RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 DDX41Q9UJV9 622 aaKnown RBP8.62□□□□□ -1.03
RIF1-206ENST00000453091 GNAQP50148 359 aa8.62□□□□□ -1.03
RIF1-206ENST00000453091 STXBP4Q6ZWJ1 553 aa8.62□□□□□ -1.03
RIF1-206ENST00000453091 PUS7LQ9H0K6 701 aaKnown RBP8.62□□□□□ -1.03
RIF1-206ENST00000453091 EIF2AK4Q9P2K8 1649 aaKnown RBP8.62□□□□□ -1.03
RIF1-206ENST00000453091 KCNK3O14649 394 aa8.62□□□□□ -1.03
RIF1-206ENST00000453091 CMA1P23946 247 aa8.62□□□□□ -1.03
RIF1-206ENST00000453091 E2F4Q16254 413 aa8.62□□□□□ -1.03
RIF1-206ENST00000453091 LONRF2Q1L5Z9 754 aa8.62□□□□□ -1.03
RIF1-206ENST00000453091 LRRC47Q8N1G4 583 aaKnown RBP8.62□□□□□ -1.03
RIF1-206ENST00000453091 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.62□□□□□ -1.03
RIF1-206ENST00000453091 ARID4AP29374 1257 aaPredicted RBP8.62□□□□□ -1.03
RIF1-206ENST00000453091 TBC1D31Q96DN5 1066 aa8.62□□□□□ -1.03
RIF1-206ENST00000453091 KIF2CQ99661 725 aa8.62□□□□□ -1.03
RIF1-206ENST00000453091 MAST3O60307 1309 aa8.62□□□□□ -1.03
RIF1-206ENST00000453091 DNMT1P26358 1616 aaKnown RBP8.62□□□□□ -1.03
RIF1-206ENST00000453091 SASH1O94885 1247 aa8.62□□□□□ -1.03
RIF1-206ENST00000453091 SLC7A5Q01650 507 aa8.62□□□□□ -1.03
RIF1-206ENST00000453091 BCAS4Q8TDM0 211 aa8.62□□□□□ -1.03
RIF1-206ENST00000453091 MAN1B1Q9UKM7 699 aa8.62□□□□□ -1.03
RIF1-206ENST00000453091 TCP10L2B9ZVM9 353 aa8.62□□□□□ -1.03
RIF1-206ENST00000453091 SRGAP2O75044 1071 aa8.62□□□□□ -1.03
RIF1-206ENST00000453091 MOCS3O95396 460 aa8.62□□□□□ -1.03
RIF1-206ENST00000453091 POLR2FP61218 127 aaKnown RBP8.62□□□□□ -1.03
RIF1-206ENST00000453091 CALCOCO2Q13137 446 aa8.62□□□□□ -1.03
RIF1-206ENST00000453091 TCIRG1Q13488 830 aa8.62□□□□□ -1.03
RIF1-206ENST00000453091 NONOQ15233 471 aaKnown RBP eCLIP8.62□□□□□ -1.03
RIF1-206ENST00000453091 NKX1-1Q15270 411 aaPredicted RBP8.62□□□□□ -1.03
RIF1-206ENST00000453091 E2F5Q15329 346 aa8.62□□□□□ -1.03
RIF1-206ENST00000453091 TMCO4Q5TGY1 634 aa8.62□□□□□ -1.03
RIF1-206ENST00000453091 PI4K2BQ8TCG2 481 aa8.62□□□□□ -1.03
RIF1-206ENST00000453091 TSGA10Q9BZW7 698 aa8.62□□□□□ -1.03
RIF1-206ENST00000453091 EHMT1Q9H9B1 1298 aa8.62□□□□□ -1.03
RIF1-206ENST00000453091 ROBO2Q9HCK4 1378 aa8.62□□□□□ -1.03
RIF1-206ENST00000453091 RRP15Q9Y3B9 282 aaKnown RBP8.62□□□□□ -1.03
RIF1-206ENST00000453091 TNKSO95271 1327 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 SPDYE3A6NKU9 549 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 CCDC169A6NNP5 214 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 PDE6BP35913 854 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 PLCD1P51178 756 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 RBM17Q96I25 401 aaKnown RBP8.61□□□□□ -1.03
RIF1-206ENST00000453091 SPTLC3Q9NUV7 552 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 PCDHB13Q9Y5F0 798 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 EFCAB8A8MWE9 144 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 ZNF131P52739 623 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 NBPF14Q5TI25 921 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 INTS8Q75QN2 995 aaKnown RBP8.61□□□□□ -1.03
RIF1-206ENST00000453091 SLAIN2Q9P270 581 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 EIF4E1BA6NMX2 242 aaKnown RBP8.61□□□□□ -1.03
RIF1-206ENST00000453091 FOXN1O15353 648 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 KRT71Q3SY84 523 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 ABCB6Q9NP58 842 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 DENND2AQ9ULE3 1009 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 RASSF7Q02833 373 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 OSBP2Q969R2 916 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 VTI1AQ96AJ9 217 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 KCNF1Q9H3M0 494 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 KIF23Q02241 960 aaPredicted RBP8.61□□□□□ -1.03
RIF1-206ENST00000453091 BIRC3Q13489 604 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 SFMBT2Q5VUG0 894 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 GINS2Q9Y248 185 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 PCDHB6Q9Y5E3 794 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 RPSAP08865 295 aaKnown RBP8.61□□□□□ -1.03
RIF1-206ENST00000453091 DESP17661 470 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 IFT20Q8IY31 132 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 ZNF274Q96GC6 653 aaPredicted RBP8.61□□□□□ -1.03
RIF1-206ENST00000453091 KRT12Q99456 494 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 HAUS7Q99871 368 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 CCDC77Q9BR77 488 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 MTRF1LQ9UGC7 380 aaKnown RBP8.61□□□□□ -1.03
RIF1-206ENST00000453091 STAP2Q9UGK3 403 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 SRP68Q9UHB9 627 aaKnown RBP8.61□□□□□ -1.03
RIF1-206ENST00000453091 ZMYM6O95789 1325 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 FTCDO95954 541 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 PDE6AP16499 860 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 CTNNA1P35221 906 aaKnown RBP8.61□□□□□ -1.03
RIF1-206ENST00000453091 CYP27A1Q02318 531 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 C6orf163Q5TEZ5 329 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 ZNF354CQ86Y25 554 aa8.61□□□□□ -1.03
RIF1-206ENST00000453091 EIF4G3O43432 1585 aaKnown RBP8.6□□□□□ -1.03
RIF1-206ENST00000453091 KDRP35968 1356 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 KIAA0232Q92628 1395 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 PRR29P0C7W0 189 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 ACTN2P35609 894 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 CHRNDQ07001 517 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 TOB2Q14106 344 aaPredicted RBP8.6□□□□□ -1.03
RIF1-206ENST00000453091 SLC9C1Q4G0N8 1177 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 TRIM68Q6AZZ1 485 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 CCDC65Q8IXS2 484 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 CCDC97Q96F63 343 aaPredicted RBP8.6□□□□□ -1.03
RIF1-206ENST00000453091 CAPS2Q9BXY5 557 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 ASIC3Q9UHC3 531 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 COMMD10Q9Y6G5 202 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 PLEKHG3A1L390 1219 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 COPB1P53618 953 aaKnown RBP8.6□□□□□ -1.03
RIF1-206ENST00000453091 EPHA10Q5JZY3 1008 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 CNNM4Q6P4Q7 775 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 ABCC2Q92887 1545 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 TMEM2Q9UHN6 1383 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 EPB41P11171 864 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms