.25
LINC01563-201ENST00000456235 SPDYE16A6NNV3 312 aaPredicted RBP16.6■□□□□ 0.25
LINC01563-201ENST00000456235 E7EWF7 191 aa16.6■□□□□ 0.25
LINC01563-201ENST00000456235 F5H6K3 240 aa16.6■□□□□ 0.25
LINC01563-201ENST00000456235 SLC27A2O14975 620 aa16.6■□□□□ 0.25
LINC01563-201ENST00000456235 CNMDO75829 334 aa16.6■□□□□ 0.25
LINC01563-201ENST00000456235 FLOT1O75955 427 aa16.6■□□□□ 0.25
LINC01563-201ENST00000456235 LACTBP83111 547 aaPredicted RBP16.6■□□□□ 0.25
LINC01563-201ENST00000456235 KLRC3Q07444 240 aa16.6■□□□□ 0.25
LINC01563-201ENST00000456235 TNS4Q8IZW8 715 aa16.6■□□□□ 0.25
LINC01563-201ENST00000456235 ESR2Q92731 530 aa16.6■□□□□ 0.25
LINC01563-201ENST00000456235 ATG4CQ96DT6 458 aa16.6■□□□□ 0.25
LINC01563-201ENST00000456235 MCOLN1Q9GZU1 580 aa16.6■□□□□ 0.25
LINC01563-201ENST00000456235 PLXNB2O15031 1838 aa16.59■□□□□ 0.25
LINC01563-201ENST00000456235 HOXA7P31268 230 aaPredicted RBP16.59■□□□□ 0.25
LINC01563-201ENST00000456235 CREB3L3Q68CJ9 461 aa16.59■□□□□ 0.25
LINC01563-201ENST00000456235 SLFN13Q68D06 897 aa16.59■□□□□ 0.25
LINC01563-201ENST00000456235 OTOP1Q7RTM1 612 aa16.59■□□□□ 0.25
LINC01563-201ENST00000456235 CTU1Q7Z7A3 348 aaKnown RBP16.59■□□□□ 0.25
LINC01563-201ENST00000456235 ERO1AQ96HE7 468 aa16.59■□□□□ 0.25
LINC01563-201ENST00000456235 TRIM47Q96LD4 638 aa16.59■□□□□ 0.25
LINC01563-201ENST00000456235 TMEM47Q9BQJ4 181 aa16.59■□□□□ 0.25
LINC01563-201ENST00000456235 BTBD7Q9P203 1132 aa16.59■□□□□ 0.25
LINC01563-201ENST00000456235 FRMPD2Q68DX3 1309 aaPredicted RBP16.59■□□□□ 0.25
LINC01563-201ENST00000456235 WDR46O15213 610 aaKnown RBP16.58■□□□□ 0.24
LINC01563-201ENST00000456235 TAL1P17542 331 aaPredicted RBP16.58■□□□□ 0.24
LINC01563-201ENST00000456235 MCCP23508 829 aa16.58■□□□□ 0.24
LINC01563-201ENST00000456235 PSMC4P43686 418 aa16.58■□□□□ 0.24
LINC01563-201ENST00000456235 SNAP25P60880 206 aa16.58■□□□□ 0.24
LINC01563-201ENST00000456235 Q3C1V9 767 aa16.58■□□□□ 0.24
LINC01563-201ENST00000456235 RCSD1Q6JBY9 416 aa16.58■□□□□ 0.24
LINC01563-201ENST00000456235 KCTD1Q719H9 257 aa16.58■□□□□ 0.24
LINC01563-201ENST00000456235 SENP2Q9HC62 589 aa16.58■□□□□ 0.24
LINC01563-201ENST00000456235 ZSWIM5Q9P217 1185 aa16.58■□□□□ 0.24
LINC01563-201ENST00000456235 RBPJLQ9UBG7 517 aa16.58■□□□□ 0.24
LINC01563-201ENST00000456235 GTF3C3Q9Y5Q9 886 aa16.58■□□□□ 0.24
LINC01563-201ENST00000456235 TNKSO95271 1327 aa16.58■□□□□ 0.24
LINC01563-201ENST00000456235 DOCK3Q8IZD9 2030 aa16.57■□□□□ 0.24
LINC01563-201ENST00000456235 FMNL1O95466 1100 aaPredicted RBP16.57■□□□□ 0.24
LINC01563-201ENST00000456235 CCDC96Q2M329 555 aa16.57■□□□□ 0.24
LINC01563-201ENST00000456235 LPAR1Q92633 364 aa16.57■□□□□ 0.24
LINC01563-201ENST00000456235 PORCNQ9H237 461 aa16.57■□□□□ 0.24
LINC01563-201ENST00000456235 EFCC1Q9HA90 598 aa16.57■□□□□ 0.24
LINC01563-201ENST00000456235 GPHNQ9NQX3 736 aaPredicted RBP16.57■□□□□ 0.24
LINC01563-201ENST00000456235 CAPN15O75808 1086 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms