RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 METTL3Q86U44 580 aaKnown RBP8.89□□□□□ -0.99
HDAC9-216ENST00000446646 P2RX7Q99572 595 aaKnown RBP8.89□□□□□ -0.99
HDAC9-216ENST00000446646 NUDT12Q9BQG2 462 aa8.89□□□□□ -0.99
HDAC9-216ENST00000446646 PRR14Q9BWN1 585 aa8.89□□□□□ -0.99
HDAC9-216ENST00000446646 DDX4Q9NQI0 724 aaKnown RBP8.89□□□□□ -0.99
HDAC9-216ENST00000446646 USP40Q9NVE5 1235 aa8.89□□□□□ -0.99
HDAC9-216ENST00000446646 PRRC2BQ5JSZ5 2229 aaKnown RBP8.89□□□□□ -0.99
HDAC9-216ENST00000446646 RFX7Q2KHR2 1363 aa8.88□□□□□ -0.99
HDAC9-216ENST00000446646 DNM1LO00429 736 aa8.88□□□□□ -0.99
HDAC9-216ENST00000446646 PRDX5P30044 214 aa8.88□□□□□ -0.99
HDAC9-216ENST00000446646 GCLCP48506 637 aaPredicted RBP8.88□□□□□ -0.99
HDAC9-216ENST00000446646 JAG1P78504 1218 aa8.88□□□□□ -0.99
HDAC9-216ENST00000446646 LRRC24Q50LG9 513 aa8.88□□□□□ -0.99
HDAC9-216ENST00000446646 TAF7LQ5H9L4 462 aa8.88□□□□□ -0.99
HDAC9-216ENST00000446646 TMEM31Q5JXX7 168 aa8.88□□□□□ -0.99
HDAC9-216ENST00000446646 TBC1D22AQ8WUA7 517 aa8.88□□□□□ -0.99
HDAC9-216ENST00000446646 ZNF516Q92618 1163 aa8.88□□□□□ -0.99
HDAC9-216ENST00000446646 FERMT2Q96AC1 680 aa8.88□□□□□ -0.99
HDAC9-216ENST00000446646 PBX4Q9BYU1 374 aa8.88□□□□□ -0.99
HDAC9-216ENST00000446646 RBPJLQ9UBG7 517 aa8.88□□□□□ -0.99
HDAC9-216ENST00000446646 DDX20Q9UHI6 824 aaKnown RBP8.88□□□□□ -0.99
HDAC9-216ENST00000446646 FRMPD3Q5JV73 1810 aa8.88□□□□□ -0.99
HDAC9-216ENST00000446646 RLFQ13129 1914 aa8.88□□□□□ -0.99
HDAC9-216ENST00000446646 F6X3S4 739 aa8.87□□□□□ -0.99
HDAC9-216ENST00000446646 FRAT2O75474 233 aaPredicted RBP8.87□□□□□ -0.99
HDAC9-216ENST00000446646 IGFBP4P22692 258 aa8.87□□□□□ -0.99
HDAC9-216ENST00000446646 CYP2C19P33261 490 aa8.87□□□□□ -0.99
HDAC9-216ENST00000446646 TLE2Q04725 743 aa8.87□□□□□ -0.99
HDAC9-216ENST00000446646 SNX17Q15036 470 aa8.87□□□□□ -0.99
HDAC9-216ENST00000446646 WDR43Q15061 677 aaKnown RBP eCLIP8.87□□□□□ -0.99
HDAC9-216ENST00000446646 C16orf59Q7L2K0 433 aa8.87□□□□□ -0.99
HDAC9-216ENST00000446646 GPR142Q7Z601 462 aa8.87□□□□□ -0.99
HDAC9-216ENST00000446646 VPS37DQ86XT2 251 aa8.87□□□□□ -0.99
HDAC9-216ENST00000446646 VGLL2Q8N8G2 317 aa8.87□□□□□ -0.99
HDAC9-216ENST00000446646 PROCA1Q8NCQ7 364 aaPredicted RBP8.87□□□□□ -0.99
HDAC9-216ENST00000446646 DNAAF4Q8WXU2 420 aa8.87□□□□□ -0.99
HDAC9-216ENST00000446646 LPAR1Q92633 364 aa8.87□□□□□ -0.99
HDAC9-216ENST00000446646 TSR2Q969E8 191 aaKnown RBP8.87□□□□□ -0.99
HDAC9-216ENST00000446646 RUNDC1Q96C34 613 aa8.87□□□□□ -0.99
HDAC9-216ENST00000446646 KAZALD1Q96I82 304 aa8.87□□□□□ -0.99
HDAC9-216ENST00000446646 PRKRIP1Q9H875 184 aaPredicted RBP8.87□□□□□ -0.99
HDAC9-216ENST00000446646 CD320Q9NPF0 282 aa8.87□□□□□ -0.99
HDAC9-216ENST00000446646 IFT57Q9NWB7 429 aa8.87□□□□□ -0.99
HDAC9-216ENST00000446646 LRRFIP2Q9Y608 721 aaKnown RBP8.87□□□□□ -0.99
HDAC9-216ENST00000446646 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.86□□□□□ -0.99
HDAC9-216ENST00000446646 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.86□□□□□ -0.99
HDAC9-216ENST00000446646 CTNND1O60716 968 aaKnown RBP8.86□□□□□ -0.99
HDAC9-216ENST00000446646 IGHA2P01877 340 aa8.86□□□□□ -0.99
HDAC9-216ENST00000446646 CFHP08603 1231 aa8.86□□□□□ -0.99
HDAC9-216ENST00000446646 CNGA1P29973 690 aa8.86□□□□□ -0.99
HDAC9-216ENST00000446646 RGS2P41220 211 aa8.86□□□□□ -0.99
HDAC9-216ENST00000446646 ADCYAP1R1P41586 468 aa8.86□□□□□ -0.99
HDAC9-216ENST00000446646 FLIIQ13045 1269 aa8.86□□□□□ -0.99
HDAC9-216ENST00000446646 CCDC57Q2TAC2 916 aa8.86□□□□□ -0.99
HDAC9-216ENST00000446646 MICALL1Q8N3F8 863 aa8.86□□□□□ -0.99
HDAC9-216ENST00000446646 ZNF280CQ8ND82 737 aa8.86□□□□□ -0.99
HDAC9-216ENST00000446646 GPRC5AQ8NFJ5 357 aa8.86□□□□□ -0.99
HDAC9-216ENST00000446646 LINS1Q8NG48 757 aa8.86□□□□□ -0.99
HDAC9-216ENST00000446646 NPLOC4Q8TAT6 608 aa8.86□□□□□ -0.99
HDAC9-216ENST00000446646 KLHDC4Q8TBB5 520 aa8.86□□□□□ -0.99
HDAC9-216ENST00000446646 SOCS4Q8WXH5 440 aa8.86□□□□□ -0.99
HDAC9-216ENST00000446646 ANKS1AQ92625 1134 aa8.86□□□□□ -0.99
HDAC9-216ENST00000446646 GAS2L1Q99501 681 aaPredicted RBP8.86□□□□□ -0.99
HDAC9-216ENST00000446646 APBA2Q99767 749 aa8.86□□□□□ -0.99
HDAC9-216ENST00000446646 CXXC1Q9P0U4 656 aaPredicted RBP8.86□□□□□ -0.99
HDAC9-216ENST00000446646 PCDHB3Q9Y5E6 796 aa8.86□□□□□ -0.99
HDAC9-216ENST00000446646 LOC285556D6RIA3 1793 aa8.86□□□□□ -0.99
HDAC9-216ENST00000446646 DOCK1Q14185 1865 aa8.85□□□□□ -0.99
HDAC9-216ENST00000446646 CNMDO75829 334 aa8.85□□□□□ -0.99
HDAC9-216ENST00000446646 HERVK_113P62684 666 aa8.85□□□□□ -0.99
HDAC9-216ENST00000446646 KMT5BQ4FZB7 885 aa8.85□□□□□ -0.99
HDAC9-216ENST00000446646 PLEKHH3Q7Z736 793 aa8.85□□□□□ -0.99
HDAC9-216ENST00000446646 ZSCAN29Q8IWY8 852 aaPredicted RBP8.85□□□□□ -0.99
HDAC9-216ENST00000446646 IL27Q8NEV9 243 aa8.85□□□□□ -0.99
HDAC9-216ENST00000446646 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.85□□□□□ -0.99
HDAC9-216ENST00000446646 PAGR1Q9BTK6 254 aa8.85□□□□□ -0.99
HDAC9-216ENST00000446646 MYH16Q9H6N6 1097 aa8.85□□□□□ -0.99
HDAC9-216ENST00000446646 ADAMTS8Q9UP79 889 aa8.85□□□□□ -0.99
HDAC9-216ENST00000446646 EPG5Q9HCE0 2579 aa8.85□□□□□ -0.99
HDAC9-216ENST00000446646 DNAH14Q0VDD8 3507 aa8.85□□□□□ -0.99
HDAC9-216ENST00000446646 VPS13AQ96RL7 3174 aa8.85□□□□□ -0.99
HDAC9-216ENST00000446646 MAST3O60307 1309 aa8.84□□□□□ -0.99
HDAC9-216ENST00000446646 GNAI1P63096 354 aa8.84□□□□□ -0.99
HDAC9-216ENST00000446646 ERVK-9P63128 1117 aa8.84□□□□□ -0.99
HDAC9-216ENST00000446646 ERVK-24P63145 666 aa8.84□□□□□ -0.99
HDAC9-216ENST00000446646 PICALMQ13492 652 aa8.84□□□□□ -0.99
HDAC9-216ENST00000446646 MTMR2Q13614 643 aa8.84□□□□□ -0.99
HDAC9-216ENST00000446646 AMHR2Q16671 573 aa8.84□□□□□ -0.99
HDAC9-216ENST00000446646 BEND3Q5T5X7 828 aa8.84□□□□□ -0.99
HDAC9-216ENST00000446646 KRT40Q6A162 431 aa8.84□□□□□ -0.99
HDAC9-216ENST00000446646 NLRP7Q8WX94 980 aa8.84□□□□□ -0.99
HDAC9-216ENST00000446646 SUCLG2Q96I99 432 aa8.84□□□□□ -0.99
HDAC9-216ENST00000446646 PHOX2BQ99453 314 aa8.84□□□□□ -0.99
HDAC9-216ENST00000446646 IDI2Q9BXS1 227 aa8.84□□□□□ -0.99
HDAC9-216ENST00000446646 YBX2Q9Y2T7 364 aaKnown RBP8.84□□□□□ -0.99
HDAC9-216ENST00000446646 SUGT1Q9Y2Z0 365 aa8.84□□□□□ -0.99
HDAC9-216ENST00000446646 DOCK2Q92608 1830 aa8.84□□□□□ -0.99
HDAC9-216ENST00000446646 CACNA1HO95180 2353 aa8.84□□□□□ -0.99
HDAC9-216ENST00000446646 PTPRZ1P23471 2315 aaPredicted RBP8.83□□□□□ -1
HDAC9-216ENST00000446646 UTYO14607 1347 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms