RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 TRMT44Q8IYL2 757 aaKnown RBP23.58■■□□□ 1.37
VCP-203ENST00000448530 PI4K2BQ8TCG2 481 aa23.58■■□□□ 1.37
VCP-203ENST00000448530 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.58■■□□□ 1.37
VCP-203ENST00000448530 TMX2Q9Y320 296 aa23.58■■□□□ 1.37
VCP-203ENST00000448530 SPDYE16A6NNV3 312 aaPredicted RBP23.57■■□□□ 1.36
VCP-203ENST00000448530 SMIM22K7EJ46 135 aa23.57■■□□□ 1.36
VCP-203ENST00000448530 FARP2O94887 1054 aaPredicted RBP23.57■■□□□ 1.36
VCP-203ENST00000448530 RGS2P41220 211 aa23.57■■□□□ 1.36
VCP-203ENST00000448530 HDAC1Q13547 482 aaPredicted RBP23.57■■□□□ 1.36
VCP-203ENST00000448530 AAMPQ13685 434 aa23.57■■□□□ 1.36
VCP-203ENST00000448530 CLEC10AQ8IUN9 316 aa23.57■■□□□ 1.36
VCP-203ENST00000448530 KANSL2Q9H9L4 492 aa23.57■■□□□ 1.36
VCP-203ENST00000448530 MKNK2Q9HBH9 465 aa23.57■■□□□ 1.36
VCP-203ENST00000448530 HMX1Q9NP08 348 aaPredicted RBP23.57■■□□□ 1.36
VCP-203ENST00000448530 PAK6Q9NQU5 681 aaPredicted RBP23.57■■□□□ 1.36
VCP-203ENST00000448530 CNMDO75829 334 aa23.56■■□□□ 1.36
VCP-203ENST00000448530 ZKSCAN1P17029 563 aaPredicted RBP23.56■■□□□ 1.36
VCP-203ENST00000448530 POTEEQ6S8J3 1075 aa23.56■■□□□ 1.36
VCP-203ENST00000448530 TRIB2Q92519 343 aa23.56■■□□□ 1.36
VCP-203ENST00000448530 HTATIP2Q9BUP3 242 aa23.56■■□□□ 1.36
VCP-203ENST00000448530 NACAP1Q9BZK3 213 aa23.56■■□□□ 1.36
VCP-203ENST00000448530 VCPKMTQ9H867 229 aa23.56■■□□□ 1.36
VCP-203ENST00000448530 IVNS1ABPQ9Y6Y0 642 aa23.56■■□□□ 1.36
VCP-203ENST00000448530 RPTORQ8N122 1335 aa23.56■■□□□ 1.36
VCP-203ENST00000448530 M0R2C6 588 aa23.55■■□□□ 1.36
VCP-203ENST00000448530 SPICE1Q8N0Z3 855 aa23.55■■□□□ 1.36
VCP-203ENST00000448530 STK11IPQ8N1F8 1099 aa23.55■■□□□ 1.36
VCP-203ENST00000448530 DPF3Q92784 378 aa23.55■■□□□ 1.36
VCP-203ENST00000448530 ZNF287Q9HBT7 754 aa23.55■■□□□ 1.36
VCP-203ENST00000448530 BTBD7Q9P203 1132 aa23.55■■□□□ 1.36
VCP-203ENST00000448530 EEF2P13639 858 aaKnown RBP23.54■■□□□ 1.36
VCP-203ENST00000448530 MORN1Q5T089 497 aa23.54■■□□□ 1.36
VCP-203ENST00000448530 SIAH1Q8IUQ4 282 aa23.54■■□□□ 1.36
VCP-203ENST00000448530 APBA2Q99767 749 aa23.54■■□□□ 1.36
VCP-203ENST00000448530 GOPCQ9HD26 462 aa23.54■■□□□ 1.36
VCP-203ENST00000448530 PATL2C9JE40 543 aaKnown RBP23.53■■□□□ 1.36
VCP-203ENST00000448530 WDR46O15213 610 aaKnown RBP23.53■■□□□ 1.36
VCP-203ENST00000448530 RAD21O60216 631 aa23.53■■□□□ 1.36
VCP-203ENST00000448530 FLOT1O75955 427 aa23.53■■□□□ 1.36
VCP-203ENST00000448530 TRIM32Q13049 653 aa23.53■■□□□ 1.36
VCP-203ENST00000448530 MAP2K5Q13163 448 aa23.53■■□□□ 1.36
VCP-203ENST00000448530 SAMD1Q6SPF0 538 aaPredicted RBP23.53■■□□□ 1.36
VCP-203ENST00000448530 MB21D1Q8N884 522 aa23.53■■□□□ 1.36
VCP-203ENST00000448530 USP6NLQ92738 828 aa23.53■■□□□ 1.36
VCP-203ENST00000448530 SLC15A5A6NIM6 579 aa23.52■■□□□ 1.36
VCP-203ENST00000448530 PRKAR2AP13861 404 aaKnown RBP23.52■■□□□ 1.36
VCP-203ENST00000448530 KIAA1755Q5JYT7 1200 aa23.52■■□□□ 1.36
VCP-203ENST00000448530 UBE2Q1Q7Z7E8 422 aa23.52■■□□□ 1.36
VCP-203ENST00000448530 CRISPLD2Q9H0B8 497 aa23.52■■□□□ 1.36
VCP-203ENST00000448530 ROBO3Q96MS0 1386 aa23.52■■□□□ 1.36
VCP-203ENST00000448530 RASA1P20936 1047 aa23.51■■□□□ 1.35
VCP-203ENST00000448530 PTPREP23469 700 aa23.51■■□□□ 1.35
VCP-203ENST00000448530 DSG3P32926 999 aa23.51■■□□□ 1.35
VCP-203ENST00000448530 ZMYM1Q5SVZ6 1142 aa23.51■■□□□ 1.35
VCP-203ENST00000448530 IFNL3Q8IZI9 196 aa23.51■■□□□ 1.35
VCP-203ENST00000448530 ZNF444Q8N0Y2 327 aaPredicted RBP23.51■■□□□ 1.35
VCP-203ENST00000448530 SEC62Q99442 399 aaKnown RBP23.51■■□□□ 1.35
VCP-203ENST00000448530 RWDD1Q9H446 243 aaPredicted RBP23.51■■□□□ 1.35
VCP-203ENST00000448530 EPB41L4AQ9HCS5 686 aaPredicted RBP23.51■■□□□ 1.35
VCP-203ENST00000448530 SLC3A2P08195 630 aaKnown RBP23.5■■□□□ 1.35
VCP-203ENST00000448530 PLS1Q14651 629 aa23.5■■□□□ 1.35
VCP-203ENST00000448530 EVI5LQ96CN4 794 aa23.5■■□□□ 1.35
VCP-203ENST00000448530 SPATC1LQ9H0A9 340 aa23.5■■□□□ 1.35
VCP-203ENST00000448530 NAPBQ9H115 298 aa23.5■■□□□ 1.35
VCP-203ENST00000448530 STAP2Q9UGK3 403 aa23.5■■□□□ 1.35
VCP-203ENST00000448530 SALL3Q9BXA9 1300 aa23.5■■□□□ 1.35
VCP-203ENST00000448530 RLFQ13129 1914 aa23.49■■□□□ 1.35
VCP-203ENST00000448530 CEP290O15078 2479 aa23.49■■□□□ 1.35
VCP-203ENST00000448530 CCL14Q16627 93 aa23.49■■□□□ 1.35
VCP-203ENST00000448530 MAP3K21Q5TCX8 1036 aa23.49■■□□□ 1.35
VCP-203ENST00000448530 MOV10L1Q9BXT6 1211 aaKnown RBP23.49■■□□□ 1.35
VCP-203ENST00000448530 A0A0G2JMZ2 1700 aa23.48■■□□□ 1.35
VCP-203ENST00000448530 PDE1AP54750 535 aa23.48■■□□□ 1.35
VCP-203ENST00000448530 CACNB2Q08289 660 aaPredicted RBP23.48■■□□□ 1.35
VCP-203ENST00000448530 GRB14Q14449 540 aa23.48■■□□□ 1.35
VCP-203ENST00000448530 MFSD14CQ5VZR4 134 aa23.48■■□□□ 1.35
VCP-203ENST00000448530 ANKLE1Q8NAG6 615 aa23.48■■□□□ 1.35
VCP-203ENST00000448530 SHCBP1Q8NEM2 672 aa23.48■■□□□ 1.35
VCP-203ENST00000448530 ATG4CQ96DT6 458 aa23.48■■□□□ 1.35
VCP-203ENST00000448530 NR2E3Q9Y5X4 410 aa23.48■■□□□ 1.35
VCP-203ENST00000448530 GREB1LQ9C091 1923 aaPredicted RBP23.47■■□□□ 1.35
VCP-203ENST00000448530 H0YGN5 161 aa23.47■■□□□ 1.35
VCP-203ENST00000448530 STRNO43815 780 aa23.47■■□□□ 1.35
VCP-203ENST00000448530 SLC34A2O95436 690 aa23.47■■□□□ 1.35
VCP-203ENST00000448530 PDE4BQ07343 736 aa23.47■■□□□ 1.35
VCP-203ENST00000448530 NECAB2Q7Z6G3 386 aa23.47■■□□□ 1.35
VCP-203ENST00000448530 DPP9Q86TI2 863 aa23.47■■□□□ 1.35
VCP-203ENST00000448530 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.47■■□□□ 1.35
VCP-203ENST00000448530 MROH8Q9H579 483 aa23.47■■□□□ 1.35
VCP-203ENST00000448530 NYAP2Q9P242 653 aa23.47■■□□□ 1.35
VCP-203ENST00000448530 PRDM1O75626 825 aa23.46■■□□□ 1.35
VCP-203ENST00000448530 ERCC3P19447 782 aa23.46■■□□□ 1.35
VCP-203ENST00000448530 PARP14Q460N5 1801 aa23.46■■□□□ 1.35
VCP-203ENST00000448530 NCAPG2Q86XI2 1143 aa23.46■■□□□ 1.35
VCP-203ENST00000448530 PAWRQ96IZ0 340 aaKnown RBP23.46■■□□□ 1.35
VCP-203ENST00000448530 LNPKQ9C0E8 428 aa23.46■■□□□ 1.35
VCP-203ENST00000448530 HOXC6P09630 235 aa23.45■■□□□ 1.34
VCP-203ENST00000448530 FAM83BQ5T0W9 1011 aa23.45■■□□□ 1.34
VCP-203ENST00000448530 B4GALNT3Q6L9W6 998 aa23.45■■□□□ 1.34
VCP-203ENST00000448530 SLC5A4Q9NY91 659 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms