RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 OTUD7AQ8TE49 926 aaPredicted RBP20.78■□□□□ 0.92
CLTCL1-203ENST00000449918 FSD1Q9BTV5 496 aa20.78■□□□□ 0.92
CLTCL1-203ENST00000449918 RPTORQ8N122 1335 aa20.78■□□□□ 0.92
CLTCL1-203ENST00000449918 SPDYE16A6NNV3 312 aaPredicted RBP20.77■□□□□ 0.92
CLTCL1-203ENST00000449918 MINDY4BA8MYZ0 360 aa20.77■□□□□ 0.92
CLTCL1-203ENST00000449918 APPP05067 770 aa20.77■□□□□ 0.92
CLTCL1-203ENST00000449918 MORN1Q5T089 497 aa20.77■□□□□ 0.92
CLTCL1-203ENST00000449918 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.77■□□□□ 0.92
CLTCL1-203ENST00000449918 MKNK2Q9HBH9 465 aa20.77■□□□□ 0.92
CLTCL1-203ENST00000449918 HMX1Q9NP08 348 aaPredicted RBP20.77■□□□□ 0.92
CLTCL1-203ENST00000449918 DOCK3Q8IZD9 2030 aa20.77■□□□□ 0.91
CLTCL1-203ENST00000449918 MYH7P12883 1935 aa20.76■□□□□ 0.91
CLTCL1-203ENST00000449918 PATL2C9JE40 543 aaKnown RBP20.76■□□□□ 0.91
CLTCL1-203ENST00000449918 FARP2O94887 1054 aaPredicted RBP20.76■□□□□ 0.91
CLTCL1-203ENST00000449918 TDO2P48775 406 aa20.76■□□□□ 0.91
CLTCL1-203ENST00000449918 WDR78Q5VTH9 848 aa20.76■□□□□ 0.91
CLTCL1-203ENST00000449918 UBE2Q1Q7Z7E8 422 aa20.76■□□□□ 0.91
CLTCL1-203ENST00000449918 TRIB2Q92519 343 aa20.76■□□□□ 0.91
CLTCL1-203ENST00000449918 USP6NLQ92738 828 aa20.76■□□□□ 0.91
CLTCL1-203ENST00000449918 DPF3Q92784 378 aa20.76■□□□□ 0.91
CLTCL1-203ENST00000449918 HTATIP2Q9BUP3 242 aa20.76■□□□□ 0.91
CLTCL1-203ENST00000449918 NACAP1Q9BZK3 213 aa20.76■□□□□ 0.91
CLTCL1-203ENST00000449918 CRISPLD2Q9H0B8 497 aa20.76■□□□□ 0.91
CLTCL1-203ENST00000449918 VCPKMTQ9H867 229 aa20.76■□□□□ 0.91
CLTCL1-203ENST00000449918 ZNF287Q9HBT7 754 aa20.76■□□□□ 0.91
CLTCL1-203ENST00000449918 BTBD7Q9P203 1132 aa20.76■□□□□ 0.91
CLTCL1-203ENST00000449918 M0R2C6 588 aa20.75■□□□□ 0.91
CLTCL1-203ENST00000449918 EEF2P13639 858 aaKnown RBP20.75■□□□□ 0.91
CLTCL1-203ENST00000449918 ZKSCAN1P17029 563 aaPredicted RBP20.75■□□□□ 0.91
CLTCL1-203ENST00000449918 ATP2B2Q01814 1243 aa20.75■□□□□ 0.91
CLTCL1-203ENST00000449918 CLEC10AQ8IUN9 316 aa20.75■□□□□ 0.91
CLTCL1-203ENST00000449918 SPICE1Q8N0Z3 855 aa20.75■□□□□ 0.91
CLTCL1-203ENST00000449918 MB21D1Q8N884 522 aa20.75■□□□□ 0.91
CLTCL1-203ENST00000449918 IVNS1ABPQ9Y6Y0 642 aa20.75■□□□□ 0.91
CLTCL1-203ENST00000449918 BAZ2AQ9UIF9 1905 aaKnown RBP20.74■□□□□ 0.91
CLTCL1-203ENST00000449918 SLC15A5A6NIM6 579 aa20.74■□□□□ 0.91
CLTCL1-203ENST00000449918 WDR46O15213 610 aaKnown RBP20.74■□□□□ 0.91
CLTCL1-203ENST00000449918 FLOT1O75955 427 aa20.74■□□□□ 0.91
CLTCL1-203ENST00000449918 MAP2K5Q13163 448 aa20.74■□□□□ 0.91
CLTCL1-203ENST00000449918 KIAA1755Q5JYT7 1200 aa20.74■□□□□ 0.91
CLTCL1-203ENST00000449918 APBA2Q99767 749 aa20.74■□□□□ 0.91
CLTCL1-203ENST00000449918 GOPCQ9HD26 462 aa20.74■□□□□ 0.91
CLTCL1-203ENST00000449918 PTPREP23469 700 aa20.73■□□□□ 0.91
CLTCL1-203ENST00000449918 TRIM32Q13049 653 aa20.73■□□□□ 0.91
CLTCL1-203ENST00000449918 IFNL3Q8IZI9 196 aa20.73■□□□□ 0.91
CLTCL1-203ENST00000449918 ZNF444Q8N0Y2 327 aaPredicted RBP20.73■□□□□ 0.91
CLTCL1-203ENST00000449918 STK11IPQ8N1F8 1099 aa20.73■□□□□ 0.91
CLTCL1-203ENST00000449918 STAP2Q9UGK3 403 aa20.73■□□□□ 0.91
CLTCL1-203ENST00000449918 PRKAR2AP13861 404 aaKnown RBP20.72■□□□□ 0.91
CLTCL1-203ENST00000449918 RASA1P20936 1047 aa20.72■□□□□ 0.91
CLTCL1-203ENST00000449918 DSG3P32926 999 aa20.72■□□□□ 0.91
CLTCL1-203ENST00000449918 ZMYM1Q5SVZ6 1142 aa20.72■□□□□ 0.91
CLTCL1-203ENST00000449918 MAP3K21Q5TCX8 1036 aa20.72■□□□□ 0.91
CLTCL1-203ENST00000449918 EVI5LQ96CN4 794 aa20.72■□□□□ 0.91
CLTCL1-203ENST00000449918 RWDD1Q9H446 243 aaPredicted RBP20.72■□□□□ 0.91
CLTCL1-203ENST00000449918 EPB41L4AQ9HCS5 686 aaPredicted RBP20.72■□□□□ 0.91
CLTCL1-203ENST00000449918 SALL3Q9BXA9 1300 aa20.72■□□□□ 0.91
CLTCL1-203ENST00000449918 ROBO3Q96MS0 1386 aa20.72■□□□□ 0.91
CLTCL1-203ENST00000449918 STRNO43815 780 aa20.71■□□□□ 0.91
CLTCL1-203ENST00000449918 SLC34A2O95436 690 aa20.71■□□□□ 0.91
CLTCL1-203ENST00000449918 SLC3A2P08195 630 aaKnown RBP20.71■□□□□ 0.91
CLTCL1-203ENST00000449918 ANKLE1Q8NAG6 615 aa20.71■□□□□ 0.91
CLTCL1-203ENST00000449918 SHCBP1Q8NEM2 672 aa20.71■□□□□ 0.91
CLTCL1-203ENST00000449918 SEC62Q99442 399 aaKnown RBP20.71■□□□□ 0.91
CLTCL1-203ENST00000449918 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.71■□□□□ 0.91
CLTCL1-203ENST00000449918 MOV10L1Q9BXT6 1211 aaKnown RBP20.71■□□□□ 0.91
CLTCL1-203ENST00000449918 SPATC1LQ9H0A9 340 aa20.71■□□□□ 0.91
CLTCL1-203ENST00000449918 H0YGN5 161 aa20.7■□□□□ 0.9
CLTCL1-203ENST00000449918 RAD21O60216 631 aa20.7■□□□□ 0.9
CLTCL1-203ENST00000449918 PDE1AP54750 535 aa20.7■□□□□ 0.9
CLTCL1-203ENST00000449918 CACNB2Q08289 660 aaPredicted RBP20.7■□□□□ 0.9
CLTCL1-203ENST00000449918 GRB14Q14449 540 aa20.7■□□□□ 0.9
CLTCL1-203ENST00000449918 CCL14Q16627 93 aa20.7■□□□□ 0.9
CLTCL1-203ENST00000449918 MFSD14CQ5VZR4 134 aa20.7■□□□□ 0.9
CLTCL1-203ENST00000449918 NAPBQ9H115 298 aa20.7■□□□□ 0.9
CLTCL1-203ENST00000449918 NYAP2Q9P242 653 aa20.7■□□□□ 0.9
CLTCL1-203ENST00000449918 HOXC6P09630 235 aa20.69■□□□□ 0.9
CLTCL1-203ENST00000449918 PDE4BQ07343 736 aa20.69■□□□□ 0.9
CLTCL1-203ENST00000449918 PLS1Q14651 629 aa20.69■□□□□ 0.9
CLTCL1-203ENST00000449918 SAMD1Q6SPF0 538 aaPredicted RBP20.69■□□□□ 0.9
CLTCL1-203ENST00000449918 NECAB2Q7Z6G3 386 aa20.69■□□□□ 0.9
CLTCL1-203ENST00000449918 ATG4CQ96DT6 458 aa20.69■□□□□ 0.9
CLTCL1-203ENST00000449918 MROH8Q9H579 483 aa20.69■□□□□ 0.9
CLTCL1-203ENST00000449918 NR2E3Q9Y5X4 410 aa20.69■□□□□ 0.9
CLTCL1-203ENST00000449918 PLXNB2O15031 1838 aa20.69■□□□□ 0.9
CLTCL1-203ENST00000449918 ERCC3P19447 782 aa20.68■□□□□ 0.9
CLTCL1-203ENST00000449918 DPP9Q86TI2 863 aa20.68■□□□□ 0.9
CLTCL1-203ENST00000449918 TICAM2Q86XR7 235 aa20.68■□□□□ 0.9
CLTCL1-203ENST00000449918 PAWRQ96IZ0 340 aaKnown RBP20.68■□□□□ 0.9
CLTCL1-203ENST00000449918 MYH8P13535 1937 aa20.68■□□□□ 0.9
CLTCL1-203ENST00000449918 NCAPG2Q86XI2 1143 aa20.67■□□□□ 0.9
CLTCL1-203ENST00000449918 LNPKQ9C0E8 428 aa20.67■□□□□ 0.9
CLTCL1-203ENST00000449918 SLC5A4Q9NY91 659 aa20.67■□□□□ 0.9
CLTCL1-203ENST00000449918 CLIP2Q9UDT6 1046 aa20.67■□□□□ 0.9
CLTCL1-203ENST00000449918 OGDHLQ9ULD0 1010 aa20.67■□□□□ 0.9
CLTCL1-203ENST00000449918 ADAMTS5Q9UNA0 930 aa20.67■□□□□ 0.9
CLTCL1-203ENST00000449918 PRDM1O75626 825 aa20.66■□□□□ 0.9
CLTCL1-203ENST00000449918 SLC25A27O95847 323 aa20.66■□□□□ 0.9
CLTCL1-203ENST00000449918 ADORA2AP29274 412 aa20.66■□□□□ 0.9
CLTCL1-203ENST00000449918 PPARAQ07869 468 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms