RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 FNDC3AQ9Y2H6 1198 aaKnown RBP6.35□□□□□ -1.39
HMGB1P4-201ENST00000455362 MSRB2Q9Y3D2 182 aa6.35□□□□□ -1.39
HMGB1P4-201ENST00000455362 LAMB4A4D0S4 1761 aa6.35□□□□□ -1.39
HMGB1P4-201ENST00000455362 ADCY9O60503 1353 aa6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 EP400Q96L91 3159 aa6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 LOC102724428A0A0B4J2F2 783 aa6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 MEN1O00255 615 aa6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 LCE2BO14633 110 aa6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 SIAH2O43255 324 aa6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 DDX58O95786 925 aaKnown RBP6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 IGHDP01880 384 aa6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 VIL1P09327 827 aaKnown RBP6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 RXRBP28702 533 aa6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 SIK1P57059 783 aa6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 APOBRQ0VD83 1088 aa6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 AIMP1Q12904 312 aaKnown RBP6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 SQSTM1Q13501 440 aa6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 RASGRF1Q13972 1273 aa6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 TCEA2Q15560 299 aa6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 DDR2Q16832 855 aa6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 TKFCQ3LXA3 575 aa6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 GNASQ5JWF2 1037 aa6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 BEND3Q5T5X7 828 aa6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 PCNX4Q63HM2 1172 aa6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 FAM196AQ6ZSG2 479 aa6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 KRT26Q7Z3Y9 468 aa6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 CELF2-AS1Q8N7Q2 184 aa6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 DNAAF4Q8WXU2 420 aa6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 MAP3K2Q9Y2U5 619 aa6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 LEMD3Q9Y2U8 911 aa6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 HRH3Q9Y5N1 445 aa6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 WASF2Q9Y6W5 498 aa6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 MYH14Q7Z406 1995 aaKnown RBP6.34□□□□□ -1.39
HMGB1P4-201ENST00000455362 BTAF1O14981 1849 aa6.34□□□□□ -1.4
HMGB1P4-201ENST00000455362 PALLDQ8WX93 1383 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 KDM2BQ8NHM5 1336 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 WNT7AO00755 349 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 MICAL2O94851 1124 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 POLR3DP05423 398 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 NR3C2P08235 984 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 PTGIRP43119 386 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 PRR20EP86478 221 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 PRR20CP86479 221 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 PRR20DP86480 221 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 PRR20BP86481 221 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 PRR20AP86496 221 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 FAM160A1Q05DH4 1040 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 ITPK1Q13572 414 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 MAP3K11Q16584 847 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 MTERF2Q49AM1 385 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 C2orf27AQ580R0 203 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 SNAP47Q5SQN1 464 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 ZNF697Q5TEC3 545 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 INTS5Q6P9B9 1019 aaKnown RBP6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 CCDC81Q6ZN84 652 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 RHPN1Q8TCX5 695 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 RHBDD1Q8TEB9 315 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 THAP3Q8WTV1 239 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 ZDHHC1Q8WTX9 485 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 NKD1Q969G9 470 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 TRIM56Q9BRZ2 755 aaKnown RBP6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 METTL22Q9BUU2 404 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 FHDC1Q9C0D6 1143 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 USP44Q9H0E7 712 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 RWDD1Q9H446 243 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 SUV39H2Q9H5I1 410 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 ACTR10Q9NZ32 417 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 MAPK8IP1Q9UQF2 711 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 ATP8A1Q9Y2Q0 1164 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 PARP3Q9Y6F1 533 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 COMMD10Q9Y6G5 202 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 N4BP2Q86UW6 1770 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 TJP1Q07157 1748 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 ZNF831Q5JPB2 1677 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 NHSQ6T4R5 1651 aa6.33□□□□□ -1.4
HMGB1P4-201ENST00000455362 POTECB2RU33 542 aa6.32□□□□□ -1.4
HMGB1P4-201ENST00000455362 CAND2O75155 1236 aa6.32□□□□□ -1.4
HMGB1P4-201ENST00000455362 ALDH1L1O75891 902 aa6.32□□□□□ -1.4
HMGB1P4-201ENST00000455362 IGKV5-2P06315 115 aa6.32□□□□□ -1.4
HMGB1P4-201ENST00000455362 GNAI3P08754 354 aa6.32□□□□□ -1.4
HMGB1P4-201ENST00000455362 NNTQ13423 1086 aa6.32□□□□□ -1.4
HMGB1P4-201ENST00000455362 HDAC1Q13547 482 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P4-201ENST00000455362 UBE4AQ14139 1066 aa6.32□□□□□ -1.4
HMGB1P4-201ENST00000455362 GRM2Q14416 872 aa6.32□□□□□ -1.4
HMGB1P4-201ENST00000455362 MAP9Q49MG5 647 aa6.32□□□□□ -1.4
HMGB1P4-201ENST00000455362 C4orf46Q504U0 113 aa6.32□□□□□ -1.4
HMGB1P4-201ENST00000455362 BRDTQ58F21 947 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P4-201ENST00000455362 FBXL19Q6PCT2 694 aa6.32□□□□□ -1.4
HMGB1P4-201ENST00000455362 XKR5Q6UX68 686 aa6.32□□□□□ -1.4
HMGB1P4-201ENST00000455362 TTLL7Q6ZT98 887 aa6.32□□□□□ -1.4
HMGB1P4-201ENST00000455362 CENPQQ7L2Z9 268 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P4-201ENST00000455362 SIRT2Q8IXJ6 389 aa6.32□□□□□ -1.4
HMGB1P4-201ENST00000455362 LINS1Q8NG48 757 aa6.32□□□□□ -1.4
HMGB1P4-201ENST00000455362 PLBD2Q8NHP8 589 aa6.32□□□□□ -1.4
HMGB1P4-201ENST00000455362 SHDQ96IW2 340 aa6.32□□□□□ -1.4
HMGB1P4-201ENST00000455362 MEIS3Q99687 375 aa6.32□□□□□ -1.4
HMGB1P4-201ENST00000455362 RBSNQ9H1K0 784 aa6.32□□□□□ -1.4
HMGB1P4-201ENST00000455362 UBP1Q9NZI7 540 aa6.32□□□□□ -1.4
HMGB1P4-201ENST00000455362 PLAAQ9Y263 795 aa6.32□□□□□ -1.4
HMGB1P4-201ENST00000455362 PXDNLA1KZ92 1463 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms