RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 LRRC2Q9BYS8 371 aa28.29■■■□□ 2.12
CPSF4-207ENST00000451876 VCPKMTQ9H867 229 aa28.29■■■□□ 2.12
CPSF4-207ENST00000451876 SENP2Q9HC62 589 aa28.29■■■□□ 2.12
CPSF4-207ENST00000451876 GPHNQ9NQX3 736 aaPredicted RBP28.29■■■□□ 2.12
CPSF4-207ENST00000451876 CASTP20810 708 aaKnown RBP28.29■■■□□ 2.12
CPSF4-207ENST00000451876 USP14P54578 494 aa28.29■■■□□ 2.12
CPSF4-207ENST00000451876 ANAPC15P60006 121 aa28.29■■■□□ 2.12
CPSF4-207ENST00000451876 SREBF2Q12772 1141 aa28.29■■■□□ 2.12
CPSF4-207ENST00000451876 GPAT2Q6NUI2 795 aa28.29■■■□□ 2.12
CPSF4-207ENST00000451876 RASGRP2Q7LDG7 609 aa28.29■■■□□ 2.12
CPSF4-207ENST00000451876 SPICE1Q8N0Z3 855 aa28.29■■■□□ 2.12
CPSF4-207ENST00000451876 PROCA1Q8NCQ7 364 aaPredicted RBP28.29■■■□□ 2.12
CPSF4-207ENST00000451876 C12orf42Q96LP6 360 aa28.29■■■□□ 2.12
CPSF4-207ENST00000451876 TTC14Q96N46 770 aa28.29■■■□□ 2.12
CPSF4-207ENST00000451876 PARP14Q460N5 1801 aa28.28■■■□□ 2.12
CPSF4-207ENST00000451876 IFIT3O14879 490 aaKnown RBP28.28■■■□□ 2.12
CPSF4-207ENST00000451876 TM4SF4P48230 202 aa28.28■■■□□ 2.12
CPSF4-207ENST00000451876 EXOSC10Q01780 885 aaKnown RBP28.28■■■□□ 2.12
CPSF4-207ENST00000451876 PPP4R3BQ5MIZ7 849 aa28.28■■■□□ 2.12
CPSF4-207ENST00000451876 DHX32Q7L7V1 743 aaKnown RBP28.28■■■□□ 2.12
CPSF4-207ENST00000451876 FAM43AQ8N2R8 423 aa28.28■■■□□ 2.12
CPSF4-207ENST00000451876 IGDCC4Q8TDY8 1250 aa28.28■■■□□ 2.12
CPSF4-207ENST00000451876 C22orf23Q9BZE7 217 aa28.28■■■□□ 2.12
CPSF4-207ENST00000451876 TMOD4Q9NZQ9 345 aa28.28■■■□□ 2.12
CPSF4-207ENST00000451876 BTBD19C9JJ37 291 aa28.27■■■□□ 2.12
CPSF4-207ENST00000451876 RAD21O60216 631 aa28.27■■■□□ 2.12
CPSF4-207ENST00000451876 TOP1P11387 765 aaKnown RBP28.27■■■□□ 2.12
CPSF4-207ENST00000451876 VCAM1P19320 739 aa28.27■■■□□ 2.12
CPSF4-207ENST00000451876 BLOC1S2Q6QNY1 142 aa28.27■■■□□ 2.12
CPSF4-207ENST00000451876 FASTKD5Q7L8L6 764 aaKnown RBP28.27■■■□□ 2.12
CPSF4-207ENST00000451876 IFNL1Q8IU54 200 aa28.27■■■□□ 2.12
CPSF4-207ENST00000451876 ANKS1AQ92625 1134 aa28.27■■■□□ 2.12
CPSF4-207ENST00000451876 F5H6K3 240 aa28.26■■■□□ 2.11
CPSF4-207ENST00000451876 HMGB1P09429 215 aaKnown RBP28.26■■■□□ 2.11
CPSF4-207ENST00000451876 INHBEP58166 350 aa28.26■■■□□ 2.11
CPSF4-207ENST00000451876 KLRC3Q07444 240 aa28.26■■■□□ 2.11
CPSF4-207ENST00000451876 CCDC178Q5BJE1 867 aa28.26■■■□□ 2.11
CPSF4-207ENST00000451876 TMEM67Q5HYA8 995 aa28.26■■■□□ 2.11
CPSF4-207ENST00000451876 IL17RAQ96F46 866 aa28.26■■■□□ 2.11
CPSF4-207ENST00000451876 UPF3BQ9BZI7 483 aaKnown RBP28.26■■■□□ 2.11
CPSF4-207ENST00000451876 GOPCQ9HD26 462 aa28.26■■■□□ 2.11
CPSF4-207ENST00000451876 SYNPO2Q9UMS6 1093 aa28.26■■■□□ 2.11
CPSF4-207ENST00000451876 AGTPBP1Q9UPW5 1226 aa28.26■■■□□ 2.11
CPSF4-207ENST00000451876 NDUFB10O96000 172 aa28.25■■■□□ 2.11
CPSF4-207ENST00000451876 PSMA5P28066 241 aa28.25■■■□□ 2.11
CPSF4-207ENST00000451876 SART3Q15020 963 aaKnown RBP28.25■■■□□ 2.11
CPSF4-207ENST00000451876 IFIT1BQ5T764 474 aaKnown RBP28.25■■■□□ 2.11
CPSF4-207ENST00000451876 CHMP4CQ96CF2 233 aa28.25■■■□□ 2.11
CPSF4-207ENST00000451876 UPF2Q9HAU5 1272 aaKnown RBP28.25■■■□□ 2.11
CPSF4-207ENST00000451876 ZSWIM6Q9HCJ5 1215 aa28.25■■■□□ 2.11
CPSF4-207ENST00000451876 ERICH2A1L162 156 aa28.25■■■□□ 2.11
CPSF4-207ENST00000451876 SH2B2O14492 632 aaPredicted RBP28.25■■■□□ 2.11
CPSF4-207ENST00000451876 RPS6KB1P23443 525 aa28.25■■■□□ 2.11
CPSF4-207ENST00000451876 RBM25P49756 843 aaKnown RBP28.25■■■□□ 2.11
CPSF4-207ENST00000451876 GMCL1P1Q8NEA9 526 aa28.25■■■□□ 2.11
CPSF4-207ENST00000451876 TM6SF1Q9BZW5 370 aa28.25■■■□□ 2.11
CPSF4-207ENST00000451876 LY9Q9HBG7 655 aa28.25■■■□□ 2.11
CPSF4-207ENST00000451876 MTMR7Q9Y216 660 aa28.25■■■□□ 2.11
CPSF4-207ENST00000451876 WDR19Q8NEZ3 1342 aa28.24■■■□□ 2.11
CPSF4-207ENST00000451876 RLFQ13129 1914 aa28.24■■■□□ 2.11
CPSF4-207ENST00000451876 WTAPQ15007 396 aa28.24■■■□□ 2.11
CPSF4-207ENST00000451876 ANKRD23Q86SG2 305 aa28.24■■■□□ 2.11
CPSF4-207ENST00000451876 LPAR1Q92633 364 aa28.24■■■□□ 2.11
CPSF4-207ENST00000451876 TMEM87BQ96K49 555 aa28.24■■■□□ 2.11
CPSF4-207ENST00000451876 NUP88Q99567 741 aaPredicted RBP28.24■■■□□ 2.11
CPSF4-207ENST00000451876 RUFY3Q7L099 469 aa28.23■■■□□ 2.11
CPSF4-207ENST00000451876 REM2Q8IYK8 340 aaPredicted RBP28.23■■■□□ 2.11
CPSF4-207ENST00000451876 PNMA1Q8ND90 353 aa28.23■■■□□ 2.11
CPSF4-207ENST00000451876 MTA3Q9BTC8 594 aa28.23■■■□□ 2.11
CPSF4-207ENST00000451876 KAT14Q9H8E8 782 aa28.23■■■□□ 2.11
CPSF4-207ENST00000451876 PDHXO00330 501 aa28.22■■■□□ 2.11
CPSF4-207ENST00000451876 KIF2CQ99661 725 aa28.22■■■□□ 2.11
CPSF4-207ENST00000451876 RPAP3Q9H6T3 665 aaPredicted RBP28.22■■■□□ 2.11
CPSF4-207ENST00000451876 SLFN13Q68D06 897 aa28.21■■■□□ 2.11
CPSF4-207ENST00000451876 TBC1D32Q96NH3 1257 aa28.21■■■□□ 2.11
CPSF4-207ENST00000451876 WDR46O15213 610 aaKnown RBP28.21■■■□□ 2.11
CPSF4-207ENST00000451876 FAM83BQ5T0W9 1011 aa28.21■■■□□ 2.11
CPSF4-207ENST00000451876 CYP46A1Q9Y6A2 500 aa28.21■■■□□ 2.11
CPSF4-207ENST00000451876 Q6ZUG5 572 aa28.2■■■□□ 2.1
CPSF4-207ENST00000451876 HOXA7P31268 230 aaPredicted RBP28.19■■■□□ 2.1
CPSF4-207ENST00000451876 LIFRP42702 1097 aa28.19■■■□□ 2.1
CPSF4-207ENST00000451876 CYP2C8P10632 490 aa28.18■■■□□ 2.1
CPSF4-207ENST00000451876 PDHBP11177 359 aa28.18■■■□□ 2.1
CPSF4-207ENST00000451876 JMYQ8N9B5 988 aa28.18■■■□□ 2.1
CPSF4-207ENST00000451876 GMCL1Q96IK5 515 aa28.18■■■□□ 2.1
CPSF4-207ENST00000451876 TANGO6Q9C0B7 1094 aa28.18■■■□□ 2.1
CPSF4-207ENST00000451876 SLC45A1Q9Y2W3 748 aa28.18■■■□□ 2.1
CPSF4-207ENST00000451876 OTUD7BQ6GQQ9 843 aa28.18■■■□□ 2.1
CPSF4-207ENST00000451876 CATSPERGQ6ZRH7 1159 aa28.18■■■□□ 2.1
CPSF4-207ENST00000451876 ASCC2Q9H1I8 757 aaPredicted RBP28.18■■■□□ 2.1
CPSF4-207ENST00000451876 ZCCHC17Q9NP64 241 aaKnown RBP28.18■■■□□ 2.1
CPSF4-207ENST00000451876 RNF186Q9NXI6 227 aa28.18■■■□□ 2.1
CPSF4-207ENST00000451876 COL11A1P12107 1806 aaPredicted RBP28.17■■■□□ 2.1
CPSF4-207ENST00000451876 USP17L15C9J2P7 530 aa28.17■■■□□ 2.1
CPSF4-207ENST00000451876 USP17L13C9JLJ4 530 aa28.17■■■□□ 2.1
CPSF4-207ENST00000451876 USP17L11C9JVI0 530 aa28.17■■■□□ 2.1
CPSF4-207ENST00000451876 USP17L18D6R9N7 530 aa28.17■■■□□ 2.1
CPSF4-207ENST00000451876 USP17L22D6RA61 530 aa28.17■■■□□ 2.1
CPSF4-207ENST00000451876 USP17L17D6RBQ6 530 aa28.17■■■□□ 2.1
CPSF4-207ENST00000451876 USP17L19D6RCP7 530 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms