RNA–Protein interactions for RNA: ENST00000449457.1

LINC02561-201, Transcript of long intergenic non-protein coding RNA 2561, humanhuman

TSL 3 BASIC

Gene LINC02561, Length 692 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02561-201ENST00000449457 PTPRCP08575 1304 aa12.26□□□□□ -0.45
LINC02561-201ENST00000449457 FOCADQ5VW36 1801 aa12.25□□□□□ -0.45
LINC02561-201ENST00000449457 TRIM66O15016 1216 aa12.25□□□□□ -0.45
LINC02561-201ENST00000449457 IL15P40933 162 aaPredicted RBP12.25□□□□□ -0.45
LINC02561-201ENST00000449457 RGS2P41220 211 aa12.25□□□□□ -0.45
LINC02561-201ENST00000449457 DYNLL1P63167 89 aaKnown RBP12.25□□□□□ -0.45
LINC02561-201ENST00000449457 TRIM60Q495X7 471 aa12.25□□□□□ -0.45
LINC02561-201ENST00000449457 CCAR1Q8IX12 1150 aaKnown RBP12.25□□□□□ -0.45
LINC02561-201ENST00000449457 ZNF454Q8N9F8 522 aa12.25□□□□□ -0.45
LINC02561-201ENST00000449457 BADQ92934 168 aa12.25□□□□□ -0.45
LINC02561-201ENST00000449457 FERMT2Q96AC1 680 aa12.25□□□□□ -0.45
LINC02561-201ENST00000449457 CDCA7LQ96GN5 454 aa12.25□□□□□ -0.45
LINC02561-201ENST00000449457 SEMA6BQ9H3T3 888 aa12.25□□□□□ -0.45
LINC02561-201ENST00000449457 NPDC1Q9NQX5 325 aaPredicted RBP12.25□□□□□ -0.45
LINC02561-201ENST00000449457 SMC4Q9NTJ3 1288 aa12.25□□□□□ -0.45
LINC02561-201ENST00000449457 ZBTB21Q9ULJ3 1066 aa12.25□□□□□ -0.45
LINC02561-201ENST00000449457 FLT1P17948 1338 aa12.25□□□□□ -0.45
LINC02561-201ENST00000449457 ZNF521Q96K83 1311 aa12.25□□□□□ -0.45
LINC02561-201ENST00000449457 REV3LO60673 3130 aa12.24□□□□□ -0.45
LINC02561-201ENST00000449457 FOSL2P15408 326 aa12.24□□□□□ -0.45
LINC02561-201ENST00000449457 ITGB8P26012 769 aa12.24□□□□□ -0.45
LINC02561-201ENST00000449457 EPHB4P54760 987 aa12.24□□□□□ -0.45
LINC02561-201ENST00000449457 MAP2K5Q13163 448 aa12.24□□□□□ -0.45
LINC02561-201ENST00000449457 PRAMEF19Q5SWL8 479 aa12.24□□□□□ -0.45
LINC02561-201ENST00000449457 SPATA5Q8NB90 893 aa12.24□□□□□ -0.45
LINC02561-201ENST00000449457 AS3MTQ9HBK9 375 aa12.24□□□□□ -0.45
LINC02561-201ENST00000449457 BTBD7Q9P203 1132 aa12.24□□□□□ -0.45
LINC02561-201ENST00000449457 DDX20Q9UHI6 824 aaKnown RBP12.24□□□□□ -0.45
LINC02561-201ENST00000449457 TTC28Q96AY4 2481 aa12.23□□□□□ -0.45
LINC02561-201ENST00000449457 GH2P01242 217 aa12.23□□□□□ -0.45
LINC02561-201ENST00000449457 XRCC5P13010 732 aaKnown RBP12.23□□□□□ -0.45
LINC02561-201ENST00000449457 MAPK4P31152 587 aa12.23□□□□□ -0.45
LINC02561-201ENST00000449457 SPTY2D1Q68D10 685 aaPredicted RBP12.23□□□□□ -0.45
LINC02561-201ENST00000449457 SLF2Q8IX21 1173 aa12.23□□□□□ -0.45
LINC02561-201ENST00000449457 CRACR2BQ8N4Y2 399 aaPredicted RBP12.23□□□□□ -0.45
LINC02561-201ENST00000449457 ACER1Q8TDN7 264 aa12.23□□□□□ -0.45
LINC02561-201ENST00000449457 LENG1Q96BZ8 264 aaPredicted RBP12.23□□□□□ -0.45
LINC02561-201ENST00000449457 WDR18Q9BV38 432 aa12.23□□□□□ -0.45
LINC02561-201ENST00000449457 TRIM43BA6NCK2 446 aa12.22□□□□□ -0.45
LINC02561-201ENST00000449457 USP17L10C9JJH3 530 aa12.22□□□□□ -0.45
LINC02561-201ENST00000449457 COL9A1P20849 921 aa12.22□□□□□ -0.45
LINC02561-201ENST00000449457 HOXA7P31268 230 aaPredicted RBP12.22□□□□□ -0.45
LINC02561-201ENST00000449457 FAM109BQ6ICB4 259 aaPredicted RBP12.22□□□□□ -0.45
LINC02561-201ENST00000449457 PPM1EQ8WY54 764 aa12.22□□□□□ -0.45
LINC02561-201ENST00000449457 TRIM43Q96BQ3 446 aaPredicted RBP12.22□□□□□ -0.45
LINC02561-201ENST00000449457 FEZ1Q99689 392 aa12.22□□□□□ -0.45
LINC02561-201ENST00000449457 COPRSQ9NQ92 184 aa12.22□□□□□ -0.45
LINC02561-201ENST00000449457 PDLIM7Q9NR12 457 aa12.22□□□□□ -0.45
LINC02561-201ENST00000449457 NOB1Q9ULX3 412 aaKnown RBP12.22□□□□□ -0.45
LINC02561-201ENST00000449457 XIRP2A4UGR9 3374 aa12.22□□□□□ -0.45
LINC02561-201ENST00000449457 MYH1P12882 1939 aa12.21□□□□□ -0.45
LINC02561-201ENST00000449457 PDS5AQ29RF7 1337 aaKnown RBP12.21□□□□□ -0.45
LINC02561-201ENST00000449457 SRGAP3O43295 1099 aa12.21□□□□□ -0.45
LINC02561-201ENST00000449457 ASNSP08243 561 aa12.21□□□□□ -0.45
LINC02561-201ENST00000449457 MVPQ14764 893 aaKnown RBP12.21□□□□□ -0.45
LINC02561-201ENST00000449457 MFSD14CQ5VZR4 134 aa12.21□□□□□ -0.45
LINC02561-201ENST00000449457 ZDHHC16Q969W1 377 aa12.21□□□□□ -0.45
LINC02561-201ENST00000449457 EDC3Q96F86 508 aaKnown RBP12.21□□□□□ -0.45
LINC02561-201ENST00000449457 LRP2BPQ9P2M1 347 aa12.21□□□□□ -0.45
LINC02561-201ENST00000449457 LHX6Q9UPM6 363 aa12.21□□□□□ -0.45
LINC02561-201ENST00000449457 CYBAP13498 195 aa12.2□□□□□ -0.46
LINC02561-201ENST00000449457 CAPN2P17655 700 aa12.2□□□□□ -0.46
LINC02561-201ENST00000449457 VCAM1P19320 739 aa12.2□□□□□ -0.46
LINC02561-201ENST00000449457 PTPREP23469 700 aa12.2□□□□□ -0.46
LINC02561-201ENST00000449457 ARID4AP29374 1257 aaPredicted RBP12.2□□□□□ -0.46
LINC02561-201ENST00000449457 PDE4DQ08499 809 aa12.2□□□□□ -0.46
LINC02561-201ENST00000449457 GRIN2CQ14957 1233 aa12.2□□□□□ -0.46
LINC02561-201ENST00000449457 RAB3GAP1Q15042 981 aa12.2□□□□□ -0.46
LINC02561-201ENST00000449457 TMEM132AQ24JP5 1023 aa12.2□□□□□ -0.46
LINC02561-201ENST00000449457 FAM47AQ5JRC9 791 aa12.2□□□□□ -0.46
LINC02561-201ENST00000449457 GORABQ5T7V8 394 aa12.2□□□□□ -0.46
LINC02561-201ENST00000449457 NAA16Q6N069 864 aaPredicted RBP12.2□□□□□ -0.46
LINC02561-201ENST00000449457 CLEC10AQ8IUN9 316 aa12.2□□□□□ -0.46
LINC02561-201ENST00000449457 MIGA1Q8NAN2 632 aa12.2□□□□□ -0.46
LINC02561-201ENST00000449457 TRIM34Q9BYJ4 488 aa12.2□□□□□ -0.46
LINC02561-201ENST00000449457 PIH1D3Q9NQM4 214 aaKnown RBP12.2□□□□□ -0.46
LINC02561-201ENST00000449457 PI4KBQ9UBF8 816 aa12.2□□□□□ -0.46
LINC02561-201ENST00000449457 PRKAG2Q9UGJ0 569 aa12.2□□□□□ -0.46
LINC02561-201ENST00000449457 HERC5Q9UII4 1024 aaKnown RBP12.2□□□□□ -0.46
LINC02561-201ENST00000449457 PNMA6EA0A0J9YXQ4 647 aa12.19□□□□□ -0.46
LINC02561-201ENST00000449457 DNM1LO00429 736 aa12.19□□□□□ -0.46
LINC02561-201ENST00000449457 SNPHO15079 494 aa12.19□□□□□ -0.46
LINC02561-201ENST00000449457 ADCYAP1R1P41586 468 aa12.19□□□□□ -0.46
LINC02561-201ENST00000449457 GSTO1P78417 241 aa12.19□□□□□ -0.46
LINC02561-201ENST00000449457 ATP2B2Q01814 1243 aa12.19□□□□□ -0.46
LINC02561-201ENST00000449457 GRB14Q14449 540 aa12.19□□□□□ -0.46
LINC02561-201ENST00000449457 C6orf132Q5T0Z8 1188 aa12.19□□□□□ -0.46
LINC02561-201ENST00000449457 USP17L2Q6R6M4 530 aa12.19□□□□□ -0.46
LINC02561-201ENST00000449457 SLC39A5Q6ZMH5 540 aa12.19□□□□□ -0.46
LINC02561-201ENST00000449457 LPAR1Q92633 364 aa12.19□□□□□ -0.46
LINC02561-201ENST00000449457 DBNDD2Q9BQY9 259 aa12.19□□□□□ -0.46
LINC02561-201ENST00000449457 TBC1D2Q9BYX2 928 aa12.19□□□□□ -0.46
LINC02561-201ENST00000449457 ADAM33Q9BZ11 813 aa12.19□□□□□ -0.46
LINC02561-201ENST00000449457 RPAP3Q9H6T3 665 aaPredicted RBP12.19□□□□□ -0.46
LINC02561-201ENST00000449457 TLR7Q9NYK1 1049 aaKnown RBP12.19□□□□□ -0.46
LINC02561-201ENST00000449457 A0A0G2JMZ2 1700 aa12.18□□□□□ -0.46
LINC02561-201ENST00000449457 COBLO75128 1261 aa12.18□□□□□ -0.46
LINC02561-201ENST00000449457 LDHCP07864 332 aa12.18□□□□□ -0.46
LINC02561-201ENST00000449457 KIAA1755Q5JYT7 1200 aa12.18□□□□□ -0.46
LINC02561-201ENST00000449457 RNPC3Q96LT9 517 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms