RNA–Protein interactions for RNA: ENST00000451943.6

DDB1-203, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,224 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-203ENST00000451943 SHC4Q6S5L8 630 aa9.88□□□□□ -0.83
DDB1-203ENST00000451943 TEX11Q8IYF3 940 aa9.88□□□□□ -0.83
DDB1-203ENST00000451943 ZNF444Q8N0Y2 327 aaPredicted RBP9.88□□□□□ -0.83
DDB1-203ENST00000451943 CMTR1Q8N1G2 835 aaKnown RBP9.88□□□□□ -0.83
DDB1-203ENST00000451943 SRBD1Q8N5C6 995 aaKnown RBP9.88□□□□□ -0.83
DDB1-203ENST00000451943 TNFRSF25Q93038 417 aa9.88□□□□□ -0.83
DDB1-203ENST00000451943 SHISA4Q96DD7 197 aa9.88□□□□□ -0.83
DDB1-203ENST00000451943 EYA3Q99504 573 aa9.88□□□□□ -0.83
DDB1-203ENST00000451943 MRIQ9BWK5 157 aa9.88□□□□□ -0.83
DDB1-203ENST00000451943 ZC3H12CQ9C0D7 883 aaKnown RBP9.88□□□□□ -0.83
DDB1-203ENST00000451943 KAT14Q9H8E8 782 aa9.88□□□□□ -0.83
DDB1-203ENST00000451943 MKNK2Q9HBH9 465 aa9.88□□□□□ -0.83
DDB1-203ENST00000451943 RTN4Q9NQC3 1192 aaKnown RBP9.88□□□□□ -0.83
DDB1-203ENST00000451943 SH3GLB2Q9NR46 395 aa9.88□□□□□ -0.83
DDB1-203ENST00000451943 KIAA1468Q9P260 1216 aa9.88□□□□□ -0.83
DDB1-203ENST00000451943 KCNJ14Q9UNX9 436 aa9.88□□□□□ -0.83
DDB1-203ENST00000451943 ZKSCAN5Q9Y2L8 839 aa9.88□□□□□ -0.83
DDB1-203ENST00000451943 V9GY48 417 aaPredicted RBP9.88□□□□□ -0.83
DDB1-203ENST00000451943 COL11A2P13942 1736 aaPredicted RBP9.87□□□□□ -0.83
DDB1-203ENST00000451943 FLT1P17948 1338 aa9.87□□□□□ -0.83
DDB1-203ENST00000451943 AP5Z1O43299 807 aa9.87□□□□□ -0.83
DDB1-203ENST00000451943 NMT2O60551 498 aa9.87□□□□□ -0.83
DDB1-203ENST00000451943 TPM3P06753 285 aa9.87□□□□□ -0.83
DDB1-203ENST00000451943 SMARCA1P28370 1054 aa9.87□□□□□ -0.83
DDB1-203ENST00000451943 MARCKSP29966 332 aaPredicted RBP9.87□□□□□ -0.83
DDB1-203ENST00000451943 CDK8P49336 464 aa9.87□□□□□ -0.83
DDB1-203ENST00000451943 PLCD1P51178 756 aa9.87□□□□□ -0.83
DDB1-203ENST00000451943 GTF2IP78347 998 aa9.87□□□□□ -0.83
DDB1-203ENST00000451943 NPY5RQ15761 445 aa9.87□□□□□ -0.83
DDB1-203ENST00000451943 PFKFB3Q16875 520 aaPredicted RBP9.87□□□□□ -0.83
DDB1-203ENST00000451943 DPY19L2Q6NUT2 758 aa9.87□□□□□ -0.83
DDB1-203ENST00000451943 SARM1Q6SZW1 724 aa9.87□□□□□ -0.83
DDB1-203ENST00000451943 HHIPL2Q6UWX4 724 aa9.87□□□□□ -0.83
DDB1-203ENST00000451943 DPP8Q6V1X1 898 aaPredicted RBP9.87□□□□□ -0.83
DDB1-203ENST00000451943 PODNQ7Z5L7 613 aa9.87□□□□□ -0.83
DDB1-203ENST00000451943 CCDC82Q8N4S0 544 aa9.87□□□□□ -0.83
DDB1-203ENST00000451943 KRI1Q8N9T8 703 aaKnown RBP9.87□□□□□ -0.83
DDB1-203ENST00000451943 PNMA1Q8ND90 353 aa9.87□□□□□ -0.83
DDB1-203ENST00000451943 NEDD1Q8NHV4 660 aa9.87□□□□□ -0.83
DDB1-203ENST00000451943 DYNLL2Q96FJ2 89 aa9.87□□□□□ -0.83
DDB1-203ENST00000451943 BPIFA3Q9BQP9 254 aa9.87□□□□□ -0.83
DDB1-203ENST00000451943 LZTS2Q9BRK4 669 aa9.87□□□□□ -0.83
DDB1-203ENST00000451943 SDF4Q9BRK5 362 aa9.87□□□□□ -0.83
DDB1-203ENST00000451943 TMX4Q9H1E5 349 aaPredicted RBP9.87□□□□□ -0.83
DDB1-203ENST00000451943 DNAJC25Q9H1X3 360 aa9.87□□□□□ -0.83
DDB1-203ENST00000451943 BRMS1Q9HCU9 246 aa9.87□□□□□ -0.83
DDB1-203ENST00000451943 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.87□□□□□ -0.83
DDB1-203ENST00000451943 FBXO2Q9UK22 296 aaPredicted RBP9.87□□□□□ -0.83
DDB1-203ENST00000451943 TAOK2Q9UL54 1235 aa9.87□□□□□ -0.83
DDB1-203ENST00000451943 DAGLAQ9Y4D2 1042 aa9.87□□□□□ -0.83
DDB1-203ENST00000451943 SRPRBQ9Y5M8 271 aaKnown RBP9.87□□□□□ -0.83
DDB1-203ENST00000451943 SNED1Q8TER0 1413 aa9.87□□□□□ -0.83
DDB1-203ENST00000451943 PLIN4Q96Q06 1357 aa9.87□□□□□ -0.83
DDB1-203ENST00000451943 MYO3BQ8WXR4 1341 aa9.86□□□□□ -0.83
DDB1-203ENST00000451943 TSPY3P0CV98 308 aa9.86□□□□□ -0.83
DDB1-203ENST00000451943 TSPY8P0CW00 308 aa9.86□□□□□ -0.83
DDB1-203ENST00000451943 SCG2P13521 617 aa9.86□□□□□ -0.83
DDB1-203ENST00000451943 MSNP26038 577 aaKnown RBP9.86□□□□□ -0.83
DDB1-203ENST00000451943 SYKP43405 635 aa9.86□□□□□ -0.83
DDB1-203ENST00000451943 TRAPPC10P48553 1259 aa9.86□□□□□ -0.83
DDB1-203ENST00000451943 HTRA3P83110 453 aa9.86□□□□□ -0.83
DDB1-203ENST00000451943 NR5A1Q13285 461 aa9.86□□□□□ -0.83
DDB1-203ENST00000451943 SOGA3Q5TF21 947 aa9.86□□□□□ -0.83
DDB1-203ENST00000451943 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.86□□□□□ -0.83
DDB1-203ENST00000451943 LUZP1Q86V48 1076 aa9.86□□□□□ -0.83
DDB1-203ENST00000451943 MAPKAPK5Q8IW41 473 aa9.86□□□□□ -0.83
DDB1-203ENST00000451943 SMC1BQ8NDV3 1235 aa9.86□□□□□ -0.83
DDB1-203ENST00000451943 OXER1Q8TDS5 423 aa9.86□□□□□ -0.83
DDB1-203ENST00000451943 TAOK3Q9H2K8 898 aa9.86□□□□□ -0.83
DDB1-203ENST00000451943 VPS54Q9P1Q0 977 aa9.86□□□□□ -0.83
DDB1-203ENST00000451943 TUBE1Q9UJT0 475 aa9.86□□□□□ -0.83
DDB1-203ENST00000451943 CDK5RAP2Q96SN8 1893 aa9.85□□□□□ -0.83
DDB1-203ENST00000451943 FOCADQ5VW36 1801 aa9.85□□□□□ -0.83
DDB1-203ENST00000451943 PALM3A6NDB9 673 aaPredicted RBP9.85□□□□□ -0.83
DDB1-203ENST00000451943 TRIM75PA6NK02 468 aa9.85□□□□□ -0.83
DDB1-203ENST00000451943 CALML3P27482 149 aa9.85□□□□□ -0.83
DDB1-203ENST00000451943 CDC25BP30305 580 aa9.85□□□□□ -0.83
DDB1-203ENST00000451943 NLRP12P59046 1061 aa9.85□□□□□ -0.83
DDB1-203ENST00000451943 HDLBPQ00341 1268 aaKnown RBP9.85□□□□□ -0.83
DDB1-203ENST00000451943 GABPAQ06546 454 aa9.85□□□□□ -0.83
DDB1-203ENST00000451943 GALNT17Q6IS24 598 aa9.85□□□□□ -0.83
DDB1-203ENST00000451943 C11orf57Q6ZUT1 292 aaPredicted RBP9.85□□□□□ -0.83
DDB1-203ENST00000451943 PLA2G4DQ86XP0 818 aa9.85□□□□□ -0.83
DDB1-203ENST00000451943 CEP57L1Q8IYX8 460 aa9.85□□□□□ -0.83
DDB1-203ENST00000451943 CERS5Q8N5B7 392 aa9.85□□□□□ -0.83
DDB1-203ENST00000451943 TMEM47Q9BQJ4 181 aa9.85□□□□□ -0.83
DDB1-203ENST00000451943 NAT10Q9H0A0 1025 aaKnown RBP9.85□□□□□ -0.83
DDB1-203ENST00000451943 CABP5Q9NP86 173 aa9.85□□□□□ -0.83
DDB1-203ENST00000451943 MAD2L2Q9UI95 211 aa9.85□□□□□ -0.83
DDB1-203ENST00000451943 PCDHB6Q9Y5E3 794 aa9.85□□□□□ -0.83
DDB1-203ENST00000451943 USP17L3A6NCW0 530 aa9.84□□□□□ -0.83
DDB1-203ENST00000451943 USP17L4A6NCW7 530 aa9.84□□□□□ -0.83
DDB1-203ENST00000451943 GOLGA6L6A8MZA4 724 aa9.84□□□□□ -0.83
DDB1-203ENST00000451943 RIMBP2O15034 1052 aa9.84□□□□□ -0.83
DDB1-203ENST00000451943 PTMAP06454 111 aaKnown RBP9.84□□□□□ -0.83
DDB1-203ENST00000451943 CC2D2BQ6DHV5 1058 aa9.84□□□□□ -0.83
DDB1-203ENST00000451943 OLFM4Q6UX06 510 aa9.84□□□□□ -0.83
DDB1-203ENST00000451943 KRBA2Q6ZNG9 492 aa9.84□□□□□ -0.83
DDB1-203ENST00000451943 USP17L1Q7RTZ2 530 aa9.84□□□□□ -0.83
DDB1-203ENST00000451943 DAGLBQ8NCG7 672 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms