RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 DGKHQ86XP1 1220 aa17.16■□□□□ 0.34
TRAPPC12-211ENST00000452495 IFNL1Q8IU54 200 aa17.16■□□□□ 0.34
TRAPPC12-211ENST00000452495 RASEFQ8IZ41 740 aa17.16■□□□□ 0.34
TRAPPC12-211ENST00000452495 JMYQ8N9B5 988 aa17.16■□□□□ 0.34
TRAPPC12-211ENST00000452495 TTC14Q96N46 770 aa17.16■□□□□ 0.34
TRAPPC12-211ENST00000452495 ZSCAN10Q96SZ4 725 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC12-211ENST00000452495 VCPKMTQ9H867 229 aa17.16■□□□□ 0.34
TRAPPC12-211ENST00000452495 STX8Q9UNK0 236 aa17.16■□□□□ 0.34
TRAPPC12-211ENST00000452495 AGTPBP1Q9UPW5 1226 aa17.16■□□□□ 0.34
TRAPPC12-211ENST00000452495 SLC45A1Q9Y2W3 748 aa17.16■□□□□ 0.34
TRAPPC12-211ENST00000452495 SNX14Q9Y5W7 946 aa17.16■□□□□ 0.34
TRAPPC12-211ENST00000452495 COL11A1P12107 1806 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC12-211ENST00000452495 SEC24BO95487 1268 aa17.15■□□□□ 0.34
TRAPPC12-211ENST00000452495 ALDH1A1P00352 501 aa17.15■□□□□ 0.34
TRAPPC12-211ENST00000452495 MCM5P33992 734 aa17.15■□□□□ 0.34
TRAPPC12-211ENST00000452495 ANAPC15P60006 121 aa17.15■□□□□ 0.34
TRAPPC12-211ENST00000452495 ZYXQ15942 572 aaKnown RBP17.15■□□□□ 0.34
TRAPPC12-211ENST00000452495 GADL1Q6ZQY3 521 aa17.15■□□□□ 0.34
TRAPPC12-211ENST00000452495 CYB5R4Q7L1T6 521 aa17.15■□□□□ 0.34
TRAPPC12-211ENST00000452495 GMCL1P1Q8NEA9 526 aa17.15■□□□□ 0.34
TRAPPC12-211ENST00000452495 NKX2-3Q8TAU0 364 aa17.15■□□□□ 0.34
TRAPPC12-211ENST00000452495 NEK1Q96PY6 1258 aa17.15■□□□□ 0.34
TRAPPC12-211ENST00000452495 CLIP2Q9UDT6 1046 aa17.15■□□□□ 0.34
TRAPPC12-211ENST00000452495 ERICH2A1L162 156 aa17.14■□□□□ 0.33
TRAPPC12-211ENST00000452495 BTBD19C9JJ37 291 aa17.14■□□□□ 0.33
TRAPPC12-211ENST00000452495 IGF2BP3O00425 579 aaKnown RBP eCLIP17.14■□□□□ 0.33
TRAPPC12-211ENST00000452495 TOP1P11387 765 aaKnown RBP17.14■□□□□ 0.33
TRAPPC12-211ENST00000452495 PABPC4Q13310 644 aaKnown RBP eCLIP17.14■□□□□ 0.33
TRAPPC12-211ENST00000452495 ENAHQ8N8S7 591 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC12-211ENST00000452495 TMEM87BQ96K49 555 aa17.14■□□□□ 0.33
TRAPPC12-211ENST00000452495 UPF2Q9HAU5 1272 aaKnown RBP17.14■□□□□ 0.33
TRAPPC12-211ENST00000452495 EMILIN3Q9NT22 766 aa17.14■□□□□ 0.33
TRAPPC12-211ENST00000452495 PNMA3Q9UL41 463 aa17.14■□□□□ 0.33
TRAPPC12-211ENST00000452495 WDR46O15213 610 aaKnown RBP17.13■□□□□ 0.33
TRAPPC12-211ENST00000452495 CA12O43570 354 aa17.13■□□□□ 0.33
TRAPPC12-211ENST00000452495 PRC1O43663 620 aa17.13■□□□□ 0.33
TRAPPC12-211ENST00000452495 VCAM1P19320 739 aa17.13■□□□□ 0.33
TRAPPC12-211ENST00000452495 PSMA5P28066 241 aa17.13■□□□□ 0.33
TRAPPC12-211ENST00000452495 ANTXR2P58335 489 aa17.13■□□□□ 0.33
TRAPPC12-211ENST00000452495 SEC23AQ15436 765 aa17.13■□□□□ 0.33
TRAPPC12-211ENST00000452495 ADCK5Q3MIX3 580 aa17.13■□□□□ 0.33
TRAPPC12-211ENST00000452495 RCSD1Q6JBY9 416 aa17.13■□□□□ 0.33
TRAPPC12-211ENST00000452495 GPAT2Q6NUI2 795 aa17.13■□□□□ 0.33
TRAPPC12-211ENST00000452495 LRRC47Q8N1G4 583 aaKnown RBP17.13■□□□□ 0.33
TRAPPC12-211ENST00000452495 FAM43AQ8N2R8 423 aa17.13■□□□□ 0.33
TRAPPC12-211ENST00000452495 ANKS1AQ92625 1134 aa17.13■□□□□ 0.33
TRAPPC12-211ENST00000452495 IL17RAQ96F46 866 aa17.13■□□□□ 0.33
TRAPPC12-211ENST00000452495 JAKMIP1Q96N16 626 aaKnown RBP17.13■□□□□ 0.33
TRAPPC12-211ENST00000452495 PTPN18Q99952 460 aa17.13■□□□□ 0.33
TRAPPC12-211ENST00000452495 ZKSCAN3Q9BRR0 538 aa17.13■□□□□ 0.33
TRAPPC12-211ENST00000452495 SAGE1Q9NXZ1 904 aa17.13■□□□□ 0.33
TRAPPC12-211ENST00000452495 MYH6P13533 1939 aa17.12■□□□□ 0.33
TRAPPC12-211ENST00000452495 TREML2Q5T2D2 321 aa17.12■□□□□ 0.33
TRAPPC12-211ENST00000452495 IFIT1BQ5T764 474 aaKnown RBP17.12■□□□□ 0.33
TRAPPC12-211ENST00000452495 BLOC1S2Q6QNY1 142 aa17.12■□□□□ 0.33
TRAPPC12-211ENST00000452495 DHX32Q7L7V1 743 aaKnown RBP17.12■□□□□ 0.33
TRAPPC12-211ENST00000452495 PARK7Q99497 189 aaKnown RBP17.12■□□□□ 0.33
TRAPPC12-211ENST00000452495 TMEM47Q9BQJ4 181 aa17.12■□□□□ 0.33
TRAPPC12-211ENST00000452495 BEGAINQ9BUH8 593 aa17.12■□□□□ 0.33
TRAPPC12-211ENST00000452495 CFHR5Q9BXR6 569 aa17.12■□□□□ 0.33
TRAPPC12-211ENST00000452495 TM6SF1Q9BZW5 370 aa17.12■□□□□ 0.33
TRAPPC12-211ENST00000452495 MGAMO43451 1857 aa17.12■□□□□ 0.33
TRAPPC12-211ENST00000452495 F5H6K3 240 aa17.11■□□□□ 0.33
TRAPPC12-211ENST00000452495 PDHXO00330 501 aa17.11■□□□□ 0.33
TRAPPC12-211ENST00000452495 IFIT3O14879 490 aaKnown RBP17.11■□□□□ 0.33
TRAPPC12-211ENST00000452495 NDUFB10O96000 172 aa17.11■□□□□ 0.33
TRAPPC12-211ENST00000452495 HOXA7P31268 230 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC12-211ENST00000452495 KLRC3Q07444 240 aa17.11■□□□□ 0.33
TRAPPC12-211ENST00000452495 DGKZQ13574 1117 aa17.11■□□□□ 0.33
TRAPPC12-211ENST00000452495 WTAPQ15007 396 aa17.11■□□□□ 0.33
TRAPPC12-211ENST00000452495 GMCL1Q96IK5 515 aa17.11■□□□□ 0.33
TRAPPC12-211ENST00000452495 KAT14Q9H8E8 782 aa17.11■□□□□ 0.33
TRAPPC12-211ENST00000452495 USP17L15C9J2P7 530 aa17.1■□□□□ 0.33
TRAPPC12-211ENST00000452495 USP17L13C9JLJ4 530 aa17.1■□□□□ 0.33
TRAPPC12-211ENST00000452495 USP17L11C9JVI0 530 aa17.1■□□□□ 0.33
TRAPPC12-211ENST00000452495 USP17L18D6R9N7 530 aa17.1■□□□□ 0.33
TRAPPC12-211ENST00000452495 USP17L22D6RA61 530 aa17.1■□□□□ 0.33
TRAPPC12-211ENST00000452495 USP17L17D6RBQ6 530 aa17.1■□□□□ 0.33
TRAPPC12-211ENST00000452495 USP17L19D6RCP7 530 aa17.1■□□□□ 0.33
TRAPPC12-211ENST00000452495 USP17L20D6RJB6 530 aa17.1■□□□□ 0.33
TRAPPC12-211ENST00000452495 CASTP20810 708 aaKnown RBP17.1■□□□□ 0.33
TRAPPC12-211ENST00000452495 OSBPP22059 807 aa17.1■□□□□ 0.33
TRAPPC12-211ENST00000452495 IRX3P78415 501 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC12-211ENST00000452495 USP17L24Q0WX57 530 aa17.1■□□□□ 0.33
TRAPPC12-211ENST00000452495 TMEM67Q5HYA8 995 aa17.1■□□□□ 0.33
TRAPPC12-211ENST00000452495 SLFN13Q68D06 897 aa17.1■□□□□ 0.33
TRAPPC12-211ENST00000452495 SPICE1Q8N0Z3 855 aa17.1■□□□□ 0.33
TRAPPC12-211ENST00000452495 PNMA1Q8ND90 353 aa17.1■□□□□ 0.33
TRAPPC12-211ENST00000452495 DCAF4Q8WV16 495 aa17.1■□□□□ 0.33
TRAPPC12-211ENST00000452495 BACH2Q9BYV9 841 aa17.1■□□□□ 0.33
TRAPPC12-211ENST00000452495 RPAP3Q9H6T3 665 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC12-211ENST00000452495 WBP1LQ9NX94 342 aa17.1■□□□□ 0.33
TRAPPC12-211ENST00000452495 SH2B2O14492 632 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC12-211ENST00000452495 RAD21O60216 631 aa17.09■□□□□ 0.33
TRAPPC12-211ENST00000452495 LIFRP42702 1097 aa17.09■□□□□ 0.33
TRAPPC12-211ENST00000452495 RBM25P49756 843 aaKnown RBP17.09■□□□□ 0.33
TRAPPC12-211ENST00000452495 EXOSC10Q01780 885 aaKnown RBP17.09■□□□□ 0.33
TRAPPC12-211ENST00000452495 TAF1CQ15572 869 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC12-211ENST00000452495 KIAA1755Q5JYT7 1200 aa17.09■□□□□ 0.33
TRAPPC12-211ENST00000452495 CHST3Q7LGC8 479 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms