RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 A0A0G2JMZ2 1700 aa12.81□□□□□ -0.36
HDAC8-215ENST00000444609 ELP1O95163 1332 aa12.81□□□□□ -0.36
HDAC8-215ENST00000444609 USP17L15C9J2P7 530 aa12.8□□□□□ -0.36
HDAC8-215ENST00000444609 USP17L13C9JLJ4 530 aa12.8□□□□□ -0.36
HDAC8-215ENST00000444609 USP17L11C9JVI0 530 aa12.8□□□□□ -0.36
HDAC8-215ENST00000444609 USP17L18D6R9N7 530 aa12.8□□□□□ -0.36
HDAC8-215ENST00000444609 USP17L22D6RA61 530 aa12.8□□□□□ -0.36
HDAC8-215ENST00000444609 USP17L17D6RBQ6 530 aa12.8□□□□□ -0.36
HDAC8-215ENST00000444609 USP17L19D6RCP7 530 aa12.8□□□□□ -0.36
HDAC8-215ENST00000444609 USP17L20D6RJB6 530 aa12.8□□□□□ -0.36
HDAC8-215ENST00000444609 ASNSP08243 561 aa12.8□□□□□ -0.36
HDAC8-215ENST00000444609 TAP1Q03518 808 aa12.8□□□□□ -0.36
HDAC8-215ENST00000444609 USP17L24Q0WX57 530 aa12.8□□□□□ -0.36
HDAC8-215ENST00000444609 PKN1Q16512 942 aa12.8□□□□□ -0.36
HDAC8-215ENST00000444609 PUS10Q3MIT2 529 aaKnown RBP12.8□□□□□ -0.36
HDAC8-215ENST00000444609 LRRC24Q50LG9 513 aa12.8□□□□□ -0.36
HDAC8-215ENST00000444609 CCSAPQ6IQ19 270 aaPredicted RBP12.8□□□□□ -0.36
HDAC8-215ENST00000444609 LBX2Q6XYB7 198 aa12.8□□□□□ -0.36
HDAC8-215ENST00000444609 FAM126BQ8IXS8 530 aa12.8□□□□□ -0.36
HDAC8-215ENST00000444609 CCDC146Q8IYE0 955 aa12.8□□□□□ -0.36
HDAC8-215ENST00000444609 TSPYL6Q8N831 410 aa12.8□□□□□ -0.36
HDAC8-215ENST00000444609 C19orf67A6NJJ6 358 aa12.79□□□□□ -0.36
HDAC8-215ENST00000444609 IFIT1P09914 478 aaKnown RBP12.79□□□□□ -0.36
HDAC8-215ENST00000444609 FGFR2P21802 821 aa12.79□□□□□ -0.36
HDAC8-215ENST00000444609 GNAI1P63096 354 aa12.79□□□□□ -0.36
HDAC8-215ENST00000444609 KCNA10Q16322 511 aa12.79□□□□□ -0.36
HDAC8-215ENST00000444609 USP17L2Q6R6M4 530 aa12.79□□□□□ -0.36
HDAC8-215ENST00000444609 KLHDC9Q8NEP7 349 aa12.79□□□□□ -0.36
HDAC8-215ENST00000444609 FAM163AQ96GL9 167 aaPredicted RBP12.79□□□□□ -0.36
HDAC8-215ENST00000444609 IRF2BPLQ9H1B7 796 aa12.79□□□□□ -0.36
HDAC8-215ENST00000444609 ALG13Q9NP73 1137 aaKnown RBP12.79□□□□□ -0.36
HDAC8-215ENST00000444609 SLC5A4Q9NY91 659 aa12.79□□□□□ -0.36
HDAC8-215ENST00000444609 EPG5Q9HCE0 2579 aa12.79□□□□□ -0.36
HDAC8-215ENST00000444609 SALL1Q9NSC2 1324 aa12.79□□□□□ -0.36
HDAC8-215ENST00000444609 PROB1E7EW31 1015 aa12.78□□□□□ -0.36
HDAC8-215ENST00000444609 ARVCFO00192 962 aa12.78□□□□□ -0.36
HDAC8-215ENST00000444609 ARHGEF15O94989 841 aa12.78□□□□□ -0.36
HDAC8-215ENST00000444609 ZP2Q05996 745 aa12.78□□□□□ -0.36
HDAC8-215ENST00000444609 TRIM26Q12899 539 aaPredicted RBP12.78□□□□□ -0.36
HDAC8-215ENST00000444609 CATSPERGQ6ZRH7 1159 aa12.78□□□□□ -0.36
HDAC8-215ENST00000444609 ASCL5Q7RTU5 278 aa12.78□□□□□ -0.36
HDAC8-215ENST00000444609 ATOH1Q92858 354 aaPredicted RBP12.78□□□□□ -0.36
HDAC8-215ENST00000444609 MAML3Q96JK9 1138 aa12.78□□□□□ -0.36
HDAC8-215ENST00000444609 GLT1D1Q96MS3 346 aa12.78□□□□□ -0.36
HDAC8-215ENST00000444609 UPF3BQ9BZI7 483 aaKnown RBP12.78□□□□□ -0.36
HDAC8-215ENST00000444609 HERC5Q9UII4 1024 aaKnown RBP12.78□□□□□ -0.36
HDAC8-215ENST00000444609 ZNF536O15090 1300 aa12.78□□□□□ -0.36
HDAC8-215ENST00000444609 KMT2BQ9UMN6 2715 aaPredicted RBP12.77□□□□□ -0.36
HDAC8-215ENST00000444609 PKD1L2Q7Z442 2459 aa12.77□□□□□ -0.37
HDAC8-215ENST00000444609 MED19A0JLT2 244 aaPredicted RBP12.77□□□□□ -0.37
HDAC8-215ENST00000444609 ZBBXA8MT70 800 aa12.77□□□□□ -0.37
HDAC8-215ENST00000444609 TLR3O15455 904 aaKnown RBP12.77□□□□□ -0.37
HDAC8-215ENST00000444609 CD4P01730 458 aa12.77□□□□□ -0.37
HDAC8-215ENST00000444609 BTDP43251 543 aa12.77□□□□□ -0.37
HDAC8-215ENST00000444609 RHBDL3P58872 404 aa12.77□□□□□ -0.37
HDAC8-215ENST00000444609 FLIIQ13045 1269 aa12.77□□□□□ -0.37
HDAC8-215ENST00000444609 PUM3Q15397 648 aaKnown RBP12.77□□□□□ -0.37
HDAC8-215ENST00000444609 RPUSD2Q8IZ73 545 aaKnown RBP12.77□□□□□ -0.37
HDAC8-215ENST00000444609 COL26A1Q96A83 441 aa12.77□□□□□ -0.37
HDAC8-215ENST00000444609 VWCEQ96DN2 955 aa12.77□□□□□ -0.37
HDAC8-215ENST00000444609 MOV10L1Q9BXT6 1211 aaKnown RBP12.77□□□□□ -0.37
HDAC8-215ENST00000444609 PRKAG3Q9UGI9 489 aa12.77□□□□□ -0.37
HDAC8-215ENST00000444609 BAHCC1Q9P281 2608 aa12.77□□□□□ -0.37
HDAC8-215ENST00000444609 ROBO3Q96MS0 1386 aa12.77□□□□□ -0.37
HDAC8-215ENST00000444609 GBF1Q92538 1859 aa12.76□□□□□ -0.37
HDAC8-215ENST00000444609 GRM8O00222 908 aa12.76□□□□□ -0.37
HDAC8-215ENST00000444609 TAL1P17542 331 aaPredicted RBP12.76□□□□□ -0.37
HDAC8-215ENST00000444609 FKBP5Q13451 457 aaPredicted RBP12.76□□□□□ -0.37
HDAC8-215ENST00000444609 HERC4Q5GLZ8 1057 aaPredicted RBP12.76□□□□□ -0.37
HDAC8-215ENST00000444609 PBXIP1Q96AQ6 731 aa12.76□□□□□ -0.37
HDAC8-215ENST00000444609 LENG1Q96BZ8 264 aaPredicted RBP12.76□□□□□ -0.37
HDAC8-215ENST00000444609 RUNDC1Q96C34 613 aa12.76□□□□□ -0.37
HDAC8-215ENST00000444609 C12orf42Q96LP6 360 aa12.76□□□□□ -0.37
HDAC8-215ENST00000444609 HIPK3Q9H422 1215 aa12.76□□□□□ -0.37
HDAC8-215ENST00000444609 GINM1Q9NU53 330 aa12.76□□□□□ -0.37
HDAC8-215ENST00000444609 TRPC6Q9Y210 931 aa12.76□□□□□ -0.37
HDAC8-215ENST00000444609 UMODL1Q5DID0 1318 aa12.76□□□□□ -0.37
HDAC8-215ENST00000444609 CLSPNQ9HAW4 1339 aa12.76□□□□□ -0.37
HDAC8-215ENST00000444609 BRWD1Q9NSI6 2320 aa12.76□□□□□ -0.37
HDAC8-215ENST00000444609 CHD8Q9HCK8 2581 aa12.76□□□□□ -0.37
HDAC8-215ENST00000444609 GPR75-ASB3A0A0A6YYF3 556 aa12.75□□□□□ -0.37
HDAC8-215ENST00000444609 ZNF865P0CJ78 1059 aaPredicted RBP12.75□□□□□ -0.37
HDAC8-215ENST00000444609 AKR1A1P14550 325 aa12.75□□□□□ -0.37
HDAC8-215ENST00000444609 IRS1P35568 1242 aa12.75□□□□□ -0.37
HDAC8-215ENST00000444609 CCL23P55773 120 aa12.75□□□□□ -0.37
HDAC8-215ENST00000444609 SHROOM1Q2M3G4 852 aaPredicted RBP12.75□□□□□ -0.37
HDAC8-215ENST00000444609 BEND3Q5T5X7 828 aa12.75□□□□□ -0.37
HDAC8-215ENST00000444609 SLF2Q8IX21 1173 aa12.75□□□□□ -0.37
HDAC8-215ENST00000444609 ABRAQ8N0Z2 381 aa12.75□□□□□ -0.37
HDAC8-215ENST00000444609 SHCBP1Q8NEM2 672 aa12.75□□□□□ -0.37
HDAC8-215ENST00000444609 NEK9Q8TD19 979 aa12.75□□□□□ -0.37
HDAC8-215ENST00000444609 EDAQ92838 391 aa12.75□□□□□ -0.37
HDAC8-215ENST00000444609 CNTNAP3BQ96NU0 1288 aa12.75□□□□□ -0.37
HDAC8-215ENST00000444609 CNTNAP3Q9BZ76 1288 aa12.75□□□□□ -0.37
HDAC8-215ENST00000444609 SYNRGQ9UMZ2 1314 aa12.75□□□□□ -0.37
HDAC8-215ENST00000444609 A0A0U1RQG5 324 aaPredicted RBP12.74□□□□□ -0.37
HDAC8-215ENST00000444609 SPDYE16A6NNV3 312 aaPredicted RBP12.74□□□□□ -0.37
HDAC8-215ENST00000444609 ERCC3P19447 782 aa12.74□□□□□ -0.37
HDAC8-215ENST00000444609 TTLL4Q14679 1199 aa12.74□□□□□ -0.37
HDAC8-215ENST00000444609 SPRED2Q7Z698 418 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms