RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 SPDYE5A6NIY4 337 aa19.4■□□□□ 0.7
CCDC90B-202ENST00000455220 GOLGA8BA8MQT2 603 aa19.4■□□□□ 0.7
CCDC90B-202ENST00000455220 K7ELQ4 463 aaPredicted RBP19.4■□□□□ 0.7
CCDC90B-202ENST00000455220 ZBTB43O43298 467 aa19.4■□□□□ 0.7
CCDC90B-202ENST00000455220 ECE1P42892 770 aa19.4■□□□□ 0.7
CCDC90B-202ENST00000455220 ATP2B2Q01814 1243 aa19.4■□□□□ 0.7
CCDC90B-202ENST00000455220 GMCL1P1Q8NEA9 526 aa19.4■□□□□ 0.7
CCDC90B-202ENST00000455220 TMX3Q96JJ7 454 aa19.4■□□□□ 0.7
CCDC90B-202ENST00000455220 MAP3K14Q99558 947 aa19.4■□□□□ 0.7
CCDC90B-202ENST00000455220 SH2D4AQ9H788 454 aa19.4■□□□□ 0.7
CCDC90B-202ENST00000455220 PFKFB2O60825 505 aa19.4■□□□□ 0.7
CCDC90B-202ENST00000455220 CALM1P0DP23 149 aa19.4■□□□□ 0.7
CCDC90B-202ENST00000455220 CALM2P0DP24 149 aa19.4■□□□□ 0.7
CCDC90B-202ENST00000455220 CALM3P0DP25 149 aa19.4■□□□□ 0.7
CCDC90B-202ENST00000455220 PPATQ06203 517 aa19.4■□□□□ 0.7
CCDC90B-202ENST00000455220 SYNE3Q6ZMZ3 975 aa19.4■□□□□ 0.7
CCDC90B-202ENST00000455220 ERO1BQ86YB8 467 aa19.4■□□□□ 0.7
CCDC90B-202ENST00000455220 ZNF280CQ8ND82 737 aa19.4■□□□□ 0.7
CCDC90B-202ENST00000455220 MYL10Q9BUA6 226 aa19.4■□□□□ 0.7
CCDC90B-202ENST00000455220 ELP3Q9H9T3 547 aa19.4■□□□□ 0.7
CCDC90B-202ENST00000455220 AFG3L2Q9Y4W6 797 aa19.4■□□□□ 0.7
CCDC90B-202ENST00000455220 ZHX2Q9Y6X8 837 aa19.4■□□□□ 0.7
CCDC90B-202ENST00000455220 SNHG28P0DPA3 235 aa19.39■□□□□ 0.69
CCDC90B-202ENST00000455220 MICU3Q86XE3 530 aa19.39■□□□□ 0.69
CCDC90B-202ENST00000455220 KIAA1683Q9H0B3 1180 aa19.39■□□□□ 0.69
CCDC90B-202ENST00000455220 BECN1Q14457 450 aa19.38■□□□□ 0.69
CCDC90B-202ENST00000455220 GTF3C6Q969F1 213 aa19.38■□□□□ 0.69
CCDC90B-202ENST00000455220 SLKQ9H2G2 1235 aaPredicted RBP19.38■□□□□ 0.69
CCDC90B-202ENST00000455220 VCPKMTQ9H867 229 aa19.38■□□□□ 0.69
CCDC90B-202ENST00000455220 PTPRFP10586 1907 aa19.37■□□□□ 0.69
CCDC90B-202ENST00000455220 USP17L10C9JJH3 530 aa19.37■□□□□ 0.69
CCDC90B-202ENST00000455220 F5H6K3 240 aa19.37■□□□□ 0.69
CCDC90B-202ENST00000455220 PDHBP11177 359 aa19.37■□□□□ 0.69
CCDC90B-202ENST00000455220 RXRAP19793 462 aa19.37■□□□□ 0.69
CCDC90B-202ENST00000455220 METAP2P50579 478 aaKnown RBP eCLIP19.37■□□□□ 0.69
CCDC90B-202ENST00000455220 BACE1P56817 501 aa19.37■□□□□ 0.69
CCDC90B-202ENST00000455220 KLRC3Q07444 240 aa19.37■□□□□ 0.69
CCDC90B-202ENST00000455220 ST3GAL1Q11201 340 aa19.37■□□□□ 0.69
CCDC90B-202ENST00000455220 SCRN1Q12765 414 aa19.37■□□□□ 0.69
CCDC90B-202ENST00000455220 SPP2Q13103 211 aa19.37■□□□□ 0.69
CCDC90B-202ENST00000455220 GRM4Q14833 912 aa19.37■□□□□ 0.69
CCDC90B-202ENST00000455220 PPP2R5BQ15173 497 aa19.37■□□□□ 0.69
CCDC90B-202ENST00000455220 RAB11FIP4Q86YS3 637 aa19.37■□□□□ 0.69
CCDC90B-202ENST00000455220 FANCBQ8NB91 859 aa19.37■□□□□ 0.69
CCDC90B-202ENST00000455220 CNKSR2Q8WXI2 1034 aa19.37■□□□□ 0.69
CCDC90B-202ENST00000455220 GOPCQ9HD26 462 aa19.37■□□□□ 0.69
CCDC90B-202ENST00000455220 FAM217BQ9NTX9 383 aaPredicted RBP19.37■□□□□ 0.69
CCDC90B-202ENST00000455220 NAP1L2Q9ULW6 460 aaPredicted RBP19.37■□□□□ 0.69
CCDC90B-202ENST00000455220 GOLGA8AA7E2F4 631 aa19.36■□□□□ 0.69
CCDC90B-202ENST00000455220 NDUFB10O96000 172 aa19.36■□□□□ 0.69
CCDC90B-202ENST00000455220 STK3Q13188 491 aa19.36■□□□□ 0.69
CCDC90B-202ENST00000455220 PPIL2Q13356 520 aa19.36■□□□□ 0.69
CCDC90B-202ENST00000455220 CUL4AQ13619 759 aa19.36■□□□□ 0.69
CCDC90B-202ENST00000455220 SAPCD2Q86UD0 394 aa19.36■□□□□ 0.69
CCDC90B-202ENST00000455220 NUP133Q8WUM0 1156 aa19.36■□□□□ 0.69
CCDC90B-202ENST00000455220 DCAF4Q8WV16 495 aa19.36■□□□□ 0.69
CCDC90B-202ENST00000455220 SLC10A4Q96EP9 437 aa19.36■□□□□ 0.69
CCDC90B-202ENST00000455220 GMCL1Q96IK5 515 aa19.36■□□□□ 0.69
CCDC90B-202ENST00000455220 FEZ1Q99689 392 aa19.36■□□□□ 0.69
CCDC90B-202ENST00000455220 C19orf81C9J6K1 198 aa19.36■□□□□ 0.69
CCDC90B-202ENST00000455220 USP14P54578 494 aa19.36■□□□□ 0.69
CCDC90B-202ENST00000455220 HUNKP57058 714 aa19.36■□□□□ 0.69
CCDC90B-202ENST00000455220 MTMR2Q13614 643 aa19.36■□□□□ 0.69
CCDC90B-202ENST00000455220 SLFN13Q68D06 897 aa19.36■□□□□ 0.69
CCDC90B-202ENST00000455220 RASGRP2Q7LDG7 609 aa19.36■□□□□ 0.69
CCDC90B-202ENST00000455220 CTCFLQ8NI51 663 aaPredicted RBP19.36■□□□□ 0.69
CCDC90B-202ENST00000455220 OPTNQ96CV9 577 aa19.36■□□□□ 0.69
CCDC90B-202ENST00000455220 OTUD5Q96G74 571 aa19.36■□□□□ 0.69
CCDC90B-202ENST00000455220 C12orf42Q96LP6 360 aa19.36■□□□□ 0.69
CCDC90B-202ENST00000455220 KCNH4Q9UQ05 1017 aa19.36■□□□□ 0.69
CCDC90B-202ENST00000455220 PALM3A6NDB9 673 aaPredicted RBP19.35■□□□□ 0.69
CCDC90B-202ENST00000455220 TRIM75PA6NK02 468 aa19.35■□□□□ 0.69
CCDC90B-202ENST00000455220 TMEM88BA6NKF7 163 aa19.35■□□□□ 0.69
CCDC90B-202ENST00000455220 IRF6O14896 467 aa19.35■□□□□ 0.69
CCDC90B-202ENST00000455220 CDC27P30260 824 aa19.35■□□□□ 0.69
CCDC90B-202ENST00000455220 CCT2P78371 535 aaKnown RBP19.35■□□□□ 0.69
CCDC90B-202ENST00000455220 RTN1Q16799 776 aa19.35■□□□□ 0.69
CCDC90B-202ENST00000455220 SH3D19Q5HYK7 790 aa19.35■□□□□ 0.69
CCDC90B-202ENST00000455220 KIAA1755Q5JYT7 1200 aa19.35■□□□□ 0.69
CCDC90B-202ENST00000455220 NECAB1Q8N987 351 aa19.35■□□□□ 0.69
CCDC90B-202ENST00000455220 LPAR1Q92633 364 aa19.35■□□□□ 0.69
CCDC90B-202ENST00000455220 RBM28Q9NW13 759 aaKnown RBP19.35■□□□□ 0.69
CCDC90B-202ENST00000455220 MAD2L2Q9UI95 211 aa19.35■□□□□ 0.69
CCDC90B-202ENST00000455220 TLL2Q9Y6L7 1015 aa19.35■□□□□ 0.69
CCDC90B-202ENST00000455220 CCDC196A0A1B0GTZ2 297 aa19.34■□□□□ 0.69
CCDC90B-202ENST00000455220 CXCL11O14625 94 aa19.34■□□□□ 0.69
CCDC90B-202ENST00000455220 KIF5BP33176 963 aa19.34■□□□□ 0.69
CCDC90B-202ENST00000455220 GJA5P36382 358 aa19.34■□□□□ 0.69
CCDC90B-202ENST00000455220 ASPRV1Q53RT3 343 aa19.34■□□□□ 0.69
CCDC90B-202ENST00000455220 USP17L2Q6R6M4 530 aa19.34■□□□□ 0.69
CCDC90B-202ENST00000455220 CCDC83Q8IWF9 413 aa19.34■□□□□ 0.69
CCDC90B-202ENST00000455220 CCDC144CPQ8IYA2 1237 aa19.34■□□□□ 0.69
CCDC90B-202ENST00000455220 NCOA5Q9HCD5 579 aaKnown RBP19.34■□□□□ 0.69
CCDC90B-202ENST00000455220 EMILIN3Q9NT22 766 aa19.34■□□□□ 0.69
CCDC90B-202ENST00000455220 PARP1P09874 1014 aaKnown RBP19.33■□□□□ 0.69
CCDC90B-202ENST00000455220 ADD1P35611 737 aaKnown RBP19.33■□□□□ 0.69
CCDC90B-202ENST00000455220 SLC1A4P43007 532 aa19.33■□□□□ 0.69
CCDC90B-202ENST00000455220 ZNF543Q08ER8 600 aa19.33■□□□□ 0.69
CCDC90B-202ENST00000455220 ZYXQ15942 572 aaKnown RBP19.33■□□□□ 0.69
CCDC90B-202ENST00000455220 GPATCH4Q5T3I0 446 aaKnown RBP19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms