RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 MKL1Q969V6 931 aa21.09■□□□□ 0.97
TRAPPC4-203ENST00000447216 AGXT2Q9BYV1 514 aa21.09■□□□□ 0.97
TRAPPC4-203ENST00000447216 BRPF3Q9ULD4 1205 aa21.09■□□□□ 0.97
TRAPPC4-203ENST00000447216 TMX2Q9Y320 296 aa21.09■□□□□ 0.97
TRAPPC4-203ENST00000447216 LOC285556D6RIA3 1793 aa21.08■□□□□ 0.97
TRAPPC4-203ENST00000447216 CCDC69A6NI79 296 aa21.08■□□□□ 0.97
TRAPPC4-203ENST00000447216 CD2BP2O95400 341 aaKnown RBP21.08■□□□□ 0.97
TRAPPC4-203ENST00000447216 KIAA1755Q5JYT7 1200 aa21.08■□□□□ 0.97
TRAPPC4-203ENST00000447216 PNMA1Q8ND90 353 aa21.08■□□□□ 0.97
TRAPPC4-203ENST00000447216 MYL10Q9BUA6 226 aa21.08■□□□□ 0.97
TRAPPC4-203ENST00000447216 ALDH8A1Q9H2A2 487 aaPredicted RBP21.08■□□□□ 0.97
TRAPPC4-203ENST00000447216 CREBZFQ9NS37 354 aa21.08■□□□□ 0.97
TRAPPC4-203ENST00000447216 NAP1L2Q9ULW6 460 aaPredicted RBP21.08■□□□□ 0.97
TRAPPC4-203ENST00000447216 KLF18A0A0U1RQI7 1052 aa21.07■□□□□ 0.96
TRAPPC4-203ENST00000447216 USP17L10C9JJH3 530 aa21.07■□□□□ 0.96
TRAPPC4-203ENST00000447216 HTRA3P83110 453 aa21.07■□□□□ 0.96
TRAPPC4-203ENST00000447216 SPRYD7Q5W111 196 aa21.07■□□□□ 0.96
TRAPPC4-203ENST00000447216 ZNF654Q8IZM8 581 aa21.07■□□□□ 0.96
TRAPPC4-203ENST00000447216 FBXL16Q8N461 479 aa21.07■□□□□ 0.96
TRAPPC4-203ENST00000447216 TBC1D2Q9BYX2 928 aa21.07■□□□□ 0.96
TRAPPC4-203ENST00000447216 BAZ2BQ9UIF8 2168 aaKnown RBP21.07■□□□□ 0.96
TRAPPC4-203ENST00000447216 ST18O60284 1047 aa21.06■□□□□ 0.96
TRAPPC4-203ENST00000447216 RXRAP19793 462 aa21.06■□□□□ 0.96
TRAPPC4-203ENST00000447216 HMGCS2P54868 508 aa21.06■□□□□ 0.96
TRAPPC4-203ENST00000447216 BACE1P56817 501 aa21.06■□□□□ 0.96
TRAPPC4-203ENST00000447216 PAXIP1Q6ZW49 1069 aaPredicted RBP21.06■□□□□ 0.96
TRAPPC4-203ENST00000447216 SGMS1Q86VZ5 419 aa21.06■□□□□ 0.96
TRAPPC4-203ENST00000447216 SPICE1Q8N0Z3 855 aa21.06■□□□□ 0.96
TRAPPC4-203ENST00000447216 TMTC2Q8N394 836 aa21.06■□□□□ 0.96
TRAPPC4-203ENST00000447216 KIAA1683Q9H0B3 1180 aa21.06■□□□□ 0.96
TRAPPC4-203ENST00000447216 SH2D4AQ9H788 454 aa21.06■□□□□ 0.96
TRAPPC4-203ENST00000447216 VCPKMTQ9H867 229 aa21.06■□□□□ 0.96
TRAPPC4-203ENST00000447216 KCNH4Q9UQ05 1017 aa21.06■□□□□ 0.96
TRAPPC4-203ENST00000447216 F5H6K3 240 aa21.05■□□□□ 0.96
TRAPPC4-203ENST00000447216 NDUFB10O96000 172 aa21.05■□□□□ 0.96
TRAPPC4-203ENST00000447216 SLC10A3P09131 477 aa21.05■□□□□ 0.96
TRAPPC4-203ENST00000447216 KLRC3Q07444 240 aa21.05■□□□□ 0.96
TRAPPC4-203ENST00000447216 GRM1Q13255 1194 aa21.05■□□□□ 0.96
TRAPPC4-203ENST00000447216 SLFN13Q68D06 897 aa21.05■□□□□ 0.96
TRAPPC4-203ENST00000447216 APOA5Q6Q788 366 aa21.05■□□□□ 0.96
TRAPPC4-203ENST00000447216 CATIPQ7Z7H3 387 aa21.05■□□□□ 0.96
TRAPPC4-203ENST00000447216 GOPCQ9HD26 462 aa21.05■□□□□ 0.96
TRAPPC4-203ENST00000447216 TSHZ2Q9NRE2 1034 aa21.05■□□□□ 0.96
TRAPPC4-203ENST00000447216 EMILIN3Q9NT22 766 aa21.05■□□□□ 0.96
TRAPPC4-203ENST00000447216 TPCN1Q9ULQ1 816 aa21.05■□□□□ 0.96
TRAPPC4-203ENST00000447216 SLC12A7Q9Y666 1083 aa21.05■□□□□ 0.96
TRAPPC4-203ENST00000447216 PARP14Q460N5 1801 aa21.04■□□□□ 0.96
TRAPPC4-203ENST00000447216 GOLGA8BA8MQT2 603 aa21.04■□□□□ 0.96
TRAPPC4-203ENST00000447216 CXCL11O14625 94 aa21.04■□□□□ 0.96
TRAPPC4-203ENST00000447216 ANKRD1Q15327 319 aa21.04■□□□□ 0.96
TRAPPC4-203ENST00000447216 CYP4F22Q6NT55 531 aa21.04■□□□□ 0.96
TRAPPC4-203ENST00000447216 USP17L2Q6R6M4 530 aa21.04■□□□□ 0.96
TRAPPC4-203ENST00000447216 GADL1Q6ZQY3 521 aa21.04■□□□□ 0.96
TRAPPC4-203ENST00000447216 MICU3Q86XE3 530 aa21.04■□□□□ 0.96
TRAPPC4-203ENST00000447216 CCDC144CPQ8IYA2 1237 aa21.04■□□□□ 0.96
TRAPPC4-203ENST00000447216 GMCL1P1Q8NEA9 526 aa21.04■□□□□ 0.96
TRAPPC4-203ENST00000447216 NUP133Q8WUM0 1156 aa21.04■□□□□ 0.96
TRAPPC4-203ENST00000447216 NUP88Q99567 741 aaPredicted RBP21.04■□□□□ 0.96
TRAPPC4-203ENST00000447216 A0A0G2JLL6 359 aaPredicted RBP21.03■□□□□ 0.96
TRAPPC4-203ENST00000447216 FAM155AB1AL88 458 aaPredicted RBP21.03■□□□□ 0.96
TRAPPC4-203ENST00000447216 C19orf81C9J6K1 198 aa21.03■□□□□ 0.96
TRAPPC4-203ENST00000447216 LARGE1O95461 756 aa21.03■□□□□ 0.96
TRAPPC4-203ENST00000447216 USP14P54578 494 aa21.03■□□□□ 0.96
TRAPPC4-203ENST00000447216 C1QTNF8P60827 252 aa21.03■□□□□ 0.96
TRAPPC4-203ENST00000447216 STK3Q13188 491 aa21.03■□□□□ 0.96
TRAPPC4-203ENST00000447216 DEFB115Q30KQ5 88 aa21.03■□□□□ 0.96
TRAPPC4-203ENST00000447216 SYNE3Q6ZMZ3 975 aa21.03■□□□□ 0.96
TRAPPC4-203ENST00000447216 PRRT2Q7Z6L0 340 aaPredicted RBP21.03■□□□□ 0.96
TRAPPC4-203ENST00000447216 HHIPL1Q96JK4 782 aa21.03■□□□□ 0.96
TRAPPC4-203ENST00000447216 ISY1Q9ULR0 285 aaKnown RBP21.03■□□□□ 0.96
TRAPPC4-203ENST00000447216 SYNPO2Q9UMS6 1093 aa21.03■□□□□ 0.96
TRAPPC4-203ENST00000447216 MYH6P13533 1939 aa21.03■□□□□ 0.96
TRAPPC4-203ENST00000447216 RASSF10A6NK89 507 aa21.02■□□□□ 0.96
TRAPPC4-203ENST00000447216 ZBTB43O43298 467 aa21.02■□□□□ 0.96
TRAPPC4-203ENST00000447216 DDAH1O94760 285 aa21.02■□□□□ 0.96
TRAPPC4-203ENST00000447216 ZBTB48P10074 688 aaPredicted RBP21.02■□□□□ 0.96
TRAPPC4-203ENST00000447216 PDHBP11177 359 aa21.02■□□□□ 0.96
TRAPPC4-203ENST00000447216 PDIA3P30101 505 aaKnown RBP21.02■□□□□ 0.96
TRAPPC4-203ENST00000447216 TROAPQ12815 778 aa21.02■□□□□ 0.96
TRAPPC4-203ENST00000447216 SNAPC2Q13487 334 aa21.02■□□□□ 0.96
TRAPPC4-203ENST00000447216 CCDC96Q2M329 555 aa21.02■□□□□ 0.96
TRAPPC4-203ENST00000447216 SH3D19Q5HYK7 790 aa21.02■□□□□ 0.96
TRAPPC4-203ENST00000447216 TMOD4Q9NZQ9 345 aa21.02■□□□□ 0.96
TRAPPC4-203ENST00000447216 HPS5Q9UPZ3 1129 aa21.02■□□□□ 0.96
TRAPPC4-203ENST00000447216 FRMPD2Q68DX3 1309 aaPredicted RBP21.02■□□□□ 0.95
TRAPPC4-203ENST00000447216 GOLGA8HP0CJ92 632 aa21.01■□□□□ 0.95
TRAPPC4-203ENST00000447216 EVCP57679 992 aa21.01■□□□□ 0.95
TRAPPC4-203ENST00000447216 MOGSQ13724 837 aa21.01■□□□□ 0.95
TRAPPC4-203ENST00000447216 FAM83BQ5T0W9 1011 aa21.01■□□□□ 0.95
TRAPPC4-203ENST00000447216 KCTD1Q719H9 257 aa21.01■□□□□ 0.95
TRAPPC4-203ENST00000447216 DCAF4Q8WV16 495 aa21.01■□□□□ 0.95
TRAPPC4-203ENST00000447216 CCDC102AQ96A19 550 aa21.01■□□□□ 0.95
TRAPPC4-203ENST00000447216 MS4A4AQ96JQ5 239 aa21.01■□□□□ 0.95
TRAPPC4-203ENST00000447216 C12orf42Q96LP6 360 aa21.01■□□□□ 0.95
TRAPPC4-203ENST00000447216 GPCPD1Q9NPB8 672 aa21.01■□□□□ 0.95
TRAPPC4-203ENST00000447216 LIMCH1Q9UPQ0 1083 aa21.01■□□□□ 0.95
TRAPPC4-203ENST00000447216 RLFQ13129 1914 aa21.01■□□□□ 0.95
TRAPPC4-203ENST00000447216 CCL15-CCL14A0A0B4J2E2 113 aa21■□□□□ 0.95
TRAPPC4-203ENST00000447216 GOLGA8AA7E2F4 631 aa21■□□□□ 0.95
TRAPPC4-203ENST00000447216 SNHG28P0DPA3 235 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms