RNA–Protein interactions for RNA: ENST00000447608.1

COL11A1-205, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-205ENST00000447608 ADAT2Q7Z6V5 191 aaKnown RBP8.56□□□□□ -1.04
COL11A1-205ENST00000447608 CCDC144CPQ8IYA2 1237 aa8.56□□□□□ -1.04
COL11A1-205ENST00000447608 RNF214Q8ND24 703 aa8.56□□□□□ -1.04
COL11A1-205ENST00000447608 SMARCC1Q92922 1105 aaPredicted RBP8.56□□□□□ -1.04
COL11A1-205ENST00000447608 OSBP2Q969R2 916 aa8.56□□□□□ -1.04
COL11A1-205ENST00000447608 ZNF451Q9Y4E5 1061 aa8.56□□□□□ -1.04
COL11A1-205ENST00000447608 SPDYE3A6NKU9 549 aa8.55□□□□□ -1.04
COL11A1-205ENST00000447608 ALDH1L1O75891 902 aa8.55□□□□□ -1.04
COL11A1-205ENST00000447608 GUCY2FP51841 1108 aa8.55□□□□□ -1.04
COL11A1-205ENST00000447608 SLBPQ14493 270 aaKnown RBP eCLIP8.55□□□□□ -1.04
COL11A1-205ENST00000447608 WWC2Q6AWC2 1192 aa8.55□□□□□ -1.04
COL11A1-205ENST00000447608 DDX46Q7L014 1031 aaKnown RBP8.55□□□□□ -1.04
COL11A1-205ENST00000447608 CDC37L1Q7L3B6 337 aa8.55□□□□□ -1.04
COL11A1-205ENST00000447608 MAP4K3Q8IVH8 894 aa8.55□□□□□ -1.04
COL11A1-205ENST00000447608 DDX1Q92499 740 aaKnown RBP8.55□□□□□ -1.04
COL11A1-205ENST00000447608 TSR2Q969E8 191 aaKnown RBP8.55□□□□□ -1.04
COL11A1-205ENST00000447608 FANCD2OSQ96PS1 177 aa8.55□□□□□ -1.04
COL11A1-205ENST00000447608 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.55□□□□□ -1.04
COL11A1-205ENST00000447608 INTS7Q9NVH2 962 aaKnown RBP8.55□□□□□ -1.04
COL11A1-205ENST00000447608 PEX14O75381 377 aa8.54□□□□□ -1.04
COL11A1-205ENST00000447608 DEAF1O75398 565 aaPredicted RBP8.54□□□□□ -1.04
COL11A1-205ENST00000447608 DNAJC8O75937 253 aaPredicted RBP8.54□□□□□ -1.04
COL11A1-205ENST00000447608 EYA4O95677 639 aa8.54□□□□□ -1.04
COL11A1-205ENST00000447608 CAPNS1P04632 268 aa8.54□□□□□ -1.04
COL11A1-205ENST00000447608 TBX4P57082 545 aa8.54□□□□□ -1.04
COL11A1-205ENST00000447608 TTLL4Q14679 1199 aa8.54□□□□□ -1.04
COL11A1-205ENST00000447608 PRAMEF13Q5VWM6 474 aa8.54□□□□□ -1.04
COL11A1-205ENST00000447608 BVESQ8NE79 360 aa8.54□□□□□ -1.04
COL11A1-205ENST00000447608 SLC7A14Q8TBB6 771 aa8.54□□□□□ -1.04
COL11A1-205ENST00000447608 CYB5D2Q8WUJ1 264 aa8.54□□□□□ -1.04
COL11A1-205ENST00000447608 LEO1Q8WVC0 666 aaPredicted RBP8.54□□□□□ -1.04
COL11A1-205ENST00000447608 SFMBT1Q9UHJ3 866 aa8.54□□□□□ -1.04
COL11A1-205ENST00000447608 FAM83GA6ND36 823 aa8.53□□□□□ -1.04
COL11A1-205ENST00000447608 NEFMP07197 916 aa8.53□□□□□ -1.04
COL11A1-205ENST00000447608 MAP7Q14244 749 aa8.53□□□□□ -1.04
COL11A1-205ENST00000447608 TTF1Q15361 905 aaPredicted RBP8.53□□□□□ -1.04
COL11A1-205ENST00000447608 RNFT1Q5M7Z0 435 aa8.53□□□□□ -1.04
COL11A1-205ENST00000447608 CHSY3Q70JA7 882 aa8.53□□□□□ -1.04
COL11A1-205ENST00000447608 ILDR2Q71H61 639 aa8.53□□□□□ -1.04
COL11A1-205ENST00000447608 CCDC146Q8IYE0 955 aa8.53□□□□□ -1.04
COL11A1-205ENST00000447608 CCDC136Q96JN2 1154 aa8.53□□□□□ -1.04
COL11A1-205ENST00000447608 GBP3Q9H0R5 595 aa8.53□□□□□ -1.04
COL11A1-205ENST00000447608 TRIM39Q9HCM9 518 aa8.53□□□□□ -1.04
COL11A1-205ENST00000447608 NDOR1Q9UHB4 597 aa8.53□□□□□ -1.04
COL11A1-205ENST00000447608 RIPOR2Q9Y4F9 1068 aa8.53□□□□□ -1.04
COL11A1-205ENST00000447608 TPD52L2O43399 206 aaKnown RBP8.52□□□□□ -1.05
COL11A1-205ENST00000447608 KATNA1O75449 491 aa8.52□□□□□ -1.05
COL11A1-205ENST00000447608 PPM1BO75688 479 aa8.52□□□□□ -1.05
COL11A1-205ENST00000447608 CST3P01034 146 aaPredicted RBP8.52□□□□□ -1.05
COL11A1-205ENST00000447608 C6orf222P0C671 652 aaPredicted RBP8.52□□□□□ -1.05
COL11A1-205ENST00000447608 STRN3Q13033 797 aa8.52□□□□□ -1.05
COL11A1-205ENST00000447608 WDR75Q8IWA0 830 aaKnown RBP8.52□□□□□ -1.05
COL11A1-205ENST00000447608 RIN3Q8TB24 985 aa8.52□□□□□ -1.05
COL11A1-205ENST00000447608 XAGE3Q8WTP9 111 aa8.52□□□□□ -1.05
COL11A1-205ENST00000447608 EDARADDQ8WWZ3 215 aa8.52□□□□□ -1.05
COL11A1-205ENST00000447608 ACDQ96AP0 544 aa8.52□□□□□ -1.05
COL11A1-205ENST00000447608 MRGPRX3Q96LB0 322 aa8.52□□□□□ -1.05
COL11A1-205ENST00000447608 C8orf48Q96LL4 319 aa8.52□□□□□ -1.05
COL11A1-205ENST00000447608 PSMD1Q99460 953 aa8.52□□□□□ -1.05
COL11A1-205ENST00000447608 TMPRSS13Q9BYE2 586 aa8.52□□□□□ -1.05
COL11A1-205ENST00000447608 MKRN2Q9H000 416 aaKnown RBP8.52□□□□□ -1.05
COL11A1-205ENST00000447608 ATXN3LQ9H3M9 355 aa8.52□□□□□ -1.05
COL11A1-205ENST00000447608 SLC52A2Q9HAB3 445 aa8.52□□□□□ -1.05
COL11A1-205ENST00000447608 AP4E1Q9UPM8 1137 aa8.52□□□□□ -1.05
COL11A1-205ENST00000447608 NACADO15069 1562 aa8.52□□□□□ -1.05
COL11A1-205ENST00000447608 DLL1O00548 723 aa8.51□□□□□ -1.05
COL11A1-205ENST00000447608 NOP56O00567 594 aaKnown RBP8.51□□□□□ -1.05
COL11A1-205ENST00000447608 PRC1O43663 620 aa8.51□□□□□ -1.05
COL11A1-205ENST00000447608 CD247P20963 164 aa8.51□□□□□ -1.05
COL11A1-205ENST00000447608 EPHB1P54762 984 aa8.51□□□□□ -1.05
COL11A1-205ENST00000447608 PCBP1Q15365 356 aaKnown RBP eCLIP8.51□□□□□ -1.05
COL11A1-205ENST00000447608 NFE2Q16621 373 aaPredicted RBP8.51□□□□□ -1.05
COL11A1-205ENST00000447608 DUOXA2Q1HG44 320 aa8.51□□□□□ -1.05
COL11A1-205ENST00000447608 ANKRD39Q53RE8 183 aa8.51□□□□□ -1.05
COL11A1-205ENST00000447608 TRIM61Q5EBN2 209 aa8.51□□□□□ -1.05
COL11A1-205ENST00000447608 LHFPL2Q6ZUX7 228 aa8.51□□□□□ -1.05
COL11A1-205ENST00000447608 BRAPQ7Z569 592 aa8.51□□□□□ -1.05
COL11A1-205ENST00000447608 FGD2Q7Z6J4 655 aa8.51□□□□□ -1.05
COL11A1-205ENST00000447608 AHI1Q8N157 1196 aa8.51□□□□□ -1.05
COL11A1-205ENST00000447608 PPM1KQ8N3J5 372 aa8.51□□□□□ -1.05
COL11A1-205ENST00000447608 KCT2Q8NC54 265 aa8.51□□□□□ -1.05
COL11A1-205ENST00000447608 GALNT6Q8NCL4 622 aa8.51□□□□□ -1.05
COL11A1-205ENST00000447608 ADCY4Q8NFM4 1077 aa8.51□□□□□ -1.05
COL11A1-205ENST00000447608 ISL2Q96A47 359 aa8.51□□□□□ -1.05
COL11A1-205ENST00000447608 BTBD6Q96KE9 485 aa8.51□□□□□ -1.05
COL11A1-205ENST00000447608 COL25A1Q9BXS0 654 aaPredicted RBP8.51□□□□□ -1.05
COL11A1-205ENST00000447608 PRDM6Q9NQX0 595 aa8.51□□□□□ -1.05
COL11A1-205ENST00000447608 GEMIN8Q9NWZ8 242 aaKnown RBP8.51□□□□□ -1.05
COL11A1-205ENST00000447608 WHRNQ9P202 907 aa8.51□□□□□ -1.05
COL11A1-205ENST00000447608 AKT3Q9Y243 479 aa8.51□□□□□ -1.05
COL11A1-205ENST00000447608 TNPO3Q9Y5L0 923 aaKnown RBP8.51□□□□□ -1.05
COL11A1-205ENST00000447608 BLACEA4D250 179 aa8.5□□□□□ -1.05
COL11A1-205ENST00000447608 PLEKHD1A6NEE1 506 aa8.5□□□□□ -1.05
COL11A1-205ENST00000447608 RNGTTO60942 597 aaKnown RBP8.5□□□□□ -1.05
COL11A1-205ENST00000447608 NID1P14543 1247 aa8.5□□□□□ -1.05
COL11A1-205ENST00000447608 CPEP16870 476 aa8.5□□□□□ -1.05
COL11A1-205ENST00000447608 CAP2P40123 477 aa8.5□□□□□ -1.05
COL11A1-205ENST00000447608 NEK4P51957 841 aa8.5□□□□□ -1.05
COL11A1-205ENST00000447608 COL9A3Q14050 684 aaPredicted RBP8.5□□□□□ -1.05
COL11A1-205ENST00000447608 NBPF12Q5TAG4 269 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms