RNA–Protein interactions for RNA: ENST00000446989.1

LINC01054-201, Transcript of long intergenic non-protein coding RNA 1054, humanhuman

TSL 3 BASIC

Gene LINC01054, Length 514 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01054-201ENST00000446989 TRIM17Q9Y577 477 aa11.28□□□□□ -0.6
LINC01054-201ENST00000446989 PLXNB2O15031 1838 aa11.28□□□□□ -0.6
LINC01054-201ENST00000446989 ZNF213O14771 459 aa11.27□□□□□ -0.61
LINC01054-201ENST00000446989 RANBP6O60518 1105 aaKnown RBP11.27□□□□□ -0.61
LINC01054-201ENST00000446989 CAP1Q01518 475 aa11.27□□□□□ -0.61
LINC01054-201ENST00000446989 TFAP4Q01664 338 aa11.27□□□□□ -0.61
LINC01054-201ENST00000446989 KIF22Q14807 665 aa11.27□□□□□ -0.61
LINC01054-201ENST00000446989 KIAA1755Q5JYT7 1200 aa11.27□□□□□ -0.61
LINC01054-201ENST00000446989 OTOP1Q7RTM1 612 aa11.27□□□□□ -0.61
LINC01054-201ENST00000446989 SIAH1Q8IUQ4 282 aa11.27□□□□□ -0.61
LINC01054-201ENST00000446989 CEP95Q96GE4 821 aa11.27□□□□□ -0.61
LINC01054-201ENST00000446989 TANGO6Q9C0B7 1094 aa11.27□□□□□ -0.61
LINC01054-201ENST00000446989 NBPF3Q9H094 633 aa11.27□□□□□ -0.61
LINC01054-201ENST00000446989 VCPKMTQ9H867 229 aa11.27□□□□□ -0.61
LINC01054-201ENST00000446989 TMX2Q9Y320 296 aa11.27□□□□□ -0.61
LINC01054-201ENST00000446989 NEDD4P46934 1319 aa11.27□□□□□ -0.61
LINC01054-201ENST00000446989 IGKV6D-41A0A0C4DH26 115 aa11.26□□□□□ -0.61
LINC01054-201ENST00000446989 USP17L15C9J2P7 530 aa11.26□□□□□ -0.61
LINC01054-201ENST00000446989 USP17L13C9JLJ4 530 aa11.26□□□□□ -0.61
LINC01054-201ENST00000446989 USP17L11C9JVI0 530 aa11.26□□□□□ -0.61
LINC01054-201ENST00000446989 USP17L18D6R9N7 530 aa11.26□□□□□ -0.61
LINC01054-201ENST00000446989 USP17L22D6RA61 530 aa11.26□□□□□ -0.61
LINC01054-201ENST00000446989 USP17L17D6RBQ6 530 aa11.26□□□□□ -0.61
LINC01054-201ENST00000446989 USP17L19D6RCP7 530 aa11.26□□□□□ -0.61
LINC01054-201ENST00000446989 USP17L20D6RJB6 530 aa11.26□□□□□ -0.61
LINC01054-201ENST00000446989 SGSM2O43147 1006 aa11.26□□□□□ -0.61
LINC01054-201ENST00000446989 ORC4O43929 436 aa11.26□□□□□ -0.61
LINC01054-201ENST00000446989 NMT2O60551 498 aa11.26□□□□□ -0.61
LINC01054-201ENST00000446989 PEX10O60683 326 aa11.26□□□□□ -0.61
LINC01054-201ENST00000446989 BCRP11274 1271 aa11.26□□□□□ -0.61
LINC01054-201ENST00000446989 HOXA7P31268 230 aaPredicted RBP11.26□□□□□ -0.61
LINC01054-201ENST00000446989 HERVK_113P62684 666 aa11.26□□□□□ -0.61
LINC01054-201ENST00000446989 LACTBP83111 547 aaPredicted RBP11.26□□□□□ -0.61
LINC01054-201ENST00000446989 PTH1RQ03431 593 aa11.26□□□□□ -0.61
LINC01054-201ENST00000446989 USP17L24Q0WX57 530 aa11.26□□□□□ -0.61
LINC01054-201ENST00000446989 IMMTQ16891 758 aaKnown RBP11.26□□□□□ -0.61
LINC01054-201ENST00000446989 AKNAD1Q5T1N1 836 aa11.26□□□□□ -0.61
LINC01054-201ENST00000446989 MFSD6Q6ZSS7 791 aa11.26□□□□□ -0.61
LINC01054-201ENST00000446989 LRRC47Q8N1G4 583 aaKnown RBP11.26□□□□□ -0.61
LINC01054-201ENST00000446989 NEDD1Q8NHV4 660 aa11.26□□□□□ -0.61
LINC01054-201ENST00000446989 STAG1Q8WVM7 1258 aa11.26□□□□□ -0.61
LINC01054-201ENST00000446989 PAGR1Q9BTK6 254 aa11.26□□□□□ -0.61
LINC01054-201ENST00000446989 EFCC1Q9HA90 598 aa11.26□□□□□ -0.61
LINC01054-201ENST00000446989 GOPCQ9HD26 462 aa11.26□□□□□ -0.61
LINC01054-201ENST00000446989 CLIP2Q9UDT6 1046 aa11.26□□□□□ -0.61
LINC01054-201ENST00000446989 HTTP42858 3142 aa11.26□□□□□ -0.61
LINC01054-201ENST00000446989 FMNL1O95466 1100 aaPredicted RBP11.25□□□□□ -0.61
LINC01054-201ENST00000446989 TTLL1O95922 423 aa11.25□□□□□ -0.61
LINC01054-201ENST00000446989 PSMC4P43686 418 aa11.25□□□□□ -0.61
LINC01054-201ENST00000446989 FAM110CQ1W6H9 321 aa11.25□□□□□ -0.61
LINC01054-201ENST00000446989 CATSPERGQ6ZRH7 1159 aa11.25□□□□□ -0.61
LINC01054-201ENST00000446989 LPAR1Q92633 364 aa11.25□□□□□ -0.61
LINC01054-201ENST00000446989 CHMP4CQ96CF2 233 aa11.25□□□□□ -0.61
LINC01054-201ENST00000446989 P2RX7Q99572 595 aaKnown RBP11.25□□□□□ -0.61
LINC01054-201ENST00000446989 ESYT1Q9BSJ8 1104 aa11.25□□□□□ -0.61
LINC01054-201ENST00000446989 RNF41Q9H4P4 317 aaPredicted RBP11.25□□□□□ -0.61
LINC01054-201ENST00000446989 MTMR4Q9NYA4 1195 aa11.25□□□□□ -0.61
LINC01054-201ENST00000446989 NYAP2Q9P242 653 aa11.25□□□□□ -0.61
LINC01054-201ENST00000446989 CTNNA3Q9UI47 895 aa11.25□□□□□ -0.61
LINC01054-201ENST00000446989 ISY1Q9ULR0 285 aaKnown RBP11.25□□□□□ -0.61
LINC01054-201ENST00000446989 STX8Q9UNK0 236 aa11.25□□□□□ -0.61
LINC01054-201ENST00000446989 WDR46O15213 610 aaKnown RBP11.24□□□□□ -0.61
LINC01054-201ENST00000446989 CDC45O75419 566 aa11.24□□□□□ -0.61
LINC01054-201ENST00000446989 FLOT1O75955 427 aa11.24□□□□□ -0.61
LINC01054-201ENST00000446989 CTGFP29279 349 aa11.24□□□□□ -0.61
LINC01054-201ENST00000446989 GCLCP48506 637 aaPredicted RBP11.24□□□□□ -0.61
LINC01054-201ENST00000446989 ARHGEF6Q15052 776 aa11.24□□□□□ -0.61
LINC01054-201ENST00000446989 FAM83BQ5T0W9 1011 aa11.24□□□□□ -0.61
LINC01054-201ENST00000446989 CASC1Q6TDU7 716 aa11.24□□□□□ -0.61
LINC01054-201ENST00000446989 NKX2-3Q8TAU0 364 aa11.24□□□□□ -0.61
LINC01054-201ENST00000446989 ABHD8Q96I13 439 aa11.24□□□□□ -0.61
LINC01054-201ENST00000446989 TRIM47Q96LD4 638 aa11.24□□□□□ -0.61
LINC01054-201ENST00000446989 NUP88Q99567 741 aaPredicted RBP11.24□□□□□ -0.61
LINC01054-201ENST00000446989 ANO2Q9NQ90 1003 aa11.24□□□□□ -0.61
LINC01054-201ENST00000446989 MTMR7Q9Y216 660 aa11.24□□□□□ -0.61
LINC01054-201ENST00000446989 CENPFP49454 3210 aa11.24□□□□□ -0.61
LINC01054-201ENST00000446989 MYH6P13533 1939 aa11.23□□□□□ -0.61
LINC01054-201ENST00000446989 SPDYE16A6NNV3 312 aaPredicted RBP11.23□□□□□ -0.61
LINC01054-201ENST00000446989 B4E1Z4 1266 aa11.23□□□□□ -0.61
LINC01054-201ENST00000446989 F5H6K3 240 aa11.23□□□□□ -0.61
LINC01054-201ENST00000446989 TNPO2O14787 897 aaKnown RBP11.23□□□□□ -0.61
LINC01054-201ENST00000446989 NDUFB10O96000 172 aa11.23□□□□□ -0.61
LINC01054-201ENST00000446989 FGRP09769 529 aa11.23□□□□□ -0.61
LINC01054-201ENST00000446989 PCP11498 1178 aaKnown RBP11.23□□□□□ -0.61
LINC01054-201ENST00000446989 FCGRTP55899 365 aa11.23□□□□□ -0.61
LINC01054-201ENST00000446989 KLRC3Q07444 240 aa11.23□□□□□ -0.61
LINC01054-201ENST00000446989 PKN2Q16513 984 aaKnown RBP11.23□□□□□ -0.61
LINC01054-201ENST00000446989 FBXO46Q6PJ61 603 aaPredicted RBP11.23□□□□□ -0.61
LINC01054-201ENST00000446989 KIAA1211Q6ZU35 1233 aa11.23□□□□□ -0.61
LINC01054-201ENST00000446989 ESR2Q92731 530 aa11.23□□□□□ -0.61
LINC01054-201ENST00000446989 ZKSCAN3Q9BRR0 538 aa11.23□□□□□ -0.61
LINC01054-201ENST00000446989 TXNRD2Q9NNW7 524 aa11.23□□□□□ -0.61
LINC01054-201ENST00000446989 IL17RBQ9NRM6 502 aa11.23□□□□□ -0.61
LINC01054-201ENST00000446989 FBXO28Q9NVF7 368 aa11.23□□□□□ -0.61
LINC01054-201ENST00000446989 ZNFX1Q9P2E3 1918 aaKnown RBP11.23□□□□□ -0.61
LINC01054-201ENST00000446989 KDM4AO75164 1064 aa11.22□□□□□ -0.61
LINC01054-201ENST00000446989 ERVK-9P63128 1117 aa11.22□□□□□ -0.61
LINC01054-201ENST00000446989 ERVK-24P63145 666 aa11.22□□□□□ -0.61
LINC01054-201ENST00000446989 PPP4R3BQ5MIZ7 849 aa11.22□□□□□ -0.61
LINC01054-201ENST00000446989 RASGRP2Q7LDG7 609 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms