RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 FAM110CQ1W6H9 321 aa17.63■□□□□ 0.41
HDAC4-204ENST00000446876 CATSPERGQ6ZRH7 1159 aa17.63■□□□□ 0.41
HDAC4-204ENST00000446876 PAGR1Q9BTK6 254 aa17.63■□□□□ 0.41
HDAC4-204ENST00000446876 NBPF3Q9H094 633 aa17.63■□□□□ 0.41
HDAC4-204ENST00000446876 VCPKMTQ9H867 229 aa17.63■□□□□ 0.41
HDAC4-204ENST00000446876 ZNF287Q9HBT7 754 aa17.63■□□□□ 0.41
HDAC4-204ENST00000446876 ANAPC4Q9UJX5 808 aa17.63■□□□□ 0.41
HDAC4-204ENST00000446876 ZMYM6O95789 1325 aa17.63■□□□□ 0.41
HDAC4-204ENST00000446876 RAD21O60216 631 aa17.62■□□□□ 0.41
HDAC4-204ENST00000446876 TSPY3P0CV98 308 aa17.62■□□□□ 0.41
HDAC4-204ENST00000446876 TSPY8P0CW00 308 aa17.62■□□□□ 0.41
HDAC4-204ENST00000446876 CHMLP26374 656 aa17.62■□□□□ 0.41
HDAC4-204ENST00000446876 TFAP4Q01664 338 aa17.62■□□□□ 0.41
HDAC4-204ENST00000446876 CEP95Q96GE4 821 aa17.62■□□□□ 0.41
HDAC4-204ENST00000446876 TANGO6Q9C0B7 1094 aa17.62■□□□□ 0.41
HDAC4-204ENST00000446876 SH2D4AQ9H788 454 aa17.62■□□□□ 0.41
HDAC4-204ENST00000446876 PLIN4Q96Q06 1357 aa17.62■□□□□ 0.41
HDAC4-204ENST00000446876 HTTP42858 3142 aa17.62■□□□□ 0.41
HDAC4-204ENST00000446876 A0A0G2JMZ2 1700 aa17.61■□□□□ 0.41
HDAC4-204ENST00000446876 FCGRTP55899 365 aa17.61■□□□□ 0.41
HDAC4-204ENST00000446876 ARHGEF6Q15052 776 aa17.61■□□□□ 0.41
HDAC4-204ENST00000446876 TBC1D10CQ8IV04 446 aa17.61■□□□□ 0.41
HDAC4-204ENST00000446876 NEDD1Q8NHV4 660 aa17.61■□□□□ 0.41
HDAC4-204ENST00000446876 TOMM22Q9NS69 142 aa17.61■□□□□ 0.41
HDAC4-204ENST00000446876 RBPJLQ9UBG7 517 aa17.61■□□□□ 0.41
HDAC4-204ENST00000446876 COL11A1P12107 1806 aaPredicted RBP17.61■□□□□ 0.41
HDAC4-204ENST00000446876 SPDYE16A6NNV3 312 aaPredicted RBP17.6■□□□□ 0.41
HDAC4-204ENST00000446876 CNMDO75829 334 aa17.6■□□□□ 0.41
HDAC4-204ENST00000446876 PRKCZQ05513 592 aa17.6■□□□□ 0.41
HDAC4-204ENST00000446876 RRP12Q5JTH9 1297 aaKnown RBP17.6■□□□□ 0.41
HDAC4-204ENST00000446876 SAMD1Q6SPF0 538 aaPredicted RBP17.6■□□□□ 0.41
HDAC4-204ENST00000446876 LRRC47Q8N1G4 583 aaKnown RBP17.6■□□□□ 0.41
HDAC4-204ENST00000446876 NKX2-3Q8TAU0 364 aa17.6■□□□□ 0.41
HDAC4-204ENST00000446876 NYAP2Q9P242 653 aa17.6■□□□□ 0.41
HDAC4-204ENST00000446876 MORF4L1Q9UBU8 362 aa17.6■□□□□ 0.41
HDAC4-204ENST00000446876 CLIP2Q9UDT6 1046 aa17.6■□□□□ 0.41
HDAC4-204ENST00000446876 SRRDQ9UH36 339 aa17.6■□□□□ 0.41
HDAC4-204ENST00000446876 GABRQQ9UN88 632 aa17.6■□□□□ 0.41
HDAC4-204ENST00000446876 MYPNQ86TC9 1320 aa17.6■□□□□ 0.41
HDAC4-204ENST00000446876 PLXNB2O15031 1838 aa17.6■□□□□ 0.41
HDAC4-204ENST00000446876 RAD50Q92878 1312 aa17.59■□□□□ 0.41
HDAC4-204ENST00000446876 TSPY2A6NKD2 308 aa17.59■□□□□ 0.41
HDAC4-204ENST00000446876 TNPO2O14787 897 aaKnown RBP17.59■□□□□ 0.41
HDAC4-204ENST00000446876 RANBP6O60518 1105 aaKnown RBP17.59■□□□□ 0.41
HDAC4-204ENST00000446876 NMT2O60551 498 aa17.59■□□□□ 0.41
HDAC4-204ENST00000446876 Q3C1V9 767 aa17.59■□□□□ 0.41
HDAC4-204ENST00000446876 LPAR1Q92633 364 aa17.59■□□□□ 0.41
HDAC4-204ENST00000446876 NUP88Q99567 741 aaPredicted RBP17.59■□□□□ 0.41
HDAC4-204ENST00000446876 DSCC1Q9BVC3 393 aa17.59■□□□□ 0.41
HDAC4-204ENST00000446876 GOPCQ9HD26 462 aa17.59■□□□□ 0.41
HDAC4-204ENST00000446876 MTMR4Q9NYA4 1195 aa17.59■□□□□ 0.41
HDAC4-204ENST00000446876 NEDD4P46934 1319 aa17.58■□□□□ 0.4
HDAC4-204ENST00000446876 WDR46O15213 610 aaKnown RBP17.58■□□□□ 0.4
HDAC4-204ENST00000446876 ORC4O43929 436 aa17.58■□□□□ 0.4
HDAC4-204ENST00000446876 GNRH1P01148 92 aa17.58■□□□□ 0.4
HDAC4-204ENST00000446876 FGRP09769 529 aa17.58■□□□□ 0.4
HDAC4-204ENST00000446876 SOX10P56693 466 aa17.58■□□□□ 0.4
HDAC4-204ENST00000446876 ERVK-9P63128 1117 aa17.58■□□□□ 0.4
HDAC4-204ENST00000446876 ERVK-24P63145 666 aa17.58■□□□□ 0.4
HDAC4-204ENST00000446876 FAM83BQ5T0W9 1011 aa17.58■□□□□ 0.4
HDAC4-204ENST00000446876 GPRC5AQ8NFJ5 357 aa17.58■□□□□ 0.4
HDAC4-204ENST00000446876 IL17RBQ9NRM6 502 aa17.58■□□□□ 0.4
HDAC4-204ENST00000446876 FBXO28Q9NVF7 368 aa17.58■□□□□ 0.4
HDAC4-204ENST00000446876 BTBD7Q9P203 1132 aa17.58■□□□□ 0.4
HDAC4-204ENST00000446876 FLOT1O75955 427 aa17.57■□□□□ 0.4
HDAC4-204ENST00000446876 TTLL1O95922 423 aa17.57■□□□□ 0.4
HDAC4-204ENST00000446876 NDUFB10O96000 172 aa17.57■□□□□ 0.4
HDAC4-204ENST00000446876 PTH1RQ03431 593 aa17.57■□□□□ 0.4
HDAC4-204ENST00000446876 AKNAD1Q5T1N1 836 aa17.57■□□□□ 0.4
HDAC4-204ENST00000446876 SH3TC2Q8TF17 1288 aa17.57■□□□□ 0.4
HDAC4-204ENST00000446876 GTF3C2Q8WUA4 911 aaPredicted RBP17.57■□□□□ 0.4
HDAC4-204ENST00000446876 STAG1Q8WVM7 1258 aa17.57■□□□□ 0.4
HDAC4-204ENST00000446876 RUFY2Q8WXA3 655 aa17.57■□□□□ 0.4
HDAC4-204ENST00000446876 CHMP4CQ96CF2 233 aa17.57■□□□□ 0.4
HDAC4-204ENST00000446876 ATG4CQ96DT6 458 aa17.57■□□□□ 0.4
HDAC4-204ENST00000446876 PORCNQ9H237 461 aa17.57■□□□□ 0.4
HDAC4-204ENST00000446876 F5H6K3 240 aa17.56■□□□□ 0.4
HDAC4-204ENST00000446876 ZNF213O14771 459 aa17.56■□□□□ 0.4
HDAC4-204ENST00000446876 HOXD10P28358 340 aa17.56■□□□□ 0.4
HDAC4-204ENST00000446876 FLT3LGP49771 235 aa17.56■□□□□ 0.4
HDAC4-204ENST00000446876 KLRC3Q07444 240 aa17.56■□□□□ 0.4
HDAC4-204ENST00000446876 COG2Q14746 738 aa17.56■□□□□ 0.4
HDAC4-204ENST00000446876 SLC9C1Q4G0N8 1177 aa17.56■□□□□ 0.4
HDAC4-204ENST00000446876 MFSD6Q6ZSS7 791 aa17.56■□□□□ 0.4
HDAC4-204ENST00000446876 RAET1EQ8TD07 263 aa17.56■□□□□ 0.4
HDAC4-204ENST00000446876 RABGAP1Q9Y3P9 1069 aa17.56■□□□□ 0.4
HDAC4-204ENST00000446876 SGSM2O43147 1006 aa17.55■□□□□ 0.4
HDAC4-204ENST00000446876 MYCP01106 439 aaPredicted RBP17.55■□□□□ 0.4
HDAC4-204ENST00000446876 DSG3P32926 999 aa17.55■□□□□ 0.4
HDAC4-204ENST00000446876 PRMT2P55345 433 aa17.55■□□□□ 0.4
HDAC4-204ENST00000446876 LBX2Q6XYB7 198 aa17.55■□□□□ 0.4
HDAC4-204ENST00000446876 RASGRP2Q7LDG7 609 aa17.55■□□□□ 0.4
HDAC4-204ENST00000446876 MKL1Q969V6 931 aa17.55■□□□□ 0.4
HDAC4-204ENST00000446876 COA7Q96BR5 231 aa17.55■□□□□ 0.4
HDAC4-204ENST00000446876 STX8Q9UNK0 236 aa17.55■□□□□ 0.4
HDAC4-204ENST00000446876 IMMTQ16891 758 aaKnown RBP17.54■□□□□ 0.4
HDAC4-204ENST00000446876 BMP2KLQ5H9B9 411 aa17.54■□□□□ 0.4
HDAC4-204ENST00000446876 ARMC5Q96C12 935 aa17.54■□□□□ 0.4
HDAC4-204ENST00000446876 CENPFP49454 3210 aa17.53■□□□□ 0.4
HDAC4-204ENST00000446876 ELNP15502 786 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms